FT source 1..6397126 FT /organism="Pseudomonas syringae pv. tomato str. DC3000" FT /strain="DC3000" FT /note="this feature table specifies genes and coding FT sequences for mobile genetic elements" FT source 1..6397126 FT /organism="Pseudomonas syringae pv. tomato str. DC3000" FT /strain="DC3000" FT /note="this feature table specifies genes and coding FT sequences implicated in siderophore biosynthesis" FT source 1..6397126 FT /organism="Pseudomonas syringae pv. tomato str. DC3000" FT /strain="DC3000" FT /note="this feature table specifies genes and coding FT sequences for diffusible toxins including those implicated FT in coranatine biosynthesis and iaa synthesis or encoding FT predicted non-ribosomal peptide synthetases (NRPS)" FT source 1..6397126 FT /organism="Pseudomonas syringae pv. tomato str. DC3000" FT /strain="DC3000" FT /note="this feature table specifies genes and coding FT sequences involved in synthesis of cell-wall associated FT virulence factors and flagella" FT VR_#1 1..83363 FT /colour=255 255 0 FT CDS complement(14512..15741) FT /gene="PSPTO0009" FT /note="similar to GP:14488264, GB:J03507, GB:X77354, FT GB:X77344, GB:X77353, GB:X77355, GB:X77356, GB:X77357, FT GB:X77358, GB:X77359, GB:X77360, GB:X77345, GB:X77346, FT GB:X77347, GB:X77348, GB:X77349, GB:X77350, GB:X77351, FT GB:X77352, GB:X86328, GB:X86338, GB:X86339, GB:X86340, FT GB:X86341, GB:X86342, GB:X86343, GB:X86344, GB:X86329, FT GB:X86330, GB:X86331, GB:X86332, GB:X86333, GB:X86334, FT GB:X86335, GB:X86336, GB:X86337, SP:P10643, PID:179716, FT and PID:899271; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy3, transposase" FT /protein_id="AAO53566.1" FT /db_xref="GI:28850486" FT /translation="MKPAYPPLLLQMSPAYTPRPLKNLFTANQCWAHLIEEGGLRDIE FT VESVTKMLACGTSILGVKHYTCGNHSCPHVKYLCNTCSCRACPSCGKKATDQWIANQQ FT HRLPECTWQHLVFTLPDTLWPLFFHNRHWLDALCRLAVDNLLYAGRRRGVEVGVFCAI FT HTYGRRLNWHPHIHVSVTLGGIDDAGVWKDLSFHPSALRRRWMWNVRQYLLSQWEHTT FT VPPENAHLQSENDWRHLVLNAGGQHWHIHLSKKTKNGKKTVNYLGRYLKKPPISGSRL FT AHYTSGATLSFTYLDHRTKTYQQETLSQTDMLRRVVQHIPEKHFRMIRYFGFLANRVC FT GRQLPRVYEAIRMERRGKAPKLYFAQMSKAFLHRDPFSCVLCGARMVYTAAIAGLTVQ FT GLINNAQSIAQLRYVPA" FT /colour=178 58 238 FT MBL complement(14512..15741) FT /gene="PSPTO0009" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:14488264, GB:J03507, GB:X77354, FT GB:X77344, GB:X77353, GB:X77355, GB:X77356, GB:X77357, FT GB:X77358, GB:X77359, GB:X77360, GB:X77345, GB:X77346, FT GB:X77347, GB:X77348, GB:X77349, GB:X77350, GB:X77351, FT GB:X77352, GB:X86328, GB:X86338, GB:X86339, GB:X86340, FT GB:X86341, GB:X86342, GB:X86343, GB:X86344, GB:X86329, FT GB:X86330, GB:X86331, GB:X86332, GB:X86333, GB:X86334, FT GB:X86335, GB:X86336, GB:X86337, SP:P10643, PID:179716, FT and PID:899271; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy3, transposase" FT /protein_id="AAO53566.1" FT /db_xref="GI:28850486" FT /translation="MKPAYPPLLLQMSPAYTPRPLKNLFTANQCWAHLIEEGGLRDIE FT VESVTKMLACGTSILGVKHYTCGNHSCPHVKYLCNTCSCRACPSCGKKATDQWIANQQ FT HRLPECTWQHLVFTLPDTLWPLFFHNRHWLDALCRLAVDNLLYAGRRRGVEVGVFCAI FT HTYGRRLNWHPHIHVSVTLGGIDDAGVWKDLSFHPSALRRRWMWNVRQYLLSQWEHTT FT VPPENAHLQSENDWRHLVLNAGGQHWHIHLSKKTKNGKKTVNYLGRYLKKPPISGSRL FT AHYTSGATLSFTYLDHRTKTYQQETLSQTDMLRRVVQHIPEKHFRMIRYFGFLANRVC FT GRQLPRVYEAIRMERRGKAPKLYFAQMSKAFLHRDPFSCVLCGARMVYTAAIAGLTVQ FT GLINNAQSIAQLRYVPA" FT CDS complement(23290..24099) FT /gene="PSPTO0018" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53574.1" FT /db_xref="GI:28850494" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(23290..24099) FT /gene="PSPTO0018" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53574.1" FT /db_xref="GI:28850494" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(24096..25118) FT /gene="PSPTO0019" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53575.1" FT /db_xref="GI:28850495" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(24096..25118) FT /gene="PSPTO0019" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53575.1" FT /db_xref="GI:28850495" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 33978..35933 FT /gene="PSPTO0028" FT /note="This gene is adjacent to the gene for the FT transposition helper protein.; similar to SP:P13989; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="transposase" FT /protein_id="AAO53584.1" FT /db_xref="GI:28850504" FT /translation="MAAVNEGLISSRRYRVGAALIGADGRSYVIGTINTKARQVVLIG FT QLGESHVYQDDDFRNTVASGDLRSVVRIETPCGVEEVFEPRFLSPTEIKSRDERQEYI FT RVVEQLIEDFTWKDIYIEIQRRYGSHRTVPSRRSIERYWRIYKESYSPNCLAAHFSDR FT GVHHSLSMEPEVQEIILNVIESKYCSSSRFSIQDIVHAINIRCSEKSAEIGVELGGVS FT RRTVGRFIARLNLKNIKGRLNPRTFRLIMRNACSYLDVKEPYARVEGDSTVLDIFIVD FT ASGNVIGCPTFYALIDTATMTIVGIHLTIQAASQVGLMQSLQFAFSPKGEPFKTQWSC FT MHEWPAPADIRTLVLDNGSDCHGPMIVKASQHLGMMLEYCVAGAPYQKPFIERFFGTL FT NTMLIKKLPGAKKSHDKRETHGLEDAQKSATLTIEKLNEVIIRWITDSYHIKKSDRLS FT EKFGQEFTPLQALTRLSQQYVVFPAPSAEELMEACRHYLEVKLSITREGINYQRQFYQ FT NEYVSALFKTNSTVKVDVCINPLDCRSVHIYDLGLKEWVTVQNKNPNMPAISFEQAKE FT IRKAHYKSDFELSGEDYVINHINIIEDANAQKRPKGKIRENQRAQRTVDKANAAAITP FT EQQLPIAETVLAAAPTEIVVAPHRRKK" FT /colour=178 58 238 FT MBL 33978..35933 FT /gene="PSPTO0028" FT /colour=178 58 238 FT CDS 35933..36868 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_0029" FT /old_locus_tag="PSPTO0029" FT /product="transposition helper protein" FT /note="This gene assignment is based in part on its FT location adjacent to the gene for transposase.; similar to FT GP:710585; identified by sequence similarity; putative" FT /db_xref="UniProtKB/TrEMBL:Q88BH9" FT /protein_id="AAO53585.1" FT /translation="MANEVIKVIRSEGFFHGRMLRSYQRAFQVIEASLAGERQILPMFG FT PSRIGKGEVAQALMADFPTQEVNGKICKPLIRVTAPTEPNQRALTLSIIRGLGGRVLSK FT CSTPDLYDQALRQLEIAKVRAIIVDEVQHLAELHSPQKVRALADFFKVLSDELNISLIL FT LGLPAAERLLGLNEQLRGRSLATELIYPYSWISAADRQDFAAGISLVAAAYSEQGWIFE FT LSGDVAIKSLYASSLGRFGMLVDLFSHAETNNANKIIDVRCLAKAYRNAVNDQPFSGNP FT FTPGTVISDHDLNAAYVKVLREAHLPIPRL" FT /colour=178 58 238 FT CDS complement(45183..46736) FT /gene="PSPTO0035" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO53591.1" FT /db_xref="GI:28850511" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(45183..46736) FT /gene="PSPTO0035" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO53591.1" FT /db_xref="GI:28850511" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(46754..47113) FT /gene="PSPTO0036" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO53592.1" FT /db_xref="GI:28850512" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(46754..47113) FT /gene="PSPTO0036" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO53592.1" FT /db_xref="GI:28850512" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(54971..56524) FT /gene="PSPTO0039" FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO53595.1" FT /db_xref="GI:28850515" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(54971..56524) FT /gene="PSPTO0039" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO53595.1" FT /db_xref="GI:28850515" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(56542..56901) FT /gene="PSPTO0040" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO53596.1" FT /db_xref="GI:28850516" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(56542..56901) FT /gene="PSPTO0040" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO53596.1" FT /db_xref="GI:28850516" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(60407..61423) FT /gene="hopK1" FT /locus_tag="PSPTO0044" FT /note="previously known as HopPtoK (PMID 12032338; FT Petnicki-Ocwieja et al, 2002) and HolPtoAB (PMID 11872842; FT Guttman et al, 2002); similar to GP:1008894; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopK1" FT /protein_id="AAO53599.1" FT /db_xref="GI:28850519" FT /translation="MNRISTSSVNSSFNYTAPTEEAQNRFASAPDNSPLVVTTTSIAQ FT ASEGLQRPGATLSMQAQRLRQLMGSPSEQCRRDTMLAKAFDAQRLNINTQAGSSNSPH FT LNALNTLQQRHFKPAAGGLEIPVTSNSLLGGGRQVYQIGSSSRELSHRPVNDQDRAPF FT RALERLHAELFRGGPIEFVPRGSNVLASNVRDVDMDEFDVINSKDGCQGIGTTGLGPC FT IAVCARGMDREGLPVLGVYHHSGIGSPEDTMATLDQAMRDKGALQIKYSLVGGMIMPK FT EEEAGSYDDEQSFLALKGSYSIEGARLHVSEGEEDVHTGEDNSVNVLLMPDRVLYGRD FT TLYC" FT /colour=255 0 0 FT gene complement(60407..61423) FT /gene="hopK1" FT /locus_tag="PSPTO0044" FT /colour=255 0 0 FT promoter complement(61504..61536) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 75949..76971 FT /gene="PSPTO0055" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53610.1" FT /db_xref="GI:28850530" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 75949..76971 FT /gene="PSPTO0055" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53610.1" FT /db_xref="GI:28850530" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 76968..77777 FT /gene="PSPTO0056" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53611.1" FT /db_xref="GI:28850531" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 76968..77777 FT /gene="PSPTO0056" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53611.1" FT /db_xref="GI:28850531" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(78120..79010) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_0057" FT /old_locus_tag="PSPTO0057" FT /product="transposition helper protein" FT /note="This gene assignment is based in part on its FT location adjacent to a gene for transposase.; similar to FT GP:710585, GB:L26976, GB:L27490, GB:L27490, GB:L27488, FT GB:L27489, GB:S69200, GB:S69326, GB:U13216, GB:U13214, FT GB:X83860, GB:X83859, GB:X83857, GB:X83861, GB:X83858, FT GB:X83862, GB:X83863, GB:U13217, GB:U13215, GB:U13218, FT GB:S68874, GB:L32660, GB:S68875, SP:P43115, PID:1199761, FT PID:483352, PID:532738, PID:532740, PID:532742, FT PID:532744, PID:532746, PID:633208, PID:633210, FT PID:633212, PID:633214, PID:633216, PID:633218, and FT PID:633220; identified by sequence similarity; putative" FT /db_xref="InterPro:IPR008868" FT /db_xref="UniProtKB/TrEMBL:Q88BF9" FT /protein_id="AAO53612.1" FT /translation="MSTYDHIHPDFRPVLQLSDRERILFIGEERWIGYALARTILDTLN FT DLIVMPKRARMPNLLIVGDSNNGKTTVIRRFQKTHGEGYVDENDDPVRPLILAEAPSTA FT DEKALYVALLEQLWMPYRITDTKLALRYQVIHSFRELKVRMLIIDEFHSLLTGSAIKQR FT EVMNALKSLCNELVIPIIGVGTTDAVRILHHDPQHASRFDVIKLDQWKLDPEFQRMLKG FT FESILPLKKPSGLAHPDKARRVHAISGGNLGNVHRLLMECSKQAIVSGKECIDIELIES FT MSWLRPTRGIREQSL" FT /colour=178 58 238 FT CDS complement(79007..80794) FT /gene="PSPTO0058" FT /note="This gene is adjacent to a gene for a transposition FT helper protein.; similar to GP:11071900, and SP:P13989; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="transposase" FT /protein_id="AAO53613.1" FT /db_xref="GI:28850533" FT /translation="MIGTEVETGRSAALQIIDLRAVDPEKLDGLYVNHDISSISSDAW FT AIAQKRYSAILPLLGNTVLSKETVAARAKATGISPATLYRWLDRYSRWNEVLALVPRK FT RGWREGSTRLSVEGEKLVQDVLDDYYLTVQRYTVQSTISEIERRARALDIQPPGASAI FT RARIRQIPEVVKLRRRGYAEQANNRHTPSVGQFPDEGYPLAVVQIDHTPVNLIVVDER FT HRKPIGRPWLTLAIDVYSCMIVGYYLAFEAPSETSVAMCIAHSILPKEAWLAAHDIRG FT EWPVWGFPRTIHTDNGADFRAQNIVDSCKNYGIDSVFRPSKVPKYGGRIERVLGTFMR FT MVHELPGTTFSNPQEREGYDSDAKAVLTMAEFEVWLVRSILKYHQTYHKKIHMSPARK FT WQLAFFGNREVDPLVSVPARPTDPLAVQLDFLPSVRRTVQTYGVQWDLFYYSEALRHW FT INQKDPATGKAIKLLFRRDPRDVSVIWFYDPVLKQYFRVPASYQAFPAVTLWEYHAAK FT DKAVSEGRGNIDDALIAEYAVENRKLVEEASATSKRARKDAQKSRTHSKKGTPAQPTK FT PVAKLVLDLVQEDSDLLMLSEVESTGEVE" FT /colour=178 58 238 FT MBL complement(79007..80794) FT /gene="PSPTO0058" FT /colour=178 58 238 FT promoter 82447..82478 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 82500..83363 FT /gene="hopY1" FT /locus_tag="PSPTO0061" FT /note="Previously known as HolPtoY (PMID 11872842; Guttman FT et al, 2002) and ORF11 (PMID 11854524; Fouts et al, FT 2002).; similar to GP:19071534; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopY1" FT /protein_id="AAO53615.1" FT /db_xref="GI:28850535" FT /translation="MNITPLTSAAGKGSSAQGTDKISIPNSTRMINAASIKWLNKVRS FT AISDHIRTSIEKGKLFELASLGSNMFGVPALSARPSTLQPVLAFEADPNHDLNLVRVY FT MQDSAGKLTPWDPTPNAVTTTSNPSEPDAQSDTASSSLPRRPPAGSVLSLLGIALDHA FT QRHSPRADRSAKGRPGREERNGARFNAKQTKPTEAEAYGDHQTPNPDLHRQKETAQRV FT AESINSMREQQNGMQRAEGLLRAKEALQAREAARKQLLDVLEAIQAGREDSTDKKISA FT TEKNATGINYQ" FT /colour=255 0 0 FT gene 82500..83363 FT /gene="hopY1" FT /locus_tag="PSPTO0061" FT /colour=255 0 0 FT CDS complement(103735..105132) FT /gene="algC" FT /note="similar to SP:P26276, and GP:150994; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="phosphomannomutase AlgC" FT /protein_id="NP_789942.1" FT /db_xref="GI:28867323" FT /translation="MNSPASVAPILPDTIFRAYDIRGVVEDTLNAETAYWIGRAIGSE FT SLAQNEPNVSVGRDGRLSGPELVQQLIQGLHDSGCHVSDVGLVPTPALYYAANVLAGK FT TGVMLTGSHNPKDYNGFKIVIAGDTLANEQIQALHERIKTNNLTSQKGSITQVNILDR FT YFKQIKDDIVMARKLKVVVDCGNGAAGVIAPQLIEALGCEVISLFAEVDGNFPNHHPD FT PGKLENLQDLIAKVKETGADLGLAFDGDGDRVGVVTNAGNVVYPDRLLMLFALDVLKR FT NPGADIIFDVKCTRRLTPLISEHGGRPVMWKTGHSLIKKEMKKSGALLAGEMSGHIFF FT KERWFGFDDGIYSAARLLEILSQEPANAEDLFETFPNDISTPEINIKVTDVTKFSIIE FT ALEKDAQWGDAKLTTIDGVRVDYPKGWGLVRASNTTPVLVLRFEAETQAELERIQGVF FT HAELKKVAPDLDLPF" FT /colour=0 255 0 FT CW_VIR_gene complement(103735..105132) FT /gene="algC" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0083" FT CDS 147445..147960 FT /gene="PSPTO0123" FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO53677.1" FT /db_xref="GI:28850597" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT /colour=178 58 238 FT MBL 147445..147960 FT /gene="PSPTO0123" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO53677.1" FT /db_xref="GI:28850597" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT CDS 148017..148796 FT /gene="PSPTO0124" FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO53678.1" FT /db_xref="GI:28850598" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT /colour=178 58 238 FT MBL 148017..148796 FT /gene="PSPTO0124" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO53678.1" FT /db_xref="GI:28850598" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT CDS 150512..151594 FT /gene="PSPTO0126" FT /note="similar to GB:Z31695, and PID:469144; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgZ/FimS" FT /protein_id="NP_789985.1" FT /db_xref="GI:28867366" FT /translation="MRIEPVKTPARPAPGKDFFLPELCLPQALLVLVVLAELLVVILV FT LVEPMRAGFDWVRLALMSLFVQWIVLLSAALLCGLRPWLARLTPGLAGMLSCLLVVGL FT TLLCTAVTDVCQLTGRISISGMVERYLRYSTIALIMSALMLRYFYLQSQWRKQQQGEL FT RARIESLQARIRPHFLFNTLNSIASLVASDPGKAEQAVLDLSDLFRASLAKPGSLVTW FT SEELALAKRYLSIEQYRLGERLQLDWRVSAIPDDLPIPQLTLQPLLENALIYGIAPRI FT DGGVVTVEADYKGGEFILSVSNPYEEVANRQTSNGTQQALSNIGARIAALFGPHASLS FT VERRDGRHYTCLRYPCARLTQEARAI" FT /colour=0 255 0 FT CW_VIR_gene 150512..151594 FT /gene="PSPTO0126" FT /colour=0 255 0 FT CDS 151591..152337 FT /gene="algR" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis regulatory protein AlgR" FT /protein_id="NP_789986.1" FT /db_xref="GI:28867367" FT /translation="MNVLIVDDEPLARERLSRMVNEIEGYRVLEDSASNGEEALALIE FT KHKPDVVLLDIRMPGIDGLQVAAKLCEREAPPAVVFCTAHDEFALEAFQVSAVGYLVK FT PVRAEHLIEALKKAERPNRVQLAAMTRPAAESGSGPRTHISARTRKGIELIPLDQVIY FT FIADHKYVTLRHEGGEVLLDEPLKALEDEFGDRFVRIHRNALVARKRIESMKRTPVGH FT FELFLRGLNGDALIVSRRHVAGVRKMMQQL" FT /colour=0 255 0 FT CW_VIR_gene 151591..152337 FT /gene="algR" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0127" FT CDS 157604..158077 FT /gene="algQ" FT /codon_start=1 FT /transl_table=11 FT /product="transcriptional regulator AlgQ" FT /protein_id="NP_789993.1" FT /db_xref="GI:28867374" FT /translation="MLESCQNAQERWGGVNKLIDRWLQSRLELIEAYDALGDTPEALA FT ADREGLQNFCGILVDYVSAGHFEVYEQLGDEARAFNDERGLELADTIYPRLDVITKFA FT LTFNDRCDKGDCSDAAVVAKEFNQLGQLLHERFELEDCLIEVLHTSHKEEVAAQV" FT /colour=0 255 0 FT CW_VIR_gene 157604..158077 FT /gene="algQ" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0134" FT CDS 159053..160009 FT /gene="PSPTO0136" FT /codon_start=1 FT /transl_table=11 FT /product="alginate regulatory protein AlgR3" FT /protein_id="NP_789995.1" FT /db_xref="GI:28867376" FT /translation="MSAKKKPVNTPLHLLQQLSGSLLEHLEDACSQALADAEKLLAKL FT EKQRGKAQEKLHNSRIKLQDAATAGKSKAQTKAKDAVAELEELLDALKSRQTETRTYI FT LHLKRDAQESLKLAQGIGRVKEAVGKILTTRSAKPAAPKAATKAPAAKAPAKAPSKAP FT AKPPVKAAAAKPVAKAAAKPAVAAKPAAKPAVVKAPAKTAAKPAARSAAAAKPVAAKS FT TAAKPAAKPAVTKAPAAAKAPASSAAKPAAAKPAVAKPAVKAPAKAPVKAVTKPAAVK FT PAAKPAAAKSATPAPAAAKPTPAAPAAASAKPADNATPTSAS" FT /colour=0 255 0 FT CW_VIR_gene 159053..160009 FT /gene="PSPTO0136" FT /colour=0 255 0 FT VR_#4 170000..175000 FT /colour=255 255 0 FT VR_#5 187500..195000 FT /colour=255 255 0 FT VR_#5 187500..195000 FT /colour=255 255 0 FT CDS 191660..192508 FT CDS 192549..193526 FT /gene="PSPTO0171" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO53725.1" FT /db_xref="GI:28850645" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 192549..193526 FT /gene="PSPTO0171" FT /colour=178 58 238 FT VR_#6 212468..239934 FT /colour=255 255 0 FT CDS complement(217450..218259) FT /gene="PSPTO0193" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53744.1" FT /db_xref="GI:28850664" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(217450..218259) FT /gene="PSPTO0193" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53744.1" FT /db_xref="GI:28850664" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(218256..219278) FT /gene="PSPTO0194" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53745.1" FT /db_xref="GI:28850665" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(218256..219278) FT /gene="PSPTO0194" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53745.1" FT /db_xref="GI:28850665" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS complement(219554..221107) FT /gene="PSPTO0196" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO53746.1" FT /db_xref="GI:28850666" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(219554..221107) FT /gene="PSPTO0196" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO53746.1" FT /db_xref="GI:28850666" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(221125..221484) FT /gene="PSPTO0197" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO53747.1" FT /db_xref="GI:28850667" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(221125..221484) FT /gene="PSPTO0197" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO53747.1" FT /db_xref="GI:28850667" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(223763..224449) FT CDS complement(243920..244819) FT /codon_start=1 FT /transl_table=11 FT /gene="xerC" FT /locus_tag="PSPTO_0222" FT /old_locus_tag="PSPTO0222" FT /product="integrase/recombinase XerC" FT /note="similar to SP:P22885; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q88B11" FT /db_xref="HSSP:P0A8P8" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011931" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q88B11" FT /protein_id="AAO53768.1" FT /translation="MEQHLDAYCMHLRSERQVSPHTLEAYRRDLSKVLAYCQKARLSSW FT NDLDIQHLRSFTARQHQQGQSSRSLARMLSAVRGFYKYLNREGLCQHDPANGLSPPKGE FT RRLPKTLDTDRTAQLLDGGVEDDFLAHRDQAIMELLYSSGLRLSELTGLNLDQLDLRDG FT LVQVLGKGSKTRVLPVGSKARQALETWLPLRALTNPQDDAVFVSQQGKRLGPRAVQLRI FT KTAGERELGQNLHPHMLRHSFASHLLESSQDLRAVQELLGHADIKTTQIYTHLDFQHLA FT TVYDSAHPRAKRKGAADD" FT /colour=178 58 238 FT gene complement(243920..244819) FT /gene="xerC" FT /locus_tag="PSPTO_0222" FT /old_locus_tag="PSPTO0222" FT /colour=178 58 238 FT VR_#7 257588..267574 FT /colour=255 255 0 FT VR_#8 297500..325000 FT /colour=255 255 0 FT CDS 314157..315395 FT /gene="PSPTO0287" FT /note="similar to GP:6166382; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO53832.1" FT /db_xref="GI:28850753" FT /translation="MLSPCCHGQSMKTKITGKTISRIVPAEKVYRIHDTLQPGLSIRV FT LPSGHASYMVTWARNKAATLGRVGVITLEQARTDASRYLADAHAIGEPVAITEKRTGA FT AMPTLDHFLTHTFEPWAAEHHRDAKNGNRAIRHSFEALLSIPLSSIDTKRVEQIRTAW FT LRAGLAPSTANRNITRLRGVLSRALEWGVLQEHPLKVRKLKVDDRSRVRYLSIEEETA FT LREALEARSNEMRDARDSANKWRLERHKEPLADLRAVRYADHLEPLVVLSINTGVRRG FT EAFNLTWADVDLKNKLITVEGDTSKSGQTRHVPLNREALDTLTKWKEQRGGNGFVFPG FT QHGKRLDNVKKSWSGLLKLAKVERFRWHDLRHTFASKLVMAGVPLNTVRELLGHTDIK FT MTLRYAHLAPGTKAAAVELI" FT /colour=178 58 238 FT MBL 314157..315395 FT /gene="PSPTO0287" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:6166382; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO53832.1" FT /db_xref="GI:28850753" FT /translation="MLSPCCHGQSMKTKITGKTISRIVPAEKVYRIHDTLQPGLSIRV FT LPSGHASYMVTWARNKAATLGRVGVITLEQARTDASRYLADAHAIGEPVAITEKRTGA FT AMPTLDHFLTHTFEPWAAEHHRDAKNGNRAIRHSFEALLSIPLSSIDTKRVEQIRTAW FT LRAGLAPSTANRNITRLRGVLSRALEWGVLQEHPLKVRKLKVDDRSRVRYLSIEEETA FT LREALEARSNEMRDARDSANKWRLERHKEPLADLRAVRYADHLEPLVVLSINTGVRRG FT EAFNLTWADVDLKNKLITVEGDTSKSGQTRHVPLNREALDTLTKWKEQRGGNGFVFPG FT QHGKRLDNVKKSWSGLLKLAKVERFRWHDLRHTFASKLVMAGVPLNTVRELLGHTDIK FT MTLRYAHLAPGTKAAAVELI" FT CDS complement(316980..317789) FT /gene="PSPTO0291" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53836.1" FT /db_xref="GI:28850757" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(316980..317789) FT /gene="PSPTO0291" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO53836.1" FT /db_xref="GI:28850757" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(317786..318808) FT /gene="PSPTO0292" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53837.1" FT /db_xref="GI:28850758" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(317786..318808) FT /gene="PSPTO0292" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO53837.1" FT /db_xref="GI:28850758" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT tRNA complement(323982..324058) FT /gene="tRNA-Arg-1" FT /product="tRNA-Arg" FT /note="codon recognized: CGG" FT promoter 325510..325542 FT CDS complement(345891..347675) FT /gene="PSPTO0319" FT /note="similar to GB:D26185, SP:P37437, PID:467335, and FT GB:AL009126; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein" FT /protein_id="NP_790169.1" FT /db_xref="GI:28867550" FT /translation="MAALAPSSQDRWLDLNDVLRELVTEGYLSQDDTETALSQRRSAV FT NIQLHPLEFLASQQFDDLKRPGKKLDLETLTAWLAKASGQPYMRIDPLKINVAAVTPL FT MSYAFAQRHKILAVAVDRESVTIASAQPYVRSWEADLAHVLKLQIKRVVANPTDIQRM FT AMEFFRLAKSVSGANASEQKMSNMGNFEQLLKLGASDQEPDANDAHIVNIVDWLFQYA FT FQQRASDIHIEPRREQGTVRFRIDGVLHNVYQFPAQVIMAIVSRLKSLGRMNVAEKRK FT PQDGRVKTTTPENREVELRLSTLPTAFGEKMVMRIFDPEVLLKDFDQLGFSSDDLRRW FT QEMTRQPNGIILVTGPTGSGKTTTLYTTLKKLATSEVNLCTIEDPIEMVEPAFNQMQV FT QHNIDLSFAAGVRALMRQDPDIIMIGEIRDLETAEMAIQAALTGHLVLSTLHTNDAPS FT AISRMLELGVPHYLLKATILGVMAQRLVRTLCPHCKAPINLNETDWQTLTRPWQAPVP FT PGAHQAVGCVECRDTGYRGRAGVYEIMVMSDNIKALISADLDLTAMRRQAFKEGTRSL FT RLSGAQKVSAGLTTLEEVLRVTPQSEQR" FT /colour=0 255 0 FT CW_VIR_gene complement(345891..347675) FT /gene="PSPTO0319" FT /colour=0 255 0 FT CDS 363589..364935 FT /gene="algB" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis transcriptional regulatory FT protein AlgB" FT /protein_id="NP_790184.1" FT /db_xref="GI:28867565" FT /translation="MEAATENQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQA FT DTLMQRQVFDLCFLDLRLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAG FT AADYLVKPCSPDQLRLATAKQLEVRQLSARLEALEGEVRKPKDGLDSHSPSMMAILET FT ARQVAVTDANILILGESGTGKGELARAIHGWSKRAKKSCVTINCPSLTAELMESELFG FT HSRGAFTGASESTLGRVNQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVT FT RRADVRILAATNLNLEDMVRSGRFREDLLYRLNVITLHLPALRERSEDILTLADRFLA FT RFVKEYARPARGFSEEARAALLNYRWPGNIRELRNVIERASIICPQERVEVSHLGMAE FT QPANNAPRVGAALSLDELEKAHIGAVLATSETLDQAAKTLGIDASTLYRKRKQYNL" FT /colour=0 255 0 FT CW_VIR_gene 363589..364935 FT /gene="algB" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0334" FT CDS complement(389541..391001) FT /gene="PSPTO0358" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO53902.1" FT /db_xref="GI:28850823" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLRLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(389541..391001) FT /gene="PSPTO0358" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO53902.1" FT /db_xref="GI:28850823" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLRLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT VR_#10 402612..417500 FT /colour=255 255 0 FT promoter 404752..404784 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT CDS 406323..407510 FT /gene="iaaL" FT /note="similar to SP:P18204, GB:J04031, SP:P11586, and FT PID:307178; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="indoleacetate-lysine ligase" FT /protein_id="NP_790220.1" FT /db_xref="GI:28867601" FT /translation="MTAYDVEKEWSRISNTAAKTHQNNDFEGFTYQDFRTHVPIMDKE FT GFAAQTERCLERNERNCLIGFTSGTSGNLKRCYYYYDCEVDEDSSRSNVFRSNGFIQP FT GDRCANLFTINLFSALNNITTMMAGNCGAHVVSVGDITLLTKSHFEALNSIKLNVLLG FT VPSTILQFIDAMQQHGVHIDIEKVVFNGEGLKTFQKKIIREAFGEQVSIVGVYGSSEG FT GILGFTNSPCHTEYEFLSDKYFIEKEGDSILITSLTRENFTPLLRYRLGDTATLSLKG FT DKLYLTDIQREDMSFNFMGNLIGLGIIQQAIKQTLGRTLEIQVHLSVTDARKELVTVF FT VQASEVNEDERARIETAIADIPDINEAYQKDQGSVLVVRKDARDYAVSERGKMLYIID FT RRN" FT /colour=0 0 255 FT diffusible 406323..407510 FT /gene="iaaL" FT /colour=0 0 255 FT /note="locus_tag: PSPTO0371" FT misc_feature complement(407668..407867) FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="2.6e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.200000 FT CDS complement(407868..408890) FT /gene="PSPTO0372" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO53916.1" FT /db_xref="GI:28850837" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL complement(407868..408890) FT /gene="PSPTO0372" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO53916.1" FT /db_xref="GI:28850837" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature complement(408891..409029) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="2.1e-36" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=118.500000 FT CDS complement(408969..411536) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_0373" FT /old_locus_tag="PSPTO0373" FT /product="Rhs family protein" FT /note="similar to GP:15130940, and SP:P16919; identified FT by sequence similarity; putative" FT /db_xref="InterPro:IPR006530" FT /db_xref="InterPro:IPR008727" FT /db_xref="UniProtKB/TrEMBL:Q88AL7" FT /protein_id="AAO53917.1" FT /translation="MFEAARLMDEIDHTSAMTGFVLGAIVGIAAVAYVSFTVATCGLGG FT ILLGLAVGLAGNAIASLGESIGAAFSSAAGQIESGSPNVFINGRPAAFAIDSTAVCEKH FT SPIVKVAEGSSNVFINGKPAARKGDKLTCGAKIGTGSNNVFIGGGTHRYLAVDDEVSAT FT ARYTVDILLVVAGGAKAVGSIAKLGLQAGLKAAGPCALRFMGGIVLSDAIVRFGVAPLA FT EKVLGGLHGNPVDTTTGRKLLIDEFDFSLPGRMPIEWTRFYASDLNVDSVLGKGWVLPW FT EQSLRRKGSFLYLSDNQGRSVPFVTLDYNQRIYNAQEQLYLVRTNGGHYLVQTLDNVFY FT YFGEVPDDNQPVPLERIENALGHFLHFVRSEDGVLTDICATGGQRVHLHYDEVSHRLST FT VKRIVDGKAVETLVRYHYDSNGQLNGVYNRNGDSVRTFSYTDGLMTRHANALGLGCEYR FT WEVLDDKPRVVEHWTSDGEHLHFDYDFEARQTRVTDVLGRCAEVTYNKDRRVIASTDFG FT GEQYRIALDDTGNITGLTLPDGNQLGFEYDDLSRLTAETDPLGRTTRFKHHYKTTLVKQ FT VTYPDGSTWQARYDDRGNLITEIDALGNKTEYYNGEDGLPHTITDATLKSKYLWWNSLA FT QVERFQDCSGKSTHYRYDERHQLIAVTDALNNTTTLERKPGGEVLRIDHPDGSRERFTY FT NAHGQVLTHTNGKDQTTHLARNARGLPVRRQDPKGLMVAYQYDKALRLVALTNENDATY FT TFAYDHSDRLIEEKRIDQLTRRFSYNLGGHLTQVEETGYSEKGERPQRSTYFERDSIGR FT LLARLNDDARQDFAYDDSDRLLSIQRKPTDSGRKLGVTAEKLE" FT /colour=178 58 238 FT gene complement(408969..411536) FT /locus_tag="PSPTO_0373" FT /old_locus_tag="PSPTO0373" FT /colour=178 58 238 FT VR_#11 440000..445000 FT /colour=255 255 0 FT VR_#11 440000..445000 FT /colour=255 255 0 FT CDS complement(481216..481728) FT /codon_start=1 FT /gene="folA" FT /locus_tag="PSPTO0437" FT /orf_name="PSPTO_0437" FT /product="Dihydrofolate reductase " FT /function="NADP binding" FT /function="dihydrofolate reductase activity" FT /biological_process="glycine biosynthesis" FT /biological_process="nucleotide biosynthesis" FT /protein_id="AAO53981.1" FT /db_xref="GO:0004146" FT /db_xref="GO:0006545" FT /db_xref="GO:0009165" FT /db_xref="GO:0050661" FT /db_xref="HOGENOM:HBG006101" FT /db_xref="HSSP:5DFR" FT /db_xref="InterPro:IPR001796" FT /db_xref="InterPro:IPR012259" FT /db_xref="TIGR:PSPTO0437" FT /db_xref="UniParc:UPI0000008431" FT /db_xref="UniProtKB/TrEMBL:Q88AF3" FT /transl_table=11 FT /translation="MKTHLPLSLIAALGENRVIGVDNSMPWHLPGDFKYFKATTLGKPI FT IMGRKTWDSLGRPLPGRLNLVVSRQTDLQLEGAEVFPSLDAAVVRAEQWAQEQGVDEVM FT LIGGAQLYAQGLAQADRLYLTRVALSPEGDAWFPEFDTAQWALVSNAENAAVDEKPAYS FT FEVWERV" FT CDS 493002..493517 FT /gene="PSPTO0449" FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO53993.1" FT /db_xref="GI:28850914" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT /colour=178 58 238 FT MBL 493002..493517 FT /gene="PSPTO0449" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO53993.1" FT /db_xref="GI:28850914" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT VR_#12 493002..497829 FT /colour=255 255 0 FT CDS 493574..494353 FT /gene="PSPTO0450" FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO53994.1" FT /db_xref="GI:28850915" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT /colour=178 58 238 FT MBL 493574..494353 FT /gene="PSPTO0450" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO53994.1" FT /db_xref="GI:28850915" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT misc_feature complement(518079..521327) FT /note="PSPTO0473; this region contains an authentic point FT mutation causing a premature stop and is not the result of FT a sequencing artifact; identified by similarity to the FT C-terminal regions of HopAS1 in Pseudomonas syringae FT phaseolicola" FT /colour=255 0 0 FT VR_#13 518079..527500 FT /colour=255 255 0 FT CDS complement(521328..522167) FT /gene="hopAS1" FT /locus_tag="PSPTO0474" FT /note="previously known as OF01152 (PMID 11854524; Fouts FT et al, 2002); identified by Glimmer2; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAS1" FT /protein_id="AAO54018.1" FT /db_xref="GI:28850939" FT /translation="MTLRINTRSATPVVPLETGSTSQPTPPPVTARATEPPPVANPAA FT PKSAPGVQQAHGLKTRIAGKLSERQTNFSLGIPGTGRTLNRPLRSGIPEEGEQVSNEE FT SHDPLLKEAHELQRMVESALTHLKAAPTSLWERPAPSTVRRITTKIFPWLKPAPLREV FT ASNGSNAKTKIKINSQQSPETIAAAVKELSTRLDHQSKVLATATHALVAAREHLESLE FT QATPPSSTEPLDHARARVQQADSTTRLASQQLRELIQGTDVLQLGALSEGQDQVEQKA FT EFS" FT /colour=255 0 0 FT gene complement(521328..522167) FT /gene="hopAS1" FT /locus_tag="PSPTO0474" FT /colour=255 0 0 FT promoter complement(522444..522475) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT VR_#14 544902..553307 FT /colour=255 255 0 FT VR_#14 545000..552500 FT /colour=255 255 0 FT CDS complement(548376..549170) FT /gene="hopU1" FT /locus_tag="PSPTO0501" FT /note="previously known as HopPtoS2 (PMID 12032338; FT Petnicki-Ocwieja et al, 2002)" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopU1" FT /protein_id="AAO54045.1" FT /db_xref="GI:28850966" FT /translation="MNINRQLPVSGSERLLTPDVGVSRQACSERHYSTGQDRHDFYRF FT AARLHVDAQCFGLSIDDLMDKFSDKHFRAEHPEYRDVYPEECSAIYMHTAQDYSSHLV FT RGEIGTPLYREVNNYLRLQHENSGREAEIDNHDEKLSPHIKMLSSALNRLMDVAAFRG FT TVYRGIRGDLDTIARLYHLFDTGGRYVEPAFMSTTRIKDSAQVFEPGTPNNIAFQISL FT KRGADISGSSQAPSEEEIMLPMMSEFVIEHASALSEGKHLFVLSQI" FT /colour=255 0 0 FT gene complement(548376..549170) FT /gene="hopU1" FT /locus_tag="PSPTO0501" FT /colour=255 0 0 FT CDS complement(549423..550037) FT /gene="hopF2" FT /locus_tag="PSPTO0502" FT /note="This gene has an isoleucine start. Previously known FT as HolPtoAD (PMID 11872842; Guttman et al, 2002) and FT HopPtoF (PMID 11854524; Fouts et al, 2002); similar to FT GP:7677395; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopF2" FT /protein_id="AAO54046.1" FT /db_xref="GI:28850967" FT /translation="MGNICGTSGSRHVYSPSHTQRITSAPSTSTHVGGDTLTSIHQLS FT HSQREQFLNMHDPMRVMGLDHDTELFRTTDSRYIKNDKLAGNPQSMASILMHEELRPN FT RFASHTGAQPHEARAYVPKRIKATDLGVPSLNVMTGSLARDGIRAYDHMSDNQVSVKM FT RLGDFLERGGKVYADASSVADDGETSQALIVTLPKGQKVPVERV" FT /colour=255 0 0 FT gene complement(549423..550037) FT /gene="hopF2" FT /locus_tag="PSPTO0502" FT /colour=255 0 0 FT CDS complement(550174..550569) FT /gene="shcF" FT /locus_tag="PSPTO_0503" FT /codon_start=1 FT /transl_table=11 FT /product="type III chaperone protein ShcF" FT /protein_id="AAO54047.1" FT /db_xref="GI:28850968" FT /translation="MKNAFDLLVEGLAKDYNMPPLPDKKHIDEVYCFEFQSGMNVKVY FT QDEFRWVYFTADVGTFQDSSIDTLNYALQLNNFSLRKPFLTFGMTKEKNGVLHTRTPL FT IEVDNVQMRRIFEELIGVAGEIRKTLKLK" FT /colour=200 150 100 FT gene complement(550174..550569) FT /gene="shcF" FT /locus_tag="PSPTO_0503" FT /old_locus_tag="PSPTO0503" FT /colour=200 150 100 FT promoter complement(550602..550634) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS complement(550651..551679) FT /pseudo FT /color=178 58 238 FT CDS 563660..564175 FT /gene="PSPTO0515" FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO54058.1" FT /db_xref="GI:28850979" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT /colour=178 58 238 FT CDS 563660..564175 FT /old_locus_tag="PSPTO0515" FT /codon_start=1 FT /locus_tag="PSPTO0515" FT /orf_name="PSPTO_5508" FT /product="ISPsy8, transposase OrfA" FT /function="DNA binding" FT /function="transposase activity" FT /biological_process="DNA transposition" FT /protein_id="AAO54058.1" FT /db_xref="GO:0003677" FT /db_xref="GO:0004803" FT /db_xref="GO:0006313" FT /db_xref="HOGENOM:HBG319698" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR002514" FT /db_xref="InterPro:IPR002514" FT /db_xref="TIGR:PSPTO0123" FT /db_xref="UniParc:UPI0000008308" FT /db_xref="UniProtKB/TrEMBL:Q877K7" FT /transl_table=11 FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANYK FT SHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYSND FT LAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEELKEQ FT QRRQKKKP" FT /color=178 58 238 FT MBL 563660..564175 FT /gene="PSPTO0515" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO54058.1" FT /db_xref="GI:28850979" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT CDS 564232..565011 FT /gene="PSPTO0516" FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO54059.1" FT /db_xref="GI:28850980" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT /colour=178 58 238 FT MBL 564232..565011 FT /gene="PSPTO0516" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO54059.1" FT /db_xref="GI:28850980" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT CDS complement(565932..567566) FT /gene="PSPTO0518" FT /codon_start=1 FT /transl_table=11 FT /product="tryptophan 2-monooxygenase, putative" FT /protein_id="NP_790366.1" FT /db_xref="GI:28867747" FT /translation="MFGPDFPFAFDDWIEHPKGLGSIPAEHHGAEVAIIGAGIAGLVA FT AYELMKMGLKPVVYEASKMGGRLRSQEFEGAKGIVAELGGMRFPVSSTAFFHYVDKLG FT LESRPFPNPLTAASGSTVIDLEGTTYYAQMLSDLPALFQEVADAWADALESGSQFGDI FT QQAIRDRDVPRLKELWNKLVPLWDDRTFYDFVATSKAFAKLSFYHREVFGQVGFGTGG FT WDSDFPNSMLEIFRVVMTNCDEHQHLIVGGVQQVPVGLWSHVPERCTHWPKGTSLSSL FT HRGAPRPGVKRIARAEDGSFAVTDNWGDTRQYAAVLTTCQSWLLTTQIECEESLFSQK FT MWMALDRTRYMQSSKTFVMVDRPFWKDKDPQTGRDLMSMTLTDRLTRGTYLFDNGDDK FT PGVICLSYSWMSDALKMLPQPIEKRVKLALDALKKIYPKVDIAARIIGDPITVSWEAD FT PHFLGAFKGALPGHYRYNQRMYAHFMQQDMPSEQRGMFIAGDDVSWTPAWVEGAVQTS FT LNAVWGIMNHFGGKTHAENPGPGDVFHEIGPITLAD" FT /colour=0 0 255 FT diffusible complement(565932..567566) FT /gene="PSPTO0518" FT /colour=0 0 255 FT promoter 572473..572504 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT VR_#15 572500..588589 FT /colour=255 255 0 FT CDS 580669..581433 FT /gene="PSPTO0531" FT /note="similar to GP:5929870, and GP:8163888; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type IV secretion system protein, putative" FT /protein_id="NP_790379.1" FT /db_xref="GI:28867760" FT /translation="MDLFKCLARMGKQPLRITAAFSSLMCAQQGFAQIPVTVTSQVTE FT SPMTIAEFASNSTRWGQQVQQMASQIDQMKQQYGAITGSRGLGRVFDDPQLREYLPQE FT WQAVYDSVKSGGYSGLDGRAEMIYADNKVFDACQSFAQDEQRAACQAQAVKPSQDKAF FT ALDAYDQAKGRLRQLDQLMGQIDKTQDPKGIAELQGRIAAEQAMIQNEQTKLQMFQMV FT AQAEDKVQEQRQRELNAQILDKRGFKTRTMLNLGGN" FT /colour=0 255 0 FT CW_VIR_gene 580669..581433 FT /gene="PSPTO0531" FT /colour=0 255 0 FT CDS 583081..584058 FT /gene="PSPTO0534" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54076.1" FT /db_xref="GI:28850997" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 583081..584058 FT /gene="PSPTO0534" FT /colour=178 58 238 FT CDS complement(584780..586021) FT /gene="PSPTO0535" FT /note="similar to SP:P16470, GB:U02082, and PID:484102; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54077.1" FT /db_xref="GI:28850998" FT /translation="MWAHHTQSRALRGFRVSGWLCTNTVLWSKGTKSVQCWCASTPLE FT SFQMATLVKTPSGTWKALIRKTGWPTVAKTFRTKRDAEDWSRRTEDEMVRGVYIQRSG FT SERMTLEAALKRYLSDITPTKKPTTQRGETSKAKKLIEHLGKYSLAALSADIIAGYRD FT KRLNEPSRGGTISNNTVRLELALLSHLYTVAIQEWGLGLTFNPVLNIRKPSPGDGRDR FT RLSPEEERLLLAAVNRHSNPMLGWIVCIALETGMRSSEISSLRRPQVDLAKRVIRLSD FT TKNDGSRTVPLSKRATEVFKAAMDNPVRPIDCNLVFFGEPGKDGKRRPYTFTKIWGQL FT KKKLDLPDFRFHDLRHEAVSRLVEGGLSDQEVSAISGHKSMQMLKRYTHLRAEDLVAR FT LDRIGSAPQTQGRNRSKSEKK" FT /colour=178 58 238 FT MBL complement(584780..586021) FT /gene="PSPTO0535" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to SP:P16470, GB:U02082, and PID:484102; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54077.1" FT /db_xref="GI:28850998" FT /translation="MWAHHTQSRALRGFRVSGWLCTNTVLWSKGTKSVQCWCASTPLE FT SFQMATLVKTPSGTWKALIRKTGWPTVAKTFRTKRDAEDWSRRTEDEMVRGVYIQRSG FT SERMTLEAALKRYLSDITPTKKPTTQRGETSKAKKLIEHLGKYSLAALSADIIAGYRD FT KRLNEPSRGGTISNNTVRLELALLSHLYTVAIQEWGLGLTFNPVLNIRKPSPGDGRDR FT RLSPEEERLLLAAVNRHSNPMLGWIVCIALETGMRSSEISSLRRPQVDLAKRVIRLSD FT TKNDGSRTVPLSKRATEVFKAAMDNPVRPIDCNLVFFGEPGKDGKRRPYTFTKIWGQL FT KKKLDLPDFRFHDLRHEAVSRLVEGGLSDQEVSAISGHKSMQMLKRYTHLRAEDLVAR FT LDRIGSAPQTQGRNRSKSEKK" FT tRNA complement(586008..586084) FT /gene="tRNA-Met-1" FT /product="tRNA-Met" FT /note="codon recognized: AUG" FT VR_#17 612500..620000 FT /colour=255 255 0 FT VR_#17 612500..620000 FT /colour=255 255 0 FT misc_feature 625118..647483 FT /note="PYOCIN001; Putative bacteriocin; Pyocin F-like; FT Possible F-type Pyocin. Integrated between trpE and trpG FT genes like P. aeruginosa pyocin. NO capsid or head genes. FT Tail genes have best hits to Lambdoid phages like FT Coliphage P27. Note that HopPtoH and HopPtoC are just FT outside of this region." FT /colour=178 58 238 FT VR_#18 625118..652500 FT /colour=255 255 0 FT CDS 632886..634382 FT /old_locus_tag="PSPTO0577" FT /codon_start=1 FT /locus_tag="PSPTO0577" FT /orf_name="PSPTO_0577" FT /product="Tail sheath protein, putative" FT /cellular_component="provirus" FT /protein_id="AAO54119.1" FT /db_xref="GO:0019038" FT /db_xref="HOGENOM:HBG254562" FT /db_xref="InterPro:IPR009375" FT /db_xref="TIGR:PSPTO0577" FT /db_xref="UniParc:UPI00000084B6" FT /db_xref="UniProtKB/TrEMBL:Q88A20" FT /transl_table=11 FT /translation="MAISFNNIPSDVRVPLFYAEMDNTAANSASASMRRLIVAQVNDDV FT SGPELGSLVLVPSVALAKNIGGQGSMLAAMYEIWRKADPTGEVWCLPLLNTEGVKAGAT FT ITLTGAATEAGLLNLYVGGARVQATVVNGATAAQAATALSVKINATPDLPIKAVVEAGV FT LTLSCKWSGASGNDIHLEFNRLGKTNGEVIPAGLTAAVTAMTGGVGTPDQLKALAALGD FT EPFEFLCMPWTDTSTLDAWKAAMDDSTGRWSWARQLYGHVYSAKRGTVGTLVAAGQLRN FT DQHITIQGVETGVPQPVWLQAAALAARTAVFISADSSRPTQSGTMPGLDPAPASQRFTL FT TERESLLRYGIATAYYEGGYVRIQRSITTYQKNAYGQADNSYLDSETMHQSAFIIRRLQ FT GIITSKYGRHKLASDGTRFGAGQPIITPSTIRGELIAQYARLQEEGHVENAEVFAQHLI FT VERDGNDPSRVNVMFPPDYINGLRVFALLNQFRLQYDEAA" FT /color=178 58 238 FT CDS 635214..637358 FT /old_locus_tag="PSPTO0580" FT /codon_start=1 FT /locus_tag="PSPTO0580" FT /orf_name="PSPTO_0580" FT /product="Tail tape meausure protein" FT /cellular_component="provirus" FT /protein_id="AAO54122.1" FT /db_xref="GO:0019038" FT /db_xref="HOGENOM:HBG305575" FT /db_xref="InterPro:IPR010090" FT /db_xref="TIGR:PSPTO0580" FT /db_xref="UniParc:UPI00000084B9" FT /db_xref="UniProtKB/TrEMBL:Q88A17" FT /transl_table=11 FT /translation="MADTIRTLITGVDQLSPTLATIRNNVKGLETSLGAIELGKAITDN FT ALAGPLIAGVKAAIGFETSMAGVKRSVTFETPQQFQQMGSDILDLSERLPESANGIAAI FT VAAGAKANVPREELTGFASDAVKMGVAFDQTAAESGDMMASWRSSFQMTQPQVAALSEK FT INVLGGNNLEKKIATMVTAMGPLGPVAGLASGQLAAMGATLASVDVPADVAASGMKRFM FT QSLTEGGAAKAGAFEALQLDVNQLTQGMQSDPSGTIEKVLTAVSSVDPDKQSDVITQLF FT GAESLGAITPLLANLDVLRSNLAKVGEGVQNSGTLEKEFADNSQTTATAIKEMTNRVDR FT LGINIGSMFLPAMNQAMAVIGPMISQVAALAAEHPGVIKGVVAAAIAFGVLQVAVMTAT FT TAMSVLSAVMGLSPLGLIVRGLALAAGLLIANWSTVAPYFQAVWEAIRGPAMALWDVLK FT AVFAWTPIGMIVANWQPLSEFFAALWDVIKVLATPFSDFLQTLFSWTPLGMVVANWQPI FT SEYFAGLWESIKTAAQPFTDALAMMFSFSPLGMVIEKWAPIKAWFADLWADIKPFIDPI FT MSWFGGDGDKSLLKSATEKVNQFAEEQRVRNAGPGGGTGAFLAANAVDASRSQQQQLNL FT ATGVPPTSQLLSAPNFPAPGNLLLQQGAAGAGARLEGELNIRFENAPPGMRPGQVQSNQ FT PGLTISPNVGYRTLGAGAGL" FT /color=178 58 238 FT CDS 637355..639178 FT /old_locus_tag="PSPTO0581" FT /codon_start=1 FT /locus_tag="PSPTO0581" FT /orf_name="PSPTO_0581" FT /product="DNA circulation protein, putative" FT /cellular_component="provirus" FT /protein_id="AAO54123.1" FT /db_xref="GO:0019038" FT /db_xref="HOGENOM:HBG305574" FT /db_xref="InterPro:IPR009826" FT /db_xref="TIGR:PSPTO0581" FT /db_xref="UniParc:UPI00000084BA" FT /db_xref="UniProtKB/TrEMBL:Q88A16" FT /transl_table=11 FT /translation="MSTWRDSLLPASFRGVGFFIEKAVVPVGRKGQLHEFPQRDEPYFE FT SLGKQAQVHTLTAFIVGRDCFEKRDNLLQALEKDGAGELVHPWLGRMQVQVGQCSVTHT FT LIEGGMVRLDLVFYPANPLKFPVSTLNTRRQLLGASASLLDSALRRYRSVMAVVDAVRI FT NVQALRSALSGVFATIQRQFAPFMAIYSDVTALVHSLVNAPLTVSTLFTTFFASFDGDS FT RRSRRANGSSSVSGASTTTGSGSSVGGGSGAGSGGSSGSGSGSSTSISLASSSGSSGGS FT SDLETVPYPDAPFQGDPWHFSRPLGDGFIGQLSSRTALRAISAYLRTLAVAEEFWGMPT FT DRAEASALLALPVHPTLALLRPERPIWFPATTDFDGDREAIESSMRGLVARVKTARPDD FT ELIAFASPIFVSMERCVEVSLVRWSQAEESSIADADLAAHLEEFWADGWMLRSASPEPL FT STTTVFASPPLDRLMEDQCKAWPLAAPLGIDRLGYLQHDLYPGRLFLPTLPSTDQAELT FT PRGGQLEIKVDEQVIADLCYWNAGWGTARPMQFSGNCGTALTSRGRCYREGEDALEGAV FT RSFYLWEVKTLHRSNTFEPFNQTLTTGAMFV" FT /color=178 58 238 FT CDS 639401..640042 FT /old_locus_tag="PSPTO0582" FT /codon_start=1 FT /locus_tag="PSPTO0582" FT /orf_name="PSPTO_0582" FT /product="Hypothetical protein" FT /protein_id="AAO54124.1" FT /db_xref="HOGENOM:HBG305573" FT /db_xref="TIGR:PSPTO0582" FT /db_xref="UniParc:UPI00000084BB" FT /db_xref="UniProtKB/TrEMBL:Q88A15" FT /transl_table=11 FT /translation="MNLAIVDEFTMDLEYGYLRSKFDETNTPYQSVFLSAQSQMWIFSA FT YELMRTWREKISKYLKAADNGGLPLKLKELQKPLGYENFTVQKRIEEINLLIEKPELIE FT TMRDDLKRTQMLFTQMELLRMSLAKHQMRKRPSAAVQAPTVGYMNRWCGSLEYQINSGQ FT MIICNLSRRDIADGIRAIPAMTIPSDDDLDSFEAAMRGASDDELKSMFQN" FT /color=178 58 238 FT CDS 644311..645321 FT /gene="PSPTO0586" FT /note="identified by match to PFAM protein family HMM FT PF02899" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54128.1" FT /db_xref="GI:28851049" FT /translation="MASTASYEHVLHRYPSVQEWLELLGNLGRAPATLEAYGRGLAHY FT LLHCEASSLEAESITFEQVTLYIRRLLPGQENAVANSTLHQRLTAIRLWYDHLVFQGR FT CAQNPVPRDQHGRLCQIPGHSGFVRGLVPRLIKLPDIPTDEQWRYFLSIAARSSIRDR FT LMLSLAYCGALRRAELVGLRIEDLDLAHRLISVRAETTKGRRSRVVCYSPDIAPILGT FT HLHALRLAGWSKGALFRSESDRNRGSALTRWTWSKTVERWARDSNLSCLSTHTFRHLR FT LTHLARAGWKLHELTAYAGHRDPKTTLIYVHLSGADLTARLAHSVGSLDARLFAELFK FT SE" FT /colour=178 58 238 FT MBL 644311..645321 FT /gene="PSPTO0586" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF02899" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54128.1" FT /db_xref="GI:28851049" FT /translation="MASTASYEHVLHRYPSVQEWLELLGNLGRAPATLEAYGRGLAHY FT LLHCEASSLEAESITFEQVTLYIRRLLPGQENAVANSTLHQRLTAIRLWYDHLVFQGR FT CAQNPVPRDQHGRLCQIPGHSGFVRGLVPRLIKLPDIPTDEQWRYFLSIAARSSIRDR FT LMLSLAYCGALRRAELVGLRIEDLDLAHRLISVRAETTKGRRSRVVCYSPDIAPILGT FT HLHALRLAGWSKGALFRSESDRNRGSALTRWTWSKTVERWARDSNLSCLSTHTFRHLR FT LTHLARAGWKLHELTAYAGHRDPKTTLIYVHLSGADLTARLAHSVGSLDARLFAELFK FT SE" FT CDS 645345..647486 FT /gene="PSPTO0587" FT /note="similar to GP:9187579; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54129.1" FT /db_xref="GI:28851050" FT /translation="MSYVPFDVDHYERQEELSDLERTILSNRRYRSDWAYLQSSVPRL FT VIPLIDLVAHAGVSDRLAVSSVSVILWYVSRTDIPYWSWSEMQWLALLDTQAGSRPYL FT AAVAYHMGGFRTPKRITKFRQSAIYASFIFGHKIFKDELTRLSTVLKSLGYTARHLEK FT FLSGVLAALMLENGDPRLETFTEVLLIKGQGHRSVGIARLVGKVSHGLAALGILDKPL FT RKRGYADWREKSIEGIDPVWVSWCRRWRDTSTLRPRTRESNYSFMLRTGIWLTREQPW FT VSSPVDWNTSTCAAVIAAIDRMTVGEWALESALGTKLKGLGQPIAPNSKRAFLHALRR FT FFIDFELWGWGRLKFSPRHYLATPRTVAFNSGINPRVIDDSSWLKLIWASLNLERKDL FT LSETHYPLAMVQAASVVWTHTGLRSNEIMRLSVGCAHAQPHEVVHEDGTTIPPGTLCY FT LDIPASKTFKAFVKPVAVVVKERIDVWLQERPVNQAPLVDERTGEKVSYLFQFRGKRM FT GAGVINRTIIPMLCAKAGVPLDDSRGRITSHRGRASVVTALASVPQGMSLMELMQWSG FT HSSPSSTLHYIRIRPTKLAASFVRADQMSHMVSVLIDHDVIARHSSDPYTFYDLGDSY FT CSNPFWSSCPHRMACAGCDFNVPKASARAQALESKASIGHYLEAVPLTADERAIVEGD FT LAKLDGLIRKLDDVPTLDGRTPSQIEAKKNR" FT /colour=178 58 238 FT MBL 645345..647486 FT /gene="PSPTO0587" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:9187579; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54129.1" FT /db_xref="GI:28851050" FT /translation="MSYVPFDVDHYERQEELSDLERTILSNRRYRSDWAYLQSSVPRL FT VIPLIDLVAHAGVSDRLAVSSVSVILWYVSRTDIPYWSWSEMQWLALLDTQAGSRPYL FT AAVAYHMGGFRTPKRITKFRQSAIYASFIFGHKIFKDELTRLSTVLKSLGYTARHLEK FT FLSGVLAALMLENGDPRLETFTEVLLIKGQGHRSVGIARLVGKVSHGLAALGILDKPL FT RKRGYADWREKSIEGIDPVWVSWCRRWRDTSTLRPRTRESNYSFMLRTGIWLTREQPW FT VSSPVDWNTSTCAAVIAAIDRMTVGEWALESALGTKLKGLGQPIAPNSKRAFLHALRR FT FFIDFELWGWGRLKFSPRHYLATPRTVAFNSGINPRVIDDSSWLKLIWASLNLERKDL FT LSETHYPLAMVQAASVVWTHTGLRSNEIMRLSVGCAHAQPHEVVHEDGTTIPPGTLCY FT LDIPASKTFKAFVKPVAVVVKERIDVWLQERPVNQAPLVDERTGEKVSYLFQFRGKRM FT GAGVINRTIIPMLCAKAGVPLDDSRGRITSHRGRASVVTALASVPQGMSLMELMQWSG FT HSSPSSTLHYIRIRPTKLAASFVRADQMSHMVSVLIDHDVIARHSSDPYTFYDLGDSY FT CSNPFWSSCPHRMACAGCDFNVPKASARAQALESKASIGHYLEAVPLTADERAIVEGD FT LAKLDGLIRKLDDVPTLDGRTPSQIEAKKNR" FT CDS complement(647588..648244) FT /gene="hopH1" FT /locus_tag="PSPTO0588" FT /note="previously known as HopPtoH (PMID 12032338; FT Petnicki-Ocwieja et al, 2002)." FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopH1" FT /protein_id="AAO54130.1" FT /db_xref="GI:28851052" FT /translation="MITPSRYPGIYIAPLSNEPTAAHTFKEQAEEALDHISAAPSGDK FT LLRKISTLASQKDRKVTLKEIEINNQCYTEAVLSRRQLEKYEPENFNENRHIASQLSR FT KGTFTKGEGSNAIIGWSPDKASIRLNQNGSPLHLGMDNDDKITTLAHELVHARHVLGG FT SSLADGGDRYNPRTGSGKEELRAVGLDKYRYSLTKKPSENSIRAEHGLPLRMKYRAHQ FT " FT /colour=255 0 0 FT gene complement(647588..648244) FT /gene="hopH1" FT /locus_tag="PSPTO0588" FT /colour=255 0 0 FT promoter complement(648424..648456) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS complement(648896..649705) FT /gene="hopC1" FT /locus_tag="PSPTO0589" FT /note="previously known as HopPtoC (PMID 12032338; FT Petnicki-Ocwieja et al, 2002);identified by match to TIGR FT protein family HMM TIGR01586" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopC1" FT /protein_id="AAO54131.1" FT /db_xref="GI:28851053" FT /translation="MTIVSGHIGKHPSLTTVQAGSSASVENQMPDPAQFSDGRWKKLP FT TQLSSITLARFDQDICTNNHGISQRAMCFGLSLSWINMIHAGKDHVTPYASAERMRFL FT GSFEGVVHARTVHNFYRTEHKFLMEQASANPGVSSGAMAGTESLLQAAELKGLKLQPV FT LEDKSNSGLPFLIACKQSGRQVSTDEAALSSLCDAIVENKRGVMVIYSQEIAHALGFS FT VSSDGKRATLFDPNLGEFHTHSKALADTIENISSADGLPLIGVQVFASKIH" FT /colour=255 0 0 FT gene complement(648896..649705) FT /gene="hopC1" FT /locus_tag="PSPTO0589" FT /colour=255 0 0 FT /blastp_file="blastp\Pst-VRglobal.tab.seq.00061.out" FT promoter complement(649735..649766) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT rRNA 666741..668258 FT /gene="Ps16SA" FT /product="16S ribosomal RNA" FT tRNA 668362..668438 FT /gene="tRNA-Ile-1" FT /product="tRNA-Ile" FT /note="codon recognized: AUC" FT tRNA 668483..668558 FT /gene="tRNA-Ala-1" FT /product="tRNA-Ala" FT /note="codon recognized: GCA" FT rRNA 668802..671704 FT /gene="Ps23SA" FT /product="23S ribosomal RNA" FT rRNA 671852..671971 FT /gene="Ps5SA" FT /product="5S ribosomal RNA" FT tRNA 674391..674475 FT /gene="tRNA-Tyr-1" FT /product="tRNA-Tyr" FT /note="codon recognized: UAC" FT tRNA 674500..674573 FT /gene="tRNA-Gly-1" FT /product="tRNA-Gly" FT /note="codon recognized: GGA" FT tRNA 674600..674675 FT /gene="tRNA-Thr-1" FT /product="tRNA-Thr" FT /note="codon recognized: ACC" FT tRNA 674841..674916 FT /gene="tRNA-Trp-1" FT /product="tRNA-Trp" FT /note="codon recognized: UGG" FT VR_#20 717500..730344 FT /colour=255 255 0 FT CDS 723766..724125 FT /gene="PSPTO0669" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54211.1" FT /db_xref="GI:28851133" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 723766..724125 FT /gene="PSPTO0669" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54211.1" FT /db_xref="GI:28851133" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 724143..725696 FT /gene="PSPTO0670" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54212.1" FT /db_xref="GI:28851134" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 724143..725696 FT /gene="PSPTO0670" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54212.1" FT /db_xref="GI:28851134" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT VR_#21 750560..772500 FT /colour=255 255 0 FT rRNA 827555..829072 FT /gene="Ps16SB" FT /product="16S ribosomal RNA" FT tRNA 829176..829252 FT /gene="tRNA-Ile-2" FT /product="tRNA-Ile" FT /note="codon recognized: AUC" FT tRNA 829297..829372 FT /gene="tRNA-Ala-2" FT /product="tRNA-Ala" FT /note="codon recognized: GCA" FT rRNA 829616..832518 FT /gene="Ps23SB" FT /product="23S ribosomal RNA" FT rRNA 832666..832785 FT /gene="Ps5SB" FT /product="5S ribosomal RNA" FT VR_#22 842459..853510 FT /colour=255 255 0 FT CDS 843955..844932 FT /gene="PSPTO0780" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54322.1" FT /db_xref="GI:28851244" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 843955..844932 FT /gene="PSPTO0780" FT /colour=178 58 238 FT VR_#23 874305..889113 FT /colour=255 255 0 FT CDS complement(875259..875759) FT /gene="PSPTO0810" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein" FT /protein_id="NP_790657.1" FT /db_xref="GI:28868038" FT /translation="MKHAGFTLIELLIVVALVAILANVATPSFKQLIDSNRGLVAAQE FT LASGIRSARVAAITRNQIVTIHAIEEDWSNGWRIILDLDGKGPDEKDTLLVERANGGT FT PRVVGNRKVTERLSFNGLGNLRNRTNGTLHVCLDDQPASHYRVIVAPTGRVRIEDTKR FT DVALCR" FT /colour=0 255 0 FT CW_VIR_gene complement(875259..875759) FT /gene="PSPTO0810" FT /colour=0 255 0 FT CDS 878088..881291 FT /gene="PSPTO0815" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus-associated protein, putative" FT /protein_id="NP_790662.1" FT /db_xref="GI:28868043" FT /translation="MPTAKALRGGLKYLYGALLALYLASPVYAFTPAQVPLLTSPAVP FT PNLMLLVDNSGSMYNIIWDSGFDASVNRPDISYFSTQCLSGLITVVCPFLSTLSGDET FT LSLGDINGTNILTLQLRCPFGGRPVFRNDIQYCLNLPDPAGNGLTRYTADYLSYLIDL FT VSPGFFGVRNYTNGVIPNDFRMNVAKTVATNLVTNNTTLRIGLASFNQPTNSDLGPGG FT KIARLVTDLSPVAISTFQPSGVSQQQATQNITDLKTAITNLTPSANTPLAETYYEITR FT YFRGMSPFYQSGSNYVSPIQYRCQKNYGVVVTDGLPTYDRTFPANDPDDVLDTTRSLP FT NWDLNAANDGDNLSGDGEGDTLYLDDLAKFAYDIDLRRDAVTTGGDLTGKSWDTAGFA FT KQNMSTYTIGFTASNQMLNDAADDTHGHGKYFQANDSTGLTSALNLALSDIYAKVGSG FT AGGAANSSTLQAGTQFYQTLYDPTDWHGTIRAFNLDQTTGALSAPVWTTDTAIVSGST FT APVFESWNTVSTSGRIALDYNNFSPAQQAALNATLPGNANGIELINWAKGTANAKFRP FT RTRLLGDIVNSSLGTAFPKQKTAADLTGDTTYTTYLAIKANSMSSSILANANDGFFNV FT INSGDGSRRYAYMPSTALTSLATIASTTYGSGVHKFTVDGQIAVFDTQLAAGSSWRTV FT AYGGTGAGGKAFFAIKLFEGVSNTVSALWEVKAPDTSDTNNKFNNLGYAYARPDVARM FT ADGTGIVVVGNGYGSFTGRASLYVLNANTGAFIAEIQTPILNSETDNGLSSVKLRVNS FT QNVVQAAYAGDLKGRLWKFDLSGATAASWKIAFGGAPLFTAPRGANQPITVQPFVLDH FT PLNGKIVYFGTGKFLEVADKQTSALQDFYAIWDADSGAGGTVEANLQAQAVNGSVVSN FT GTTYFTSTTNDVDWSVKKGWYMPLSAVAPYLGERIIYPAQTSRGRIIFSTASVNSADP FT CESTGTGRVFELNAATGSMLNYQVLDTNGDNSINNSDLFAAGIGYTGIPVVSAIVSGT FT GDGNEVKIINNSTGNTPDVLKEKGGSGNQRIMWRQIQ" FT /colour=0 255 0 FT CW_VIR_gene 878088..881291 FT /gene="PSPTO0815" FT /colour=0 255 0 FT CDS 881303..881704 FT /gene="PSPTO0816" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein" FT /protein_id="NP_790663.1" FT /db_xref="GI:28868044" FT /translation="MRATSRGFTLIELMIVVAIVGILAAIAYPSYTEYVKRTQRSAVA FT SLLSEQVQALERFYSQKGNYADYKGVVGGNAYYTITPVLNATDFTLTAAPTGGTMMAG FT DKCGSFVITNTGARSNSGATTGVTTKDCWGR" FT /colour=0 255 0 FT CW_VIR_gene 881303..881704 FT /gene="PSPTO0816" FT /colour=0 255 0 FT CDS complement(889587..890927) FT /gene="pilR" FT /codon_start=1 FT /transl_table=11 FT /product="type 4 fimbriae expression regulatory protein FT pilR" FT /protein_id="NP_790670.1" FT /db_xref="GI:28868051" FT /translation="MSQRQKILIVDDEPDIRELLEITLGRMKLDTRSARNVAEAHDWL FT AREPFDMCLTDMRLPDGNGLELVQHIQHGYPHVPVAMITAHGNLDTAIHALKAGAFDF FT VTKPVDLNRLRELVNSALSLPSATQPVHSIDSRLLGDSPPMRTLRNQIGKLARSQAPI FT YISGESGSGKELVARLIHEQGPRIDKPFVPVNCGAIPSELMESEFFGHRKGSFSGAHE FT DKPGLFQAAHNGTLFLDEVADLPLAMQVKLLRAIQEKSIRSVGGQQEQVVDVRILCAT FT HKDLNIEVAAGRFRQDLYYRLNVIELRVPSLRERREDIDQLAASVLRRLAGNGAQPVA FT RLHAHALETLKSYRFPGNVRELENMLERAYTLCENYEIHASDLRLAESASPQAQQGAN FT LADIDNLEDYLESIERTLILQALEETRWNRTAAAERLSLSFRSLRYRLKKLGLD" FT /colour=0 255 0 FT CW_VIR_gene complement(889587..890927) FT /gene="pilR" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0823" FT CDS complement(890930..892525) FT /gene="pilS" FT /codon_start=1 FT /transl_table=11 FT /product="sensor protein PilS" FT /protein_id="NP_790671.1" FT /db_xref="GI:28868052" FT /translation="MTAETPSLTSPQAQRILRLYHLYRLTIGVVLVLLISSSLETELL FT QLANPNLFRSGCWLYLVFNILVVVLLERPSRQAQLFGLAMTDAIMLSGLFYAAGGPSS FT GIGNLLIASVAISNVLLRGRIGLLIAAVSAIGIIYLTFYISFGTPSVSNDYVQAGSLG FT ALCFAAALLVQALTARLQVSEGLAEQRAADVDSLEELNALILQRMRTGIVVLDARRQV FT VLANQGALTLLGHERLVGQVIDAYSPQLVERLRQWLINPIMVPRSITTSSIGPVLQPS FT FAALNRGDQRQTLIFLEDLSQIAHQAQQLKLAALGRLTAGIAHEIRNPLGAVSHAAQL FT LNESEDLSAPDRRLGQIIHDQSQRIDRVIENVLQLSRRREAQPELLDLKVWLENFVSD FT FRSSAAADQSIHVQISSGMLTTRMDAGQLTQIITNLVQNGLRYSRRNHPSAQVWLNLH FT HDRESDLPILEVLDDGPGVSEQHLSKIFEPFFTTESKGTGLGLYLSRELCESNQAHLE FT YIPRPHDGGSCLRITFAHPFKTS" FT /colour=0 255 0 FT CW_VIR_gene complement(890930..892525) FT /gene="pilS" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0824" FT VR_#24 897500..997250 FT /colour=255 255 0 FT tRNA 898785..898860 FT /gene="tRNA-Asn-1" FT /product="tRNA-Asn" FT /note="codon recognized: AAC" FT tRNA 898890..898966 FT /gene="tRNA-Pro-1" FT /product="tRNA-Pro" FT /note="codon recognized: CCA" FT tRNA 898972..899047 FT /gene="tRNA-Lys-1" FT /product="tRNA-Lys" FT /note="codon recognized: AAA" FT tRNA 899143..899219 FT /gene="tRNA-Pro-2" FT /product="tRNA-Pro" FT /note="codon recognized: CCA" FT CDS complement(899534..900991) FT /pseudo FT CDS complement(903025..903834) FT /gene="PSPTO0832" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO54372.1" FT /db_xref="GI:28851294" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT CDS complement(903025..903834) FT /codon_start=1 FT /locus_tag="PSPTO0832" FT /orf_name="PSPTO_1658" FT /product="ISPsy4, transposition helper protein " FT /function="ATP binding" FT /function="nucleoside-triphosphatase activity" FT /protein_id="AAO54372.1" FT /db_xref="EMBL:AAO59129.1" FT /db_xref="GO:0005524" FT /db_xref="GO:0017111" FT /db_xref="HOGENOM:HBG317578" FT /db_xref="InterPro:IPR001270" FT /db_xref="InterPro:IPR002611" FT /db_xref="InterPro:IPR003593" FT /db_xref="TIGR:PSPTO0018" FT /db_xref="TIGR:PSPTO0056" FT /db_xref="TIGR:PSPTO0193" FT /db_xref="TIGR:PSPTO0291" FT /db_xref="TIGR:PSPTO0832" FT /db_xref="TIGR:PSPTO0864" FT /db_xref="TIGR:PSPTO1096" FT /db_xref="TIGR:PSPTO1658" FT /db_xref="TIGR:PSPTO2322" FT /db_xref="TIGR:PSPTO2388" FT /db_xref="TIGR:PSPTO2741" FT /db_xref="TIGR:PSPTO3014" FT /db_xref="TIGR:PSPTO3225" FT /db_xref="TIGR:PSPTO3432" FT /db_xref="TIGR:PSPTO3607" FT /db_xref="TIGR:PSPTO4014" FT /db_xref="TIGR:PSPTO4270" FT /db_xref="TIGR:PSPTO4626" FT /db_xref="TIGR:PSPTO4729" FT /db_xref="TIGR:PSPTO4768" FT /db_xref="TIGR:PSPTO5370" FT /db_xref="TIGR:PSPTO5576" FT /db_xref="TIGR:PSPTOB0039" FT /db_xref="UniParc:UPI0000002D48" FT /db_xref="UniProtKB/TrEMBL:Q877S2" FT /transl_table=11 FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEKL FT LAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAENI FT VFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRVVMA FT PGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQTLTAA FT MLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(903025..903834) FT /gene="PSPTO0832" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO54372.1" FT /db_xref="GI:28851294" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(903831..904853) FT /gene="PSPTO0833" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO54373.1" FT /db_xref="GI:28851295" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(903831..904853) FT /gene="PSPTO0833" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO54373.1" FT /db_xref="GI:28851295" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT promoter 905339..905371 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 911777..912136 FT /gene="PSPTO0842" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54380.1" FT /db_xref="GI:28851302" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 911777..912136 FT /gene="PSPTO0842" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54380.1" FT /db_xref="GI:28851302" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(912397..913374) FT /gene="PSPTO0844" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54381.1" FT /db_xref="GI:28851303" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(912397..913374) FT /gene="PSPTO0844" FT /colour=178 58 238 FT CDS complement(920451..921692) FT /gene="hopAJ1" FT /locus_tag="PSPTO0852" FT /note="previously known as hopPmaG (PMID 11872842; Guttman FT et al, 2002); similar to GP:19071492; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAJ1" FT /protein_id="AAO54387.1" FT /db_xref="GI:28851309" FT /translation="MRSRVITTSLVVIMLSCASAAPACFSADMTPSVSNESTSEADFQ FT QWLATFRSNATTKGIDTATLDLAFQNITLDPTVHQLDMAQPEFTTAIWDYLSERLTPK FT NIQQGQELLQKEPVLNEVERHYGVDAKIIAAIWCIESGYGKDIGSRDVIRSLATLAYK FT GRRMDYGATQLMAALHIVQNKDIARAQLIGSWAGAMGQTQFIPTTYLDYAVDFNHDNR FT RDVWSSRADALASTASYLQRSAWNSRVSWGQEVQLPENFDYAQADMSIKKPVAEWQRL FT GVMGTKQAIPGELAQEQASVLLPAGYRGPAFMVLSNFRSILRYNNSTAYALTIGLLAD FT SYAGGTGVSHPWPTDNPPLGSIAQVTDLQKLLTAKGYSLGAADGVIGAMTRAAIRAYQ FT KDQHLPPDGYASTVLLESLRR" FT /colour=255 0 0 FT CDS complement(920451..921692) FT /old_locus_tag="PSPTO0852" FT /codon_start=1 FT /gene="hopAJ1" FT /locus_tag="PSPTO0852" FT /orf_name="PSPTO_0852" FT /product="Type III effector HopAJ1" FT /biological_process="peptidoglycan metabolism" FT /protein_id="AAO54387.1" FT /db_xref="GO:0000270" FT /db_xref="HOGENOM:HBG251560" FT /db_xref="HSSP:1LTM" FT /db_xref="InterPro:IPR002477" FT /db_xref="InterPro:IPR011970" FT /db_xref="TIGR:PSPTO0852" FT /db_xref="UniParc:UPI00000085BB" FT /db_xref="UniProtKB/TrEMBL:Q889A9" FT /transl_table=11 FT /translation="MRSRVITTSLVVIMLSCASAAPACFSADMTPSVSNESTSEADFQQ FT WLATFRSNATTKGIDTATLDLAFQNITLDPTVHQLDMAQPEFTTAIWDYLSERLTPKNI FT QQGQELLQKEPVLNEVERHYGVDAKIIAAIWCIESGYGKDIGSRDVIRSLATLAYKGRR FT MDYGATQLMAALHIVQNKDIARAQLIGSWAGAMGQTQFIPTTYLDYAVDFNHDNRRDVW FT SSRADALASTASYLQRSAWNSRVSWGQEVQLPENFDYAQADMSIKKPVAEWQRLGVMGT FT KQAIPGELAQEQASVLLPAGYRGPAFMVLSNFRSILRYNNSTAYALTIGLLADSYAGGT FT GVSHPWPTDNPPLGSIAQVTDLQKLLTAKGYSLGAADGVIGAMTRAAIRAYQKDQHLPP FT DGYASTVLLESLRR" FT /color=255 0 0 FT gene complement(920451..921692) FT /gene="hopAJ1" FT /locus_tag="PSPTO0852" FT /colour=255 0 0 FT promoter complement(921879..921911) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT gene complement(922509..922756) FT /gene="hopAT1" FT /locus_tag="PSPTO_5618" FT /note="type III effector protein hopAT1; this region FT contains premature stop codons or frameshifts; identified FT by sequence similarity, degenerate; similar to PSPPH_5225 FT (GI:76008346)" FT /pseudo FT /colour=255 0 0 FT CDS complement(935655..936464) FT /gene="PSPTO0864" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO54399.1" FT /db_xref="GI:28851321" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(935655..936464) FT /gene="PSPTO0864" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO54399.1" FT /db_xref="GI:28851321" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(936461..937483) FT /gene="PSPTO0865" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO54400.1" FT /db_xref="GI:28851322" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(936461..937483) FT /gene="PSPTO0865" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO54400.1" FT /db_xref="GI:28851322" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT promoter complement(939413..939445) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter 941100..941132 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 941204..941721 FT /pseudo FT /colour=178 58 238 FT /note="fragement of ISPssy" FT CDS 942019..943119 FT /codon_start=1 FT /locus_tag="PSPTO0873" FT /orf_name="PSPTO_0873" FT /product="Amidinotransferase family protein " FT /function="transferase activity" FT /protein_id="AAO54407.1" FT /db_xref="GO:0016740" FT /db_xref="HOGENOM:HBG124548" FT /db_xref="HSSP:1JDW" FT /db_xref="InterPro:IPR003198" FT /db_xref="TIGR:PSPTO0873" FT /db_xref="UniParc:UPI00000085CD" FT /db_xref="UniProtKB/TrEMBL:Q888Z1" FT /transl_table=11 FT /translation="MSYQKAEPAYFTTTQSPVEVYTEWDPLEEVIVGIMDDIRVPDWDI FT GLKAIIPKESSDFFMTYSGRRFPEELLVKARQEVNTLARILETEGVRVKRPNESNHHQP FT IMTPHFTTGGTFYSAMPRDCLFAIGKKIIEVPMAWRSRYFETFAFRDLLNDYFSQGAEW FT IAAPKPMLKDDVWQPNYDFEQELPFRSIITEVEPLFDAADFMKMGRDIIGQRSHVTNNK FT GIEWLRRTLGPDYRVHIYEFEEPGPMHIDTTILPLAPGRVLINKDWVPQIPDIFKDWEI FT LNPPPSNLPDDHPLFITSKWIHTNVLMLDERTVVVEKDEEALISAFRKWGFETILCPFK FT HFQSFGGSFHCATLDVKRRGGLHRYI" FT CDS 943206..944459 FT /codon_start=1 FT /locus_tag="PSPTO0874" FT /orf_name="PSPTO_0874" FT /product="Nikkomycin biosynthesis domain protein " FT /function="ATP binding" FT /function="catalytic activity" FT /protein_id="AAO54408.1" FT /db_xref="GO:0003824" FT /db_xref="GO:0005524" FT /db_xref="HOGENOM:HBG493165" FT /db_xref="InterPro:IPR011761" FT /db_xref="TIGR:PSPTO0874" FT /db_xref="UniParc:UPI00000085CE" FT /db_xref="UniProtKB/TrEMBL:Q888Z0" FT /transl_table=11 FT /translation="MRPTKKILVVSSELDAAKTVRDVKTMYPSATWDFIFLLEDFLGVA FT NDELKCPEHFIVRDFADTAGMMAVLEVIAQQHVISQVVPSDEFSVYIAALANDRWDLPG FT ITREKAKSFRDKKAMKEIAQHAGIRTAREITLSDIEGGHVEFPVVVKPRSLAGSMGVKI FT VTEAKQLTEMDVDWGAAYRDMDERQYMIEQYNPNTIYHIDCIVLKGHLSFISVGQYLGK FT PIDFLQEKPIGVLSVPDQAVEDTWRPFAESVINAFEAPEGVYHIEAFADAGFGLELLEI FT AYRPGGAAIVEMIEMVHGLNLKCIHLAAQLGLVDYVDSQRQEEAFGYMTFPKKHLSTEA FT LYVTQIFLPPLESMPTLRTHVVPALGDIASGEFYCYKDSLGSFVFCGDRDLVSRDVHYL FT SEHYSVKVAAKNSPPFEE" FT CDS 944512..945756 FT /codon_start=1 FT /locus_tag="PSPTO0875" FT /orf_name="PSPTO_0875" FT /product="Hypothetical protein" FT /function="ATP binding" FT /function="catalytic activity" FT /protein_id="AAO54409.1" FT /db_xref="GO:0003824" FT /db_xref="GO:0005524" FT /db_xref="HOGENOM:HBG493165" FT /db_xref="InterPro:IPR011761" FT /db_xref="TIGR:PSPTO0875" FT /db_xref="UniParc:UPI00000085CF" FT /db_xref="UniProtKB/TrEMBL:Q888Y9" FT /transl_table=11 FT /translation="MDKNKPNTILIVSSELDVSEVVSRIRSLYPIDAWTFIYLLEDLLG FT QAGEALNRDGHFVIRDFAVHTEVEKVFGQIARKYSVTAVIPNDEFAVYIAAWANDCWQL FT PGLTFDVATRFRDKRRMKKIAQKFNIPTAKELSLDDINRGGATFPVILKPRSLAGSVGV FT RIITEVQQLSEAYATEIDDYQDMNEHQYLIETYNSQPLYQIDAVVLKGQLAFLSAGKYL FT GKPIDYLAECPLGYFSLAEDDLHTLWRPFIERVLSAFEGPDGVYHIEAFGDAGDGFELL FT EIAYRPGGASTVDMIKIAYGIDLRFIHLAVQLGLVDALHVDRKGEAFGYMTFPKKHLAK FT EMLYVTRVSLSSMETLQTLKMKKIAQVGDIASGEFFCHKDCLGAFVFCGDRGSVAHDLK FT HVEEHYQVHAEAARG" FT promoter 946154..946185 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 946222..948339 FT /gene="hopD1" FT /locus_tag="PSPTO0876" FT /note="previously known as HopPtoD1 (PMID 12032338; FT Petnicki-Ocwieja et al, 2002); similar to GP:14905934; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopD1" FT /protein_id="AAO54410.1" FT /db_xref="GI:28851332" FT /translation="MNPLRSIQHNIATPPISGGQPLDAVGPQAQQSHPKRISPSQLSQ FT SAHQALERLSANAEHQRLASLVRNALQDGTFQFQSSNHTQVTYKASICLPADTDTVRT FT DHLINNELTVQARLNDQSEYDIVSAHLHGSSKAISFDVPSPPPAHGSASSVLSERTHL FT GMSRVLSQDAVDSSSLETPLLSSPDHSRPPSQPKPVHIGSVRRDSGSLVSDNPVVQAL FT LSFAQADQAFPPQAASIAGVQLEMRPRRDIEKALEEFKGAFTVVKAQLMSGANSSERV FT DEDVNADIHIPLLLKAIERGAAAFGPNASIGQNSAKAFLASCAPKITSNDDVLSEFIN FT QKLKGDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAI FT FGKNFSPSQYALQLAGIDSVPPLIIESMDTMCVLAIIKGMKGEEWSMSDLLPKALKAG FT AISSVVSFPNNVLQYAGFKSRVGDLAANSVTTEAAIFGAASGIPPEVKESEELMRAGL FT FQSMKDGVMAHSGEGVDTKKTIERMTRHALDIAPGESTAVKSMGLASIVGMIPLIASN FT KATGLLSEQVLRIFRSAVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVVQTILA FT RASQHMEAGDRDISAEELHQMLAPRSEFLRHVGSAIVNGMNASFEAIPALVRKLGYGE FT APLAERIPYQDLAVPDTSRQPAP" FT /colour=255 0 0 FT gene 946222..948339 FT /gene="hopD1" FT /locus_tag="PSPTO0876" FT /colour=255 0 0 FT CDS complement(948455..949798) FT /gene="hopQ1-1" FT /locus_tag="PSPTO0877" FT /note="Previously known as ORF19 (PMID 12032338; FT Petnicki-Ocwieja et al, 2002) and HolPtoQ (PMID 11872842; FT Guttman et al, 2002); similar to GP:17427254, and FT GP:19071520; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopQ1-1" FT /protein_id="AAO54411.1" FT /db_xref="GI:28851333" FT /translation="MHRPITAGHTTSRLILDQSKQISRTPSESSAQSALSQQASMSSP FT VLERSKSAPALLTAAQRTMLAQVGACNAHLTSDENMAINELRSHKPLLPKDTWFFTDP FT NKDPDDVVTYTLGKQLQAEGFVHITDVVATLGDAEVRSQRAEMAKGVFNKLELHDVHV FT SRGRDYAMNSLQSKEHAKFLLEGHALRAGPGEIHRDSLQDMSRRLARAPHGVGIVVIA FT GMSDINALITTCPDMVRERVDDITIMGGVEPLKDADGFVQPDARAYNNATDMDAARSL FT YRKAQELGIPLRIVTKEAAYKTAVSPSFYEGIAGSGHPVGHYLRDVQKSALKGLWEGI FT QAGLLPGLDDSWFFRTFMPNAQIEAAQLDKNKESSFEDIWPKVTKLNLYDPLTLLASV FT PGAAKLLFKPKAIHTEGFGVVEQVGPDDVTHPEKAKLLMSALAKSALVQSTVAPD" FT /colour=255 0 0 FT gene complement(948455..949798) FT /gene="hopQ1-1" FT /locus_tag="PSPTO0877" FT /colour=255 0 0 FT promoter complement(949826..949858) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter 954203..954234 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 954407..960280 FT /gene="hopR1" FT /locus_tag="PSPTO0883" FT /note="Previously known as HolPtoR; similar to FT GP:17431754, and GP:19071522; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopR1" FT /protein_id="AAO54417.1" FT /db_xref="GI:28851339" FT /translation="MVKVTSSGFTANPLSHHADSVSPANSPPQLPEPVHLVDLSESSR FT KGGMRNRPHASLNSQVLELQAVPSQRGKHVRVRSHADGESVINAWLAKRPSVQSETSL FT DNDGKLVRYTPVNHEPLAPRNEAFFTSVPGMLMAVLTVHPEMEHGISGDITADAVAAR FT LAEPPIGLLTGIWQSSHDRAYLERGGVVHTANMEERWAPLTLPGINPREPLRMAGLQA FT DGGVYLHNGSQLWRLTETAAESVTTENLPEGAAVRIGAGGEVHGLHEGALHSNGISRP FT IELWRPKAGAPGREQSPARPVDLLPLPGGTAALILDDKGRIYHADLKGTGAVEAHRLK FT LPADFAQGKGWAVTAMGLSRDDTVHLMLQDQNGRRMSLQRAPGEALFRPAYLLDRPLL FT LLYTEGLHVPSEAAVQSHVQLDGHAQLGHIDGVLHYKAAPDQSWERLKQSGGEPLTGL FT TALYSSPLGFIDRKPVFALVGDARQVVELKLEGRTSWLPSDAELPRHPAGGPLAVIPD FT TVALRTSPIAQFDEPVQALAVHGNRRVVALTDSGRLMAADADTPARRLPTLQRPIAIA FT VGLNDQLLVLHHPHSQRPQLKRLSAKDDWEPVPIILPGIVHPSSLRATRTGQIQVQLG FT ENWHTLLPSMTSHDNQRLPARVKPEPEGDEAPSANFLAGSNALANQQQASRISTPHHD FT ASVVTTLAGTTANNPLTMASSLQAVVDTTRAQVGALARDVVGAAANSTMRAMAHTLGV FT VLPPTPQEKRLASFHNEAKQAYTSGKILFEHLPSLAQVRVASAVGPSDGERFGLSHQQ FT TQRLLTLREGKLEALLRDLRKIGFHEGVIMGDMGDSDSAHGLVSTTSTPTFRLAELWR FT RQHSRVDKALSSAGLSRSEDIFPDLNLSINALAGGAALNADRMSEREAELLSVLCEVS FT EKMMRAGVRLPADDGSVDSAHSQAPYGLRTAGLIAGLVDYDALLSSTDAQALEMAERL FT QQDARLAALCKLGLSSWGQLAAFDDVVTTFREQISLPGSARRTQLLKNLGLPPDAAPD FT EMAARMSDLLLDLFNRSTFFSTQSRGLELRGSLGSADWKHLNAFSVGVTGEALQVLGV FT ERIGDGKDGDAGLVAFFVRHAKASVSATSGIGIDFKPGPGTGGRVIDSRPGRSMNSTW FT GGSTNLGISGAYQHGQGAAVIIAPSTISDFVRLLFDVNHPDTTQILRTGVNGGSIGLD FT LFETNVNASVGANVSVSPFSLSQKYGPQKPTADAAVSGPDNRRSTASGSLSVGGTAQA FT GAHWGQMELHLDHAWADIIGLEFQGRTDFNLEFNSGLNLGGALSSALGDNPQKLINAS FT TGNGNLQLAGIRVASSDVQLPTDAVVDDKRRGPFLSTASYKRTFDTEVAKPVTAGEWS FT QMRQRLAKAFPDNIAELGALDYPTRPGERIATIKQVIDRIQGAKARSVEAVGAMDGKA FT LHRQRFDAAREMSNAGNSVWRASSEIERASIVEMLHQLRQQEQSAVQNHARAIPGARV FT EFNLFGRESLETVVFHAIGHLGLGSKLNDLAELRRKVPGLDQVMLSFQSLPKVNQVRY FT VFEMRPQARFAINDALLAREQQASARALGLQGPSGSELNWRGVLDKIKTTPDLYRLAA FT IAVHNTDENPVTSRIGLPLLNVSATGATSHQLFEAEIQFRYGLYDGLQGVELLEAGNR FT ALQSPLRALQQSGIQALGQRTQAGEVAYGPPSPRKESPLRTAVDAAALTTSDIARQLE FT VKVQRMNTAHEREANAISSFQQAYGIASAHLDRLLLRIPELPLPEIDDRDVDGGRVRG FT TFASLQRHHQALDDAISAMHQASEKVYTIPGKQATQEQDPALAQLLSVEKRRRSLGHA FT LETLAGRGVEAGTATGLELNRVSSQVNDLVARRDALLRQRESGVQEGGLDSEELEMEL FT QLTTSVLQRLRADLLGERQAMEATAKRLDQASRAALEGERSFSDAVRDRAWGELDNV" FT /colour=255 0 0 FT gene 954407..960280 FT /gene="hopR1" FT /locus_tag="PSPTO0883" FT /colour=255 0 0 FT promoter 981177..981209 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 981500..981958 FT /gene="hopAG1" FT /locus_tag="PSPTO0901" FT /note="this region is disrupted by an IS element FT insertion, interruption-N; this region is similar to the FT N-terminal region of HopAG1 in Pseudomonas syringae FT syringae; previously known as ORF28 (PMID 12032338; FT Petnicki-Ocwieja et al, 2002)." FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAG1" FT /protein_id="AAO54435.1" FT /db_xref="GI:28851358" FT /translation="MNPITHSFSHLGFSNAQSTSALAPGGNKVPNFVSRGRGKGVPLE FT HFNTADEYRLARQQGGVLKSIDGREFMLLLQKYTAAETSDEEFADLRAAIPRYSIDLA FT EPGQTKVLYRGISLPEKTAARLLNISWGYESREIAHGLIHGLRVVKEGLK" FT /colour=255 0 0 FT gene 981500..981958 FT /gene="hopAG1" FT /locus_tag="PSPTO0901" FT /colour=255 0 0 FT CDS complement(982088..983065) FT /gene="PSPTO0902" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54436.1" FT /db_xref="GI:28851359" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(982088..983065) FT /gene="PSPTO0902" FT /colour=178 58 238 FT CDS complement(983280..984257) FT /gene="PSPTO0903" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54437.1" FT /db_xref="GI:28851360" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(983280..984257) FT /gene="PSPTO0903" FT /colour=178 58 238 FT CDS 986113..987381 FT /gene="hopAH1" FT /locus_tag="PSPTO0905" FT /note="previously known as HolPtoAH (PMID 12615215; FT Greenberg and Vinatzer, 2003); identified by match to PFAM FT protein family HMM PF02987" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAH1" FT /protein_id="AAO54439.1" FT /db_xref="GI:28851362" FT /translation="MSMNTSVSNNGPVWSPVSSGNHAPSPDFSGKSSSNAVHFLSPES FT AHRSPSAVSWGNSTPTAATTGNGRAGGAGQSGLVEALKTLIYALLKSVIGNASAHNRS FT ESQPSASPGNGHGQASTCSAASPTSGSNPSQQPSDTPAFNSAGLGAHGGANTVPDRIA FT SPDAARKMVEDVKNAGGGTLRIQMTHDQINDPAQMAKLKAMVDAGDKQGVKVQFTFRD FT NANGGGGNVLTGDKLKQAADDVKNVVSALGKHPSFVLDTFNEGGKSATQDWANMQSTL FT IKSARDAGYKGDIVVEDSNWGGGLTAGGESGLVKYAAQLKAANGSNNPGLIGSIHEYA FT SGADASSRLGSEIKALSGAGFKPQIGEVGNANWTGGSNFEQRDGANQAVKDNMGALKA FT AGADVLPWMDQFQGGKIKHDVGFSKGDQFS" FT /colour=255 0 0 FT gene 986113..987381 FT /gene="hopAH1" FT /locus_tag="PSPTO0905" FT /colour=255 0 0 FT CDS 987569..988354 FT /gene="hopAI1" FT /locus_tag="PSPTO0906" FT /note="previously known as HolPtoAI (PMID 12615215; FT Greenberg and Vinatzer, 2003); similar to SP:P21456, FT GB:M33318, GB:X13897, GB:X13929, GB:X06401, GB:X13930, FT SP:P11509, SP:P20853, PID:180987, PID:29547, PID:30332, FT and PID:825700; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAI1" FT /protein_id="AAO54440.1" FT /db_xref="GI:28851363" FT /translation="MLALKLNTSIAQAPLKKNAEAELRHMNHAEVRAHTPTRFTLNHR FT APTYEVAQSALGENHGGWTAVNKFKVTESEVFIHMERSDSRSKGDFAGDKIHLSVAPQ FT HVASAFNAIGKILQADDSPVDKWKVTDMSCASSDLQPEKKRVTQGAQFTLYAKPDRAD FT NTYSPEYMGKMRGMISSIERELHTAGVQQSNNRPASDVAPGHWAYASYRNEHRSERAG FT SSSQANELEKEPFFQLVSFPDVAASPVKSGASSRSLMPPPWTR" FT /colour=255 0 0 FT gene 987569..988354 FT /gene="hopAI1" FT /locus_tag="PSPTO0906" FT /colour=255 0 0 FT VR_#25 1000000..1012500 FT /colour=255 255 0 FT VR_#25 1000418..1013225 FT /colour=255 255 0 FT CDS complement(1003193..1004065) FT /gene="pilD" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus prepilin peptidase PilD" FT /protein_id="NP_790763.1" FT /db_xref="GI:28868144" FT /translation="MPLLDLLASSPLAFVTTCCLLGLIVGSFLNVVVYRLPKMMERDW FT KVQSREMLGLPAEPDQPVFNLILPHSSCPHCAHKIRPWENLPVISYLLLRGKCSQCKA FT PISKRYPVVELTCAVLSAYVAWHFGFGWQAAAMLVLSWGLLAMSLIDADHQLLPDSLV FT LPLLWLGLIVNAFGLFTSLSDALWGAVAGYLTLWSVFWLFKLVTGKEGMGYGDFKLLA FT MLGAWGGWQILPLTILLSSLVGAVLGVIMMRVRRVESGTPIPFGPYLAIAGWIALLWG FT GQITDSYMQFAGFR" FT /colour=0 255 0 FT CW_VIR_gene complement(1003193..1004065) FT /gene="pilD" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0924" FT CDS complement(1004067..1005284) FT /gene="pilC" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilC" FT /protein_id="NP_790764.1" FT /db_xref="GI:28868145" FT /translation="MASKAVKVIVYTWEGVDKKGTKTSGELSGHNLALVKAQLRKQGI FT NPTKVRKKSVSIFGKGKKIKPLDIAFFSRQMATMMKAGVPLLQSFDIISEGAENPNMR FT TLVDSLKQEVSAGNSFATALRRKPEYFDELFCNLVDAGEQAGALESLLDRVASYKEKT FT EKLKAKIKKAMTYPAAVLIVAVIVSGILLIKVVPQFQSIFASFGADLPAFTLMVIGLS FT DIVQKWWLIIVIAFFATIFMLKRAYKKSQNFRDALDRFLLKLPIIGPLIFKSSVARYA FT RTLATTFAAGVPLVEALDSVAGATGNVVFKNAVNRVKQDVSTGMQLNFSMRSTGVFPS FT LAIQMTSIGEESGALDAMLDKVATYYEEEVDNMVDNLTSLMEPMIMAILGVIVGGLVI FT AMYLPIFKLGNVV" FT /colour=0 255 0 FT CW_VIR_gene complement(1004067..1005284) FT /gene="pilC" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0925" FT CDS complement(1005287..1006981) FT /gene="pilB" FT /note="similar to SP:P22608; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilB" FT /protein_id="NP_790765.1" FT /db_xref="GI:28868146" FT /translation="MTDAVLTGLAKQLVLAELLTEPVAQQAYQQARRDKISLVSYLVQ FT NKLVKSLTLAELASDQFGVPFMDLASLDKESQPKGLVSEKLVRQHHALPLWRRGNKLF FT IGISDPTNHQAVTDIQFSTGLNTEAILVEDDKLTTAIDRFFDSDSGLGNLEDVDLGLD FT IEPADGKETSLATQNDADDAPVVRFVNKMLLDAIRLGSSDLHFEPYEKIFRVRLRTDG FT ILHEVARPPIHLANRIAARLKVMASLDISERRKPQDGRVKLRVSKTKAIDFRMNTLPT FT LWGEKIVMRILDPTSAQMGIDALGYEPEQKALYLEALKQPQGMILVTGPTGSGKTVSL FT YTGLNILNTVDINISTAEDPVEINLEGINQVNVNPRQGLDFSQALRAFLRQDPDVIMV FT GEIRDLETAEIAIKASQTGHMVLSTLHTNSAAETLTRLHHMGVAAFNIATAINLIIAQ FT RLARKLCSHCKKELDIPRETLIREGFPEAKIGTFKIYGPVGCEHCNGGYRGRVGIYEV FT VKKTAELERIIMEEGNSLEISRQMRKDGFNDLRTSGLSKAMQGITSLEEVNRVTKD" FT /colour=0 255 0 FT CW_VIR_gene complement(1005287..1006981) FT /gene="pilB" FT /colour=0 255 0 FT /note="locus_tag: PSPTO0926" FT CDS 1007206..1007634 FT /gene="PSPTO0927" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein" FT /protein_id="NP_790766.1" FT /db_xref="GI:28868147" FT /translation="MNAQKGFTLIELMIVVAIVGILAAVAIPSYQNYAKKAAYTEVLA FT AMASVKTAVGVCAAQQGTVADCDTAAKVGVTLPSGATTGAVNKMEITATSAAITATPN FT AFKGILTTDTCSLTPAIAAAGSPVTWSYTGACVTNGYVKN" FT /colour=0 255 0 FT CW_VIR_gene 1007206..1007634 FT /gene="PSPTO0927" FT /colour=0 255 0 FT promoter complement(1014826..1014858) FT misc_feature 1052965..1053091 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="7.9e-11" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=33.600000 FT CDS complement(1053296..1054756) FT /gene="PSPTO0968" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54502.1" FT /db_xref="GI:28851425" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(1053296..1054756) FT /gene="PSPTO0968" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54502.1" FT /db_xref="GI:28851425" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT VR_#26 1069934..1080460 FT /colour=255 255 0 FT VR_#26 1070000..1080000 FT /colour=255 255 0 FT rRNA 1072092..1073609 FT /gene="Ps16SC" FT /product="16S ribosomal RNA" FT tRNA 1073713..1073789 FT /gene="tRNA-Ile-3" FT /product="tRNA-Ile" FT /note="codon recognized: AUC" FT tRNA 1073834..1073909 FT /gene="tRNA-Ala-3" FT /product="tRNA-Ala" FT /note="codon recognized: GCA" FT rRNA 1074153..1077055 FT /gene="Ps23SC" FT /product="23S ribosomal RNA" FT rRNA 1077203..1077322 FT /gene="Ps5SC" FT /product="5S ribosomal RNA" FT VR_#27 1107227..1139995 FT /colour=255 255 0 FT CDS 1109641..1110651 FT /old_locus_tag="PSPTO1015" FT /codon_start=1 FT /locus_tag="PSPTO1015" FT /orf_name="PSPTO_1015" FT /product="Integrase/recombinase XerC, putative" FT /function="DNA binding" FT /biological_process="DNA integration" FT /biological_process="DNA recombination" FT /protein_id="AAO54548.1" FT /db_xref="GO:0003677" FT /db_xref="GO:0006310" FT /db_xref="GO:0015074" FT /db_xref="HOGENOM:HBG305458" FT /db_xref="HSSP:1A0P" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="TIGR:PSPTO1015" FT /db_xref="UniParc:UPI0000008658" FT /db_xref="UniProtKB/TrEMBL:Q888K3" FT /transl_table=11 FT /translation="MASIASYEHVLHRYPSVQQWLALLGNLGRAPATLDAYGRGLAHYL FT LHCEASGLEAESITFEQVTLYIRRLLPGQENAVANSTLHQRLTAIRLWYDHLVFQGRCA FT QNPVPRGQHGRLCQIPGHSGFVRGLVPRLIKLPDIPTDEQWRYFLSIAARSSIRDRLML FT SLAYCGALRRAELVGLRIEDLDLAHRLISVRAETTKGRRSRVVCYSPDIAPILGTHLHA FT LRLAGWSKGALFRSESDRNRGSALTRWTWSKTVERWARDSNLSCLSTHTFRHLRLTHLA FT RAGWKLHELTAYAGHRDPKTTLIYVHLSGADLTARLAHSVGSLDARLFAELFKSE" FT /color=178 58 328 FT CDS 1112173..1112532 FT /gene="PSPTO1017" FT /note="Note that this gene lacks an association with an FT ORF2, the transposase, as is found in other versions of FT this multicopy insertion sequence.; similar to GP:8037784; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54550.1" FT /db_xref="GI:28851473" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 1112173..1112532 FT /gene="PSPTO1017" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="Note that this gene lacks an association with an FT ORF2, the transposase, as is found in other versions of FT this multicopy insertion sequence.; similar to GP:8037784; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54550.1" FT /db_xref="GI:28851473" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 1112778..1113137 FT /gene="PSPTO1019" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54551.1" FT /db_xref="GI:28851474" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT CDS 1112778..1113137 FT /old_locus_tag="PSPTO1019" FT /codon_start=1 FT /locus_tag="PSPTO1019" FT /orf_name="PSPTO_1099" FT /product="ISPsy5, Orf1" FT /protein_id="AAO54551.1" FT /db_xref="HOGENOM:HBG319659" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="InterPro:IPR008878" FT /db_xref="TIGR:PSPTO0036" FT /db_xref="UniParc:UPI00000082B7" FT /db_xref="UniProtKB/TrEMBL:Q877K1" FT /transl_table=11 FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVLF FT VFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGFDL FT WRNRPHKILTPRFVA" FT /color=178 58 328 FT MBL 1112778..1113137 FT /gene="PSPTO1019" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54551.1" FT /db_xref="GI:28851474" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 1113155..1114708 FT /gene="PSPTO1020" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54552.1" FT /db_xref="GI:28851475" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT CDS 1113155..1114708 FT /old_locus_tag="PSPTO1020" FT /codon_start=1 FT /locus_tag="PSPTO1020" FT /orf_name="PSPTO_1227" FT /product="ISPsy5, transposase" FT /protein_id="AAO54552.1" FT /db_xref="HOGENOM:HBG324930" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="InterPro:IPR004291" FT /db_xref="TIGR:PSPTO0035" FT /db_xref="UniParc:UPI00000082B6" FT /db_xref="UniProtKB/TrEMBL:Q877T3" FT /transl_table=11 FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLKE FT QIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRKPL FT SADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGCRGC FT ESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQTLAR FT WIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQASGPPDH FT KVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHARRKFVE FT AQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQLKSWLDK FT TQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIGRKAWLFSD FT TPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLPWNCSPEMPR FT " FT /color=178 58 328 FT MBL 1113155..1114708 FT /gene="PSPTO1020" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54552.1" FT /db_xref="GI:28851475" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(1115514..1116344) FT /gene="hopAM1-1" FT /locus_tag="PSPTO1022" FT /note="also known as avirulence protein AvrPpiB1; similar FT to GP:886702, and GP:886702; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAM1-1" FT /protein_id="AAO54553.1" FT /db_xref="GI:28851476" FT /translation="MHANPLSSFNRAQHGNLTNVEASQVKSAGTSSTTNIDSKNIEEH FT VADRLSDLGRPDGGWFFEKSLGTLKNLNLEQLAGIHDVLKLTDGVKNIVSFGAREGGF FT ELAMQFRHDLYRSQHPDENSPHDAATHYLDAISLQSNKFTKLEKLQHVDVFKMQNPFW FT DVGYKNGIAHAKKMAFFITPEWLGSDFCKQEFQWLSETKNKDIKSAFVIFKDVDLKSK FT NMTSIFNFADFHKSRVMMASTPPESGLNNVKIENSVDLNFKRLLTDRESWELNNFLGD FT " FT /colour=255 0 0 FT gene complement(1115514..1116344) FT /gene="hopAM1-1" FT /locus_tag="PSPTO1022" FT /colour=255 0 0 FT promoter complement(1116378..1116410) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT VR_#28 1155000..1220000 FT /colour=255 255 0 FT CDS complement(1161594..1162319) FT /pseudo FT /colour=178 58 238 FT tRNA complement(1162588..1162664) FT /gene="tRNA-Met-2" FT /product="tRNA-Met" FT /note="codon recognized: AUG" FT CDS complement(1190000..1190890) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_1084" FT /old_locus_tag="PSPTO1084" FT /product="integrase/recombinase XerD, putative" FT /note="similar to SP:P22885; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q888E2" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q888E2" FT /protein_id="AAO54613.1" FT /translation="MRFLEFFTANIRNPNTRRAYARATQEFLTWCQVVGVPSLTEVSPL FT HVATWIELQMQTLAAPSVKQRLAAIRHLFDWLVVGQVVPHNPAASVRGPSHTSRTGKTP FT VLEPLEARQLLDSIDICTPAGLRDRALIALMVFSFARIGAALAMKVEDVYIQNQRLWVR FT LKEKGGKQHVMPCQHSLEAYLHAYLVETGIDNDPKGPLFRTIGRGTEQLSVNALPQANA FT HAMVRRRALAAGIKTSIGNHTFRATGITAYLKNGGTLENAAAMANHASTRTTQLYDRRR FT DEISLDEVERIRLDR" FT /colour=178 58 238 FT CDS complement(1190000..1190890) FT /codon_start=1 FT /locus_tag="PSPTO1084" FT /orf_name="PSPTO_1084" FT /product="Integrase/recombinase XerD, putative " FT /function="DNA binding" FT /biological_process="DNA integration" FT /biological_process="DNA recombination" FT /protein_id="AAO54613.1" FT /db_xref="GO:0003677" FT /db_xref="GO:0006310" FT /db_xref="GO:0015074" FT /db_xref="HOGENOM:HBG445753" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR013762" FT /db_xref="TIGR:PSPTO1084" FT /db_xref="UniParc:UPI0000008695" FT /db_xref="UniProtKB/TrEMBL:Q888E2" FT /transl_table=11 FT /translation="MRFLEFFTANIRNPNTRRAYARATQEFLTWCQVVGVPSLTEVSPL FT HVATWIELQMQTLAAPSVKQRLAAIRHLFDWLVVGQVVPHNPAASVRGPSHTSRTGKTP FT VLEPLEARQLLDSIDICTPAGLRDRALIALMVFSFARIGAALAMKVEDVYIQNQRLWVR FT LKEKGGKQHVMPCQHSLEAYLHAYLVETGIDNDPKGPLFRTIGRGTEQLSVNALPQANA FT HAMVRRRALAAGIKTSIGNHTFRATGITAYLKNGGTLENAAAMANHASTRTTQLYDRRR FT DEISLDEVERIRLDR" FT /colour=178 58 238 FT gene complement(1190000..1190890) FT /locus_tag="PSPTO_1084" FT /old_locus_tag="PSPTO1084" FT /colour=178 58 238 FT gene complement(1190000..1190890) FT /locus_tag="PSPTO_1084" FT /old_locus_tag="PSPTO1084" FT /colour=178 58 238 FT CDS 1205057..1206079 FT /gene="PSPTO1095" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO54624.1" FT /db_xref="GI:28851547" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 1205057..1206079 FT /gene="PSPTO1095" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO54624.1" FT /db_xref="GI:28851547" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 1206076..1206885 FT /gene="PSPTO1096" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO54625.1" FT /db_xref="GI:28851548" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 1206076..1206885 FT /gene="PSPTO1096" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO54625.1" FT /db_xref="GI:28851548" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(1211249..1212802) FT /gene="PSPTO1098" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54627.1" FT /db_xref="GI:28851550" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(1211249..1212802) FT /gene="PSPTO1098" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54627.1" FT /db_xref="GI:28851550" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(1212820..1213179) FT /gene="PSPTO1099" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54628.1" FT /db_xref="GI:28851551" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(1212820..1213179) FT /gene="PSPTO1099" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54628.1" FT /db_xref="GI:28851551" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(1214486..1215673) FT /gene="PSPTO1100" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54629.1" FT /db_xref="GI:28851552" FT /translation="MLTDAHCRAAKAKDKLYRINDARGLYLEVKPNGVRAWRYRFKLC FT GKASWFALGDYPDLSLANAREKCDEARKLVRQGINPVQNRQLTKIKREMDASNTFETI FT AQEWLALKSWEPVTKSRRLGMLKRVVFPSIGKLPVRTITSAHVLDILNKTVKRGAPTV FT AAEAKRTMSGVFELAVATLRADTDPVWPVRKALPPNKTQHKAALTSGQVGNLLNAFDS FT HGGHFQTQMAFRLMWLTLTRANESVQARWDEFDLANGLWKIPKERMKARREHLLPLPR FT QAVSILTTMQPITGQSTYVFPNRDDRHKPMSDAAFRQALKKLGWATIYSPHGTRTTGS FT TRLNEMGYRSDAIEAQLAHAEPNSVRRAYNHAIYMVERAEMMQHWADKLDLWKKEASD FT AAI" FT /colour=178 58 238 FT MBL complement(1214486..1215673) FT /gene="PSPTO1100" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO54629.1" FT /db_xref="GI:28851552" FT /translation="MLTDAHCRAAKAKDKLYRINDARGLYLEVKPNGVRAWRYRFKLC FT GKASWFALGDYPDLSLANAREKCDEARKLVRQGINPVQNRQLTKIKREMDASNTFETI FT AQEWLALKSWEPVTKSRRLGMLKRVVFPSIGKLPVRTITSAHVLDILNKTVKRGAPTV FT AAEAKRTMSGVFELAVATLRADTDPVWPVRKALPPNKTQHKAALTSGQVGNLLNAFDS FT HGGHFQTQMAFRLMWLTLTRANESVQARWDEFDLANGLWKIPKERMKARREHLLPLPR FT QAVSILTTMQPITGQSTYVFPNRDDRHKPMSDAAFRQALKKLGWATIYSPHGTRTTGS FT TRLNEMGYRSDAIEAQLAHAEPNSVRRAYNHAIYMVERAEMMQHWADKLDLWKKEASD FT AAI" FT tRNA complement(1219496..1219570) FT /gene="tRNA-Gln-1" FT /product="tRNA-Gln" FT /note="codon recognized: CAA" FT VR_#20 1277500..1285000 FT /colour=255 255 0 FT CDS 1279469..1280446 FT /gene="PSPTO1166" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54693.1" FT /db_xref="GI:28851617" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 1279469..1280446 FT /gene="PSPTO1166" FT /colour=178 58 238 FT CDS complement(1294195..1294536) FT /gene="hopJ1" FT /locus_tag="PSPTO1179" FT /note="previously known as HopPmaJ (PMID 11872842; Guttman FT et al, 2002); similar to GP:19071499; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopJ1" FT /protein_id="AAO54706.1" FT /db_xref="GI:28851630" FT /translation="MTDINSLRTRLRSGEHAFADTLAFIADGYDYQPQPFRNGDVDNA FT AGQNEGSCKTLGLALLEGLSDEEALLAFGEHYRSVQATPEGSDHGNIRALIKHGLAGV FT TFEGEPLKRKV" FT /colour=255 0 0 FT gene complement(1294195..1294536) FT /gene="hopJ1" FT /locus_tag="PSPTO1179" FT /colour=255 0 0 FT CDS 1299927..1300904 FT /gene="PSPTO1188" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54715.1" FT /db_xref="GI:28851639" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 1299927..1300904 FT /gene="PSPTO1188" FT /colour=178 58 238 FT CDS complement(1301655..1303208) FT /gene="PSPTO1189" FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54716.1" FT /db_xref="GI:28851640" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(1301655..1303208) FT /gene="PSPTO1189" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54716.1" FT /db_xref="GI:28851640" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(1303226..1303585) FT /gene="PSPTO1190" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54717.1" FT /db_xref="GI:28851641" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(1303226..1303585) FT /gene="PSPTO1190" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54717.1" FT /db_xref="GI:28851641" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(1307737..1309857) FT /gene="nfrB" FT /note="similar to SP:P31599, GB:M11717, GB:M24743, FT SP:P08107, PID:188488, PID:188490, PID:188530, PID:32481, FT PID:32483, PID:386785, and PID:639910; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="bacteriophage N4 adsorption protein B" FT /protein_id="AAO54721.1" FT /db_xref="GI:28851645" FT /translation="MTSLYWPYWLAHYYSMLEVATIIVGLIILVSSIDDLFIDLWYWA FT RRLYRKFTAERRYRPLTAEQLIARDEQPLAIMVPAWLEYDVIAPMIENMVSTLDYQNY FT VVFVGTYINDQRTIDEVERMRRRYKQLHRVEVPHNGPTCKADCLNWVIQAIFLYEQTH FT AVQFAGTILHDSEDVLHPLELRLFNYLLPRKDMIQLPVVSLERNWYEWVAGTYMDEFA FT EWHGKDLVVRESMTDTVPSAGVGTCFSRRALMVLADENQNQPFNTESLTEDYDVGARL FT AKYGMQAIFVRFPVQFRVLRKSWFRKPYESTLEMPLCVREFFPDTFRTAFRQKARWTL FT GIGLQGWEQMGWTGSLANRYLLFRDRKGVVTSFVSIIAYLILVQLLALIVLRSSGLWN FT TSFPTPFETNGLIQYLLVANGVALLWRILHRCYFTTVLYGWQHGLLSIPRMVVGNFVN FT FMAAARAWRMFLVGKVLNRKLVWDKTMHDFPSTDLVAAAPRRLGSVLISWQAINDEKL FT QTALAEQQTRQVPLGRILLSHGWLDDETLAEAIAFQNDLPRVFDIAGKRSTSNPLADE FT FCLRWRVVPLQMNAMGRQEIAVASPLPEEGLQQITEQLGAEPVQLIARESDIVTQLRQ FT LQVVEGQPLPSATPLLGDLLIEQGLLDREVFRKAMLGYRPHVHGRIGDYLVDIGVLPR FT ETIEQAVARQHNHYHADDQTEQPL" FT /colour=178 58 238 FT MBL complement(1307737..1309857) FT /gene="nfrB" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to SP:P31599, GB:M11717, GB:M24743, FT SP:P08107, PID:188488, PID:188490, PID:188530, PID:32481, FT PID:32483, PID:386785, and PID:639910; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="bacteriophage N4 adsorption protein B" FT /protein_id="AAO54721.1" FT /db_xref="GI:28851645" FT /translation="MTSLYWPYWLAHYYSMLEVATIIVGLIILVSSIDDLFIDLWYWA FT RRLYRKFTAERRYRPLTAEQLIARDEQPLAIMVPAWLEYDVIAPMIENMVSTLDYQNY FT VVFVGTYINDQRTIDEVERMRRRYKQLHRVEVPHNGPTCKADCLNWVIQAIFLYEQTH FT AVQFAGTILHDSEDVLHPLELRLFNYLLPRKDMIQLPVVSLERNWYEWVAGTYMDEFA FT EWHGKDLVVRESMTDTVPSAGVGTCFSRRALMVLADENQNQPFNTESLTEDYDVGARL FT AKYGMQAIFVRFPVQFRVLRKSWFRKPYESTLEMPLCVREFFPDTFRTAFRQKARWTL FT GIGLQGWEQMGWTGSLANRYLLFRDRKGVVTSFVSIIAYLILVQLLALIVLRSSGLWN FT TSFPTPFETNGLIQYLLVANGVALLWRILHRCYFTTVLYGWQHGLLSIPRMVVGNFVN FT FMAAARAWRMFLVGKVLNRKLVWDKTMHDFPSTDLVAAAPRRLGSVLISWQAINDEKL FT QTALAEQQTRQVPLGRILLSHGWLDDETLAEAIAFQNDLPRVFDIAGKRSTSNPLADE FT FCLRWRVVPLQMNAMGRQEIAVASPLPEEGLQQITEQLGAEPVQLIARESDIVTQLRQ FT LQVVEGQPLPSATPLLGDLLIEQGLLDREVFRKAMLGYRPHVHGRIGDYLVDIGVLPR FT ETIEQAVARQHNHYHADDQTEQPL" FT VR_#30 1316033..1321301 FT /colour=255 255 0 FT misc_feature 1324055..1324192 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="2.6e-13" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=41.800000 FT VR_#31 1335000..1352500 FT /colour=255 255 0 FT CDS 1343596..1343955 FT /gene="PSPTO1226" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54752.1" FT /db_xref="GI:28851676" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 1343596..1343955 FT /gene="PSPTO1226" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO54752.1" FT /db_xref="GI:28851676" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 1343973..1345526 FT /gene="PSPTO1227" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54753.1" FT /db_xref="GI:28851677" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 1343973..1345526 FT /gene="PSPTO1227" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO54753.1" FT /db_xref="GI:28851677" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS 1346595..1347572 FT /gene="PSPTO1229" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54754.1" FT /db_xref="GI:28851678" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 1346595..1347572 FT /gene="PSPTO1229" FT /colour=178 58 238 FT CDS complement(1351082..1352533) FT /gene="algA" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgA" FT /protein_id="NP_791062.1" FT /db_xref="GI:28868443" FT /translation="MIPVILSGGSGSRLWPLSRKQFPKQFLALTGEHTLFQQTLQRLV FT FEGMQEPIVVCNKDHRFIVNEQLAALNLETQAILMEPFGRNTAPAVALTAMKLVNEGN FT DGLMLVLPADHVIEDQKALQRALALATVTAERGEMVLFGVPANKPETGYGYIKSTADA FT LLPEGVSRVSQFVEKPDEKRAKEFVEAGGYYWNSGMFLFRASRFLEELKKHDPDIYDT FT CLLTLERSVQDGDALEIDASTFACCPDNSIDYAVMEKTQRACVVPLSAGWSDVGCWSS FT LWEVNAKDAHGNVTKGDVVIQDSRNCMIHGNGKLVSVIGLDNIVVVETKDAMMIAHKD FT KVQGVKQMVATLNEQGRTETQNHLEVYRPWGSYDSVDMGGRFQVKRISVKPGACLSLQ FT MHHHRAEHWIVVSGTAQVTCDENVFLLTENQSTYIPIASVHRLRNPGKIPLEIIEVQS FT GSYLGEDDIERFEDIYGRSNALEAGVKTQTIAR" FT /colour=0 255 0 FT CW_VIR_gene complement(1351082..1352533) FT /gene="algA" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1232" FT CDS complement(1352670..1353338) FT /gene="algF" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgF" FT /protein_id="NP_791063.1" FT /db_xref="GI:28868444" FT /translation="MTSNNTAHRSATKRLFKTCALAAGLGLMSLPAFAGDSALYGPTA FT PKGSTFVRVYNASSAEISASVGNTNLNEVAPLGSTAFSFMPQGDYTAKLGSQSVPVKL FT ASDHYYTLVNNASGKPQLVEEPPFKNKQKSLVRVQNLSDKSLTLKTADGKTEVVNTVA FT AKGTGEREINPVKVSLALYDGDKKVTDVKPVALERGEAAVLYITGSGSSLSPVWVKPP FT VATR" FT /colour=0 255 0 FT CW_VIR_gene complement(1352670..1353338) FT /gene="algF" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1233" FT CDS complement(1353351..1354526) FT /gene="algJ" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgJ" FT /protein_id="NP_791064.1" FT /db_xref="GI:28868445" FT /translation="MTRSLRILYIAIFLGILLILGAWSLRSFSNFSTSAETTVLNGKW FT TKAAETHYDDEFPIKRLGTNLWAALDFKLFNEGRPGVVLGKDQWLYTDEEFDAVANGE FT QNEADNLALIQGVRDALEKQGSKLVLAIVPAKTRLYPEHIGDNKPASLHADLYQQFHA FT QVAKAGIFAPDLLAPLQAAKQQGQVFLRTDTHWTPMGAEVAAQQLGAAIAQKAPLEGE FT PEQFVTQAIETAPYKGDLTTFLPLDPLFSNLLPKPDELQKRSTDPVAGEAAGGDALFA FT DSDVAVGLVGTSYSANPNWNFVGALKQALRSDVVNYAEDGHGPILPMLKYLQTDAFKN FT TPPQVVIWEFPERYLPAHNDLGEFDPKWIAELKKSRDTQENVALNAKPSESPNRAQN" FT /colour=0 255 0 FT CW_VIR_gene complement(1353351..1354526) FT /gene="algJ" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1234" FT CDS complement(1354537..1356093) FT /gene="algI" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgI" FT /protein_id="NP_791065.1" FT /db_xref="GI:28868446" FT /translation="MVFSSNVFLFMFLPIFLGLYYLSGQRYRNLLLLIASYIFYAWWR FT VDFLALFIGVTVWNYWIGLKVGAAGVRTKPAQRWLLLGVIVDLCILGYFKYANFGVDS FT INAAMTSMGLEPFILTHVLLPIGISFYVFESISYIIDVYRGDTPATRNLIDFAAFVAI FT FPHLIAGPVLRFRDLADQFNNRTHTLDKFSEGATRFMQGFIKKVFIADTLAIVADHCF FT ALQNPTTGDAWLGALAYTAQLYFDFSGYSDMAIGLGLMMGFRFMENFKQPYISQSITE FT FWRRWHISLSTWLRDYLYITLGGNRGGKVATYRNLFLTMLLGGLWHGANVTYIIWGAW FT HGMWLAIEKAVGINTKPYSFNVIRWALTFLLVVIGWVIFRSENLHVAGRMYGAMFSFG FT DWQLSELNRASLTGLQVATLVVAYATLAFFGLRDFYQNREKDSGKSARADGPATEQPG FT TIKAVPGDAPGSLHLPGYTVGSEAQVQPAYWVADWPRYAMRALILLLFVASILKLSAQ FT SFSPFLYFQF" FT /colour=0 255 0 FT CW_VIR_gene complement(1354537..1356093) FT /gene="algI" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1235" FT CDS complement(1356280..1357416) FT /gene="algL" FT /codon_start=1 FT /transl_table=11 FT /product="alginate lyase" FT /protein_id="NP_791066.1" FT /db_xref="GI:28868447" FT /translation="MQTPKLIRPTLLSMAIVSSMAWATGASAALVPPKGYDAPIEKMK FT TGDHNFTCEAIPKPYTDKLVFRSKYEGSDKARATLNAVSEEAFRDATKDITTLERGVS FT KVVMQYMRDGRPEQLDCALNMMTTWAKADALESREFNHTGKSMRKWALGSMSSAYLRL FT KFSDSHPLANRQQDAQIIEAWFSKLADQVVSDWSNLPLEKINNHSYWAAWSVMSTAVV FT TNRKDLFDWAVKEFKVAANQVDKDGYLPNEMKRRQRALSYHNYALPPLAMIASFAQAN FT GVDLRPENNGALKRLGDRVLAGVKDPASFAEHNGEKQDMTDLKKDPKFAWLEPYCSLY FT TCSPDVLEDKHEKQPFKTFRLGGDLTKVYDPTHEKGDKGDNDGS" FT /colour=0 255 0 FT CW_VIR_gene complement(1356280..1357416) FT /gene="algL" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1236" FT CDS complement(1357425..1358864) FT /gene="algX" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgX" FT /protein_id="NP_791067.1" FT /db_xref="GI:28868448" FT /translation="MHAHLIKLLSLSSLTAALMAAAGVARADDAQAPTFKAEPCCSLC FT PAAHDAKNYTTRYQQNFTTLVQAQGDWLFRTQEDLRTEFDTTPGGYRRMKELHDAFKS FT KGVELVVVYQPTRGLVDRNKLFPAERDKFDYDKALKNYQAMLGRFSKMGYWVPDLSPL FT TNEQQAHDFYFRGDQHWTPYGAQRTAKIVAETVKKVPGYSSIPKREFESHISGRMGKT FT GTLHNMAGQLCGTSYAVQYMDQFTTEPKGEAGDGDLFGDAGNPEITLVGTSHSGKNYN FT FAGFLQEYMGADVLNVAFPGGGLEGSMLQYLGSEDFQKRPPKILIWEFSPLYRLDQET FT IYRQMMALLDNGCEGKPAVMSASTTLKPGNNEVLVNGKNGIKDIRNGSNQIDIRFDDT FT SVKTLQARLWYMNGRHEDLKIEKPETSDTDGRFAFELREDEDWADQQLLALEIQGPEA FT GTAPQKVAAKVCKRNVFPSAAKHTAQAGL" FT /colour=0 255 0 FT CW_VIR_gene complement(1357425..1358864) FT /gene="algX" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1237" FT CDS complement(1358879..1360489) FT /gene="algG" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgG" FT /protein_id="NP_791068.1" FT /db_xref="GI:28868449" FT /translation="MNSHASNGRSRNWPHALLESALLTSALLMASSVALANAPAVPEA FT PKALVKELHQAKTYTITSPPTGPLEMAKPVLPDLSGYTTEAALKKIARNKPGKITVAR FT MMEETGLKEFIGGDNKMAEWVVRQKGIPQAIMISDGYVNLQDLVKKVPKQFLSEVSPG FT VYVARLPILVKETGIFEIDSKTKELRLSQEKGSFIVSEGKMLITNTSVNAWSETRNGL FT AAYRTPDEFRPFVLTWGGSQTWIAKTKMASMGYNQSKSYGVSISQYTPNTAKVLKRGE FT PTGWIIDSEFADMWYGFYCYETRDFVVKGNTYRDNIVYGIDPHDRSHGLIIAENDVYG FT TKKKHGIIISREVDNSFIFRNKSHNNKLSGVVLDRNSVGNIVAYNEIYQNHTDGITLY FT ESGNNLLWGNRVIANRRHGIRVRNSVNIKLYENVAMANGLMGVYGHIKDLNDTDRDIE FT LDPFDAQVSLIMVGGELSSNGSGPLSIDSPLSVELYRVSMLMPTKEVGISLNGILGER FT QDEILDLLVRQKKAVLIDPVESQTELRE" FT /colour=0 255 0 FT CW_VIR_gene complement(1358879..1360489) FT /gene="algG" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1238" FT CDS complement(1360516..1361997) FT /gene="algE" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgE" FT /protein_id="NP_791069.1" FT /db_xref="GI:28868450" FT /translation="MKLNPLMAAGMGLGFTLFWACPTLAALTEQQNFGIEIKATAQAE FT DDRDLGTRSGGDVNGVGLDLRPWVYGERGDWSGYAMGQVVTATDTIQTDPLEQSNSDG FT SGTQTSRGTASEREVEKSYAALREFWIGYSGFTPYPGEILKVGRQRLRNDDGQWHDTN FT IEAINWNFDTTLLRAELGAAQRFSEYRTDLTELAPDDEDRKHLFGSASYQWTPGHWAG FT VRAHYSHDDGKLKSQGEQLDDLDKTSNGNLTWLGLQADSDAYNYRNTTPLNYWGSLTW FT LNGTRDEIGVTSAANDQFFAGEKNSRDMNGWATDLGLRLRLDPQWQVGAAYSRASKDY FT IQNGLESNRSNWTGTRSRIHRFGEAFQGEMANVETGSLFASWQMNEEYDASLIYHKFR FT RVDGNTGIGGSGINAVRENGDSNTFSSLPLEDGRKDLGQEMDLVVTKYFKQGLLPASL FT SQSFDEPSALVRLRAGVFKPGDAYHNGVDEYMHRAVVDVIWRF" FT /colour=0 255 0 FT CW_VIR_gene complement(1360516..1361997) FT /gene="algE" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1239" FT CDS complement(1361994..1363406) FT /gene="algK" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein AlgK" FT /protein_id="NP_791070.1" FT /db_xref="GI:28868451" FT /translation="MNSPLRRLSTPTLLSLAVALGLSGCAGLPDQRLANEALKNGDTA FT LAEQNYRQLADLGYSDAQVGLADIQVNTRDPALLKQAEATYRAAAQTSPRAQSRLGRL FT LAVKPDATEAEHREAEELLKKAFANGESGTLIPLAMLYLQYPHTFPEVNAQQKISQWR FT AAGYPEAGLAQVLLYRTQGTYAEHLDEVESICKQALSATDICYVELATVYQTRGQTEQ FT QAALIAQLRSAHAAGRVNAQRVDSVARVLGDSTIGTPDEKTAQQLLEEVAPGYPISWV FT TLAKLLYDFPELGDVNKMMEYLNNGRAADQPRAELLLGRLYYEGKWVPADAVKAEEHL FT KKATATEISAHYYLGQIYRRGYLGQVYPQKAVDELLTAARGGQNSADFALAQLFSQGK FT GTLPDPVNAWVFAQLSLASETPQATELAQAMSTQLPPEKLATAKDLLAREQKVRGASA FT TQNAMAMQALQEEKDGEEAL" FT /colour=0 255 0 FT CW_VIR_gene complement(1361994..1363406) FT /gene="algK" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1240" FT CDS complement(1363409..1364581) FT /gene="PSPTO1241" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein Alg44" FT /protein_id="NP_791071.1" FT /db_xref="GI:28868452" FT /translation="MNTAVNANVVHESEAQRQHARIKIPAKLRLLNDKPNAPLVRIED FT LSAGGLSFVAPAGLAYTTGEVIKGRLQFLIDNLGLAMDVEMQVRSVDTASGRVGCQFQ FT NLEAQDIATLRHLITSHLSGEIVSLGEVLATLQRDNFTKARKVKGSDSGMSALGRLRA FT VTFSLGIFIVGLAAFGFIFKTVYGLYFVSHASAGLVSIPSMDVTMPREGTLQSLVAQN FT GEATKGAPLATFNTSMLEMLKGSLTGEDLQPAKIEELYGKQMSGTMTSPCDCVVARQL FT VADGQFASKGQVIFQLVPRNAPATVEARFTYRQFNDVKPGTRVSFQIAGEDKLRTGQI FT VSSTNLSDTDLSTDIRVQIKPDESLSSSLAGRPVEVVSDRGPSVNWLLDKAMAAGL" FT /colour=0 255 0 FT CW_VIR_gene complement(1363409..1364581) FT /gene="PSPTO1241" FT /colour=0 255 0 FT CDS complement(1364622..1366103) FT /gene="PSPTO1242" FT /codon_start=1 FT /transl_table=11 FT /product="alginate biosynthesis protein Alg8" FT /protein_id="NP_791072.1" FT /db_xref="GI:28868453" FT /translation="MQRLKHGLLQAAGWLFYLSLLMGLAAALPTSIFDSQSKNFIFLI FT GAVGIWRYSMGITHFVRGMIFLYIVYPHLRRKVRKLGSAADPSHVFLMVTSFRIDALT FT TAQVYSSVIREAIECGLPTTVVCSLVEMSDELLVKSMWAKANPPDRVKLDFVRIPGTG FT KRDGLAYGFRAISRHMPDDRAVVAVIDGDTVLNEGVVAKTVPWFQLFDNVGGLTTNEF FT CEVRGGYIMSEWHKLRFAQRHINMCSMALSKRVLTMTGRMSVFRAKVVTDPEFIADVE FT SDSLNHWRLGTFRFLTGDDKSSWFSLMRLGYDTFYVPDAAINTVEHPPEKSFLKASRK FT LMYRWYGNNLRQNSRALGLGVRRLGIFTSIVLFDQRVSMWTSILGLTVAIIASFKYGG FT AFLLMYLLWIGMTRLILTLLLSLSGHRIGPAYPMILYYNQIVGALMKIYVFFRLDRQS FT WTRQDTKLSRDMASFQGWFNTWSSRTMTFSAGTIFVAVLLTMV" FT /colour=0 255 0 FT CW_VIR_gene complement(1364622..1366103) FT /gene="PSPTO1242" FT /colour=0 255 0 FT CDS complement(1366206..1367522) FT /gene="algD" FT /codon_start=1 FT /transl_table=11 FT /product="GDP-mannose 6-dehydrogenase AlgD" FT /protein_id="NP_791073.1" FT /db_xref="GI:28868454" FT /translation="MRISIFGLGYVGAVCAGCLSARGHDVVGVDISSTKIDLINNGKS FT PIVEPGLEELLQKGLATGKLRGTTDFAEAIRATDLSMICVGTPSKKNGDLELDYIESV FT CREIGYVLRDKNTRHTIVVRSTVLPGTVANVVIPILEDCSGKKAGVDFGVAVNPEFLR FT ESTAIKDYDLPPMTVIGEFDKASGDVLQSLYEELDAPIIRKDIAVAEMIKYTCNVWHA FT TKVTFANEIGNIAKAVGVDGREVMDVVCQDKALNLSQYYMRPGFAFGGSCLPKDVRAL FT TYRAGSLDVDAPLLNSLMRSNTSQVQNAFDMVASYDTRKVALLGLSFKAGTDDLRESP FT LVELAEMLIGKGFDLSIFDSNVEYARVHGANKDYIESKIPHVSSLLNSDFDQVINDSD FT VIILGNRDERFRSLANKTPEGKRVIDLVGFMTNATTEDGRAEGICW" FT /colour=0 255 0 FT CW_VIR_gene complement(1366206..1367522) FT /gene="algD" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1243" FT CDS 1441968..1442945 FT /gene="PSPTO1310" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO54834.1" FT /db_xref="GI:28851758" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 1441968..1442945 FT /gene="PSPTO1310" FT /colour=178 58 238 FT VR_#33 1441968..1447500 FT /colour=255 255 0 FT CDS 1444523..1445275 FT /gene="PSPTO1313" FT /note="similar to GP:39717, and SP:P33409; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="pili assembly chaperone" FT /protein_id="NP_791142.1" FT /db_xref="GI:28868523" FT /translation="MYSDFFRAAVGVAMVSWCASVQAGIVLNTTRVIYQGNDKEVSLG FT VHNSGGGEILLQSWLEAPALATGNDPATQRLPFIVTPSLTRMAGGGKQLLRIIHSGTD FT MSTDRESVLWLNVQEIPQTAAQNTLQIAIRQRIKVFFRPDGMPGDPLQAPEQLNWKTG FT NNDSLQVENPGPYHVSMLKISVRQDDVELASIESQMLAPQQSLHIPLLRKKGGAPLVV FT SFVSINDYGGQVPYRATLANHESGYASKVMPR" FT /colour=0 255 0 FT CW_VIR_gene 1444523..1445275 FT /gene="PSPTO1313" FT /colour=0 255 0 FT VR_#34 1469164..1489901 FT /colour=255 255 0 FT VR_#35 1502395..1507474 FT /colour=255 255 0 FT VR_#35 1502500..1507500 FT /colour=255 255 0 FT promoter 1504886..1504917 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1504948..1505427 FT /old_locus_tag="PSPTO1369" FT /codon_start=1 FT /locus_tag="PSPTO1369" FT /orf_name="PSPTO_1369" FT /product="Hypothetical protein" FT /biological_process="pathogenesis" FT /biological_process="regulation of protein secretion" FT /cellular_component="cytoplasm" FT /protein_id="AAO54891.1" FT /db_xref="EMBL:AAF71507.1" FT /db_xref="GO:0005737" FT /db_xref="GO:0009405" FT /db_xref="GO:0050708" FT /db_xref="InterPro:IPR010261" FT /db_xref="TIGR:PSPTO1369" FT /db_xref="UniParc:UPI000000879E" FT /db_xref="UniProtKB/TrEMBL:Q9JP31" FT /transl_table=11 FT /translation="MRPVEAKDRLYQWLRNRGIDAQEGQRHNVRTANGSECLLWLPEQD FT TSLFIFTQIERLTMPQDNVILILAMALNLEPARTGGAALGYNPDSRELLLRSVHSMADL FT DETGLDHLMTRISTLAVSLQRYLEDYRRQEQAGKTAQKEPRFLPAVHLTPRTFMT" FT /color=200 150 100 FT promoter 1505219..1505251 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT CDS 1505441..1506493 FT /gene="hopN1" FT /locus_tag="PSPTO1370" FT /note="Also known as CEL ORF7 (PMID 10781092; Alfano et FT al, 2000) and HolPtoT (PMID 11872842; Guttman et al, FT 2002), and HopPtoN (PMID 15469508; Lopez-Solanilla, et al, FT 2004); identified by match to TIGR protein family HMM FT TIGR01586" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopN1" FT /protein_id="AAO54892.1" FT /db_xref="GI:28851816" FT /translation="MYIQQSGAQSGVAAKTQHDKPSSLSGLAPGSSDAFARFHPEKAG FT AFVPLEGHEEVFFDARSSFSSVDAADLPSPEQVQPQLHSLRTLLPDLMVSIASLRDGA FT TQYIKTRIKAMADNSIGATANIEAKRKIAQEHGCQLVHPFHQSKFLFEKTIDDRAFAA FT DYGRAGGDGHACLGLSVNWCQSRAKGQSDEAFFHKLEDYQGDALLPRVMGFQHIEQQA FT YSNKLQNAAPMLLDTLPKLGMTLGKGLGRAQHAHYAVALENLDRDLKAVLQPGKDQML FT LFLSDSHAMALHQDSQGCLHFFDPLFGVVQADSFSNMSHFLADVFKRDVGTHWRGTEQ FT RLQLSEMVPRADFHLR" FT /colour=255 0 0 FT gene 1505441..1506493 FT /gene="hopN1" FT /locus_tag="PSPTO1370" FT /colour=255 0 0 FT promoter 1507652..1507684 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1507846..1509306 FT /gene="hopAA1-1" FT /locus_tag="PSPTO1372" FT /note="previously known as HopPtoA1 (PMID 12437299; Badel FT et al,2002) and CEL ORF5 (PMID 10781092; Alfano et al, FT 2000); identified by match to PFAM protein family HMM FT PF02987" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAA1-1" FT /protein_id="AAO54894.1" FT /db_xref="GI:28851818" FT /translation="MHINRRVQQPPVTATDSFRTASDASLASSSVRSVSSDQQREINA FT IADYLTDHVFAAHKLPPADSADGQAAVDVHNAQITALIETRASRLHFEGETPATIADT FT FAKAEKLDRLATTTSGALRATPFAMASLLQYMQPAINKGDWLPAPLKPLTPLISGALS FT GAMDQVGTKMMDRATGDLHYLSASPDRLHDAMAASVKRHSPSLARQVLDTGVAVQTYS FT ARNAVRTVLAPALASRPAVQGAVDLGVSMAGGLAANAGFGNRLLSVQSRDHQRGGALV FT LGLKDKEPKAQLSEENDWLEAYKAIKSASYSGAALNAGKRMAGLPLDMATDAMGAVRS FT LVSASSLTQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNLAGSAAVFAGWT FT TAALTTDPAVKKAESFIQDTVKSTASSTTGYVADQTVKLAKTVKDMGGEAITHTGASL FT RNTVNNLRQRPAREADIEEGGTAASPSEIPFRPMRS" FT /colour=255 0 0 FT gene 1507846..1509306 FT /gene="hopAA1-1" FT /locus_tag="PSPTO1372" FT /colour=255 0 0 FT CDS complement(1509390..1510664) FT /gene="hrpW1" FT /locus_tag="PSPTO1373" FT /note="similar to GP:3694999, and GP:8037796; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III helper protein HrpW1" FT /protein_id="AAO54895.1" FT /db_xref="GI:28851819" FT /translation="MSIGITPRPQQTTTPLDFSALSGKSPQPNTFGEQNTQQAIDPSA FT LLFGSDTQKDVNFGTPDSTVQNPQDASKPNDSQSNIAKLISALIMSLLQMLTNSNKKQ FT DTNQEQPDSQAPFQNNGGLGTPSADSGGGGTPDATGGGGGDTPSATGGGGGDTPTATG FT GGGSGGGGTPTATGGGSGGTPTATGGGEGGVTPQITPQLANPNRTSGTGSVSDTAGST FT EQAGKINVVKDTIKVGAGEVFDGHGATFTADKSMGNGDQGENQKPMFELAEGATLKNV FT NLGENEVDGIHVKAKNAQEVTIDNVHAQNVGEDLITVKGEGGAAVTNLNIKNSSAKGA FT DDKVVQLNANTHLKIDNFKADDFGTMVRTNGGKQFDDMSIELNGIEANHGKFALVKSD FT SDDLKLATGNIAMTDVKHAYDKTQASTQHTEL" FT /colour=200 150 100 FT gene complement(1509390..1510664) FT /gene="hrpW1" FT /locus_tag="PSPTO1373" FT /colour=200 150 100 FT promoter complement(1510785..1510816) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter 1510881..1510913 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1510970..1511464 FT /gene="shcM" FT /locus_tag="PSPTO_1374" FT /codon_start=1 FT /transl_table=11 FT /product="conserved effector locus protein" FT /protein_id="AAO54896.1" FT /db_xref="GI:28851820" FT /translation="MTNNDQYHTLINEICALSLISTPERFYESANFKISEVDFTLQFQ FT DRDEGRAVLIYGDMGALPARGRESALLALMDINFHMFAGAHSPAFSFNAQTGRVLLMG FT SVALERASAEGVLLLMKSFSDLAKEWREHGFMGQATTAGSSTDQPVAPAAKRESLSAP FT GRFQ" FT /colour=200 150 100 FT gene 1510970..1511464 FT /gene="shcM" FT /locus_tag="PSPTO_1374" FT /old_locus_tag="PSPTO1374" FT /colour=200 150 100 FT CDS 1511461..1513599 FT /gene="hopM1" FT /locus_tag="PSPTO1375" FT /note="previously known as CEL ORF3 (PMID 10781092; Alfano FT et al, 2000) and HolPtoX (PMID 11872842; Guttman et al, FT 2002) and HopPtoM (PMID 12940984; Badel et al, 2003); FT similar to GP:8037794; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopM1" FT /protein_id="AAO54897.1" FT /db_xref="GI:28851821" FT /translation="MISSRIGGAGGVELSRVNQQHDTVPAQTAHPNAVTAGMNPPLTP FT DQSGSHATESSSAGAARLNVAARHTQLLQAFKAEHGTAPVSGAPMISSRAALLIGSLL FT QAEPLPFEVMAEKLSPERYQLKQFQGSDLQQRLEKFAQPGQIPDKAEVGQLIKGFAQS FT VADQLEHFQLMHDASPATVGQHAKADKATLAVSQTALGEYAGRASKAIGEGLSNSIAS FT LDEHISALDLTLQDAEQGNKESLHADRQALVDAKTTLVGLHADFVKSPEAKRLASVAA FT HTQLDNVVSDLVTARNTVGGWKGAGPIVAAAVPQFLSSMTHLGYVRLSTSDKLRDTIP FT ETSSDANMLKASIIGMVAGIAHETVNSVVKPMFQAALQKTGLNERLNMVPMKAVDTNT FT VIPDPFELKSEHGELVKKTPEEVAQDKAFVKSERALLNQKKVQGSSTHPVGELMAYSA FT FGGSQAVRQMLNDVHQINGQTLSARALASGFGGAVSASSQTLLQLKSNYVDPQGRKIP FT VFTPDRAESDLKKDLLKGMDLREPSVRTTFYSKALSGIQSSALTSALPPVTAQAEGAS FT GTLSAGAILRNMALAATGSVSYLSTLYTNQSVTAEAKALKAAGMGGATPMLDRTETAL FT NNIRHPNRESLPHTFQKSTLSGIPRVAENAYHMGRGALQLPTQMAVDTVRVVDEGVLN FT AVASAREALKQPTKDDDALRALEEGLLDPR" FT /colour=255 0 0 FT gene 1511461..1513599 FT /gene="hopM1" FT /locus_tag="PSPTO1375" FT /colour=255 0 0 FT CDS 1513672..1514067 FT /gene="avrF" FT /locus_tag="PSPTO1376" FT /note="similar to GP:2978504, and GP:2978504; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="avirulence protein AvrF" FT /protein_id="AAO54898.1" FT /db_xref="GI:28851822" FT /translation="MTMKTSQPDFARFINSLGAQLGTSLTLQNGVCALYDGQNNEAAI FT IELPEHSEMVIFHCRIGRCPERAPDLLRLLSLNFDVARLHGCWFAVDQGDVRLCAQRE FT LASLDEPAFCDVTRGFISQAREARAFLQA" FT /colour=200 150 100 FT gene 1513672..1514067 FT /gene="avrF" FT /locus_tag="PSPTO1376" FT /colour=200 150 100 FT CDS complement(1514116..1519503) FT /gene="avrE1" FT /locus_tag="PSPTO1377" FT /note="similar to GB:K02096, GB:X66038, GB:X66039, FT GB:X66037, GB:X93626, SP:P01600, SP:P01602, SP:P01606, FT SP:P04431, PID:186006, PID:33150, PID:33307, PID:33311, FT PID:33313, PID:470592, PID:470594, PID:470596, PID:470600, FT PID:470602, PID:470604, PID:470606, PID:470608, FT PID:470610, PID:470612, PID:506423, PID:567136, FT PID:567138, PID:567154, PID:567158, PID:567168, FT PID:567172, PID:587326, PID:587328, PID:619603, FT PID:619613, PID:619614, PID:619624, PID:663000, FT PID:663001, PID:722458, PID:722540, PID:722552, FT PID:732746, PID:758085, PID:758589, PID:758599, FT PID:790811, PID:791024, PID:791036, PID:860994, FT PID:861002, and PID:940528; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector protein AvrE1" FT /protein_id="AAO54899.1" FT /db_xref="GI:28851823" FT /translation="MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLS FT SVGKRALKSVGKLFQKSKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSS FT PQNTHSAPKSILRNHPNQASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLD FT SDNPMTDEEAVANATRQFRSPDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIP FT PREPMLWRSNGGRFELKDEKLVRNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILA FT TPKQTYLAHQSKDGVHGHQLLQANGHLLHLAQDDSSLAVIRSSNEALLIEGKKPPAVK FT MEREDGNIHIDTASGRKTQELPGKAHIAHITNVLLSHDGERMRVHEDRLYQFDPISTR FT WKIPEGLEDTAFNSLSTGGNGSVYAKSDDAVVDLSSPFMPHVEVEDLQSFSVAPDNRA FT ALLSGKTTQAILLTDMSPVIGGLTPKKTKGLELDGGKAQAAAVGLSGDKLFIADTQGR FT LYSADRSAFEGDDPKLKLMPEQANFQLEGVPLGGHNRVTGFINGDDGGVHALIKNRQG FT ETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTMPPPPTAADRLNLDRAGLVGLSEGR FT IQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGGKLHALKIAAEHPNMAFDRNTAL FT AQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALDDQNKLTAHSKDHKPVTLDIP FT GLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLGDQLRARWTPVALPGGQPV FT KALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEENGLNDVHSRITGSNKTW FT RIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAETPRWMKNVGDHIQHR FT YQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALEAKLGPQGATLVK FT ELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSVRMQFGKKLAD FT LGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQKADIPLGQ FT RRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLRDVTYGE FT NPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAELAGKF FT KSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAERCE FT GGVTLYLISEGAGNVSGGFGAGKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVT FT ATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTA FT GGTADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKT FT ELKEGGKNRPRFLNNVTAGGQLRAQIGGSHTAPTGTPASAPGPTPASQTAANNLGGAL FT NFSVENRTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARY FT TGKKPDEVIQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDN FT ARFETSKTNLSGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGS FT IGTLARVRLEPKDSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAE FT NFTSPTPLVSYNSGANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAG FT DLKKEGFELKS" FT /colour=255 0 0 FT CDS complement(1514116..1519503) FT /gene="avrE1" FT /locus_tag="PSPTO1377" FT /note="similar to GB:K02096, GB:X66038, GB:X66039, FT GB:X66037, GB:X93626, SP:P01600, SP:P01602, SP:P01606, FT SP:P04431, PID:186006, PID:33150, PID:33307, PID:33311, FT PID:33313, PID:470592, PID:470594, PID:470596, PID:470600, FT PID:470602, PID:470604, PID:470606, PID:470608, FT PID:470610, PID:470612, PID:506423, PID:567136, FT PID:567138, PID:567154, PID:567158, PID:567168, FT PID:567172, PID:587326, PID:587328, PID:619603, FT PID:619613, PID:619614, PID:619624, PID:663000, FT PID:663001, PID:722458, PID:722540, PID:722552, FT PID:732746, PID:758085, PID:758589, PID:758599, FT PID:790811, PID:791024, PID:791036, PID:860994, FT PID:861002, and PID:940528; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector protein AvrE1" FT /protein_id="AAO54899.1" FT /db_xref="GI:28851823" FT /translation="MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLS FT SVGKRALKSVGKLFQKSKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSS FT PQNTHSAPKSILRNHPNQASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLD FT SDNPMTDEEAVANATRQFRSPDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIP FT PREPMLWRSNGGRFELKDEKLVRNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILA FT TPKQTYLAHQSKDGVHGHQLLQANGHLLHLAQDDSSLAVIRSSNEALLIEGKKPPAVK FT MEREDGNIHIDTASGRKTQELPGKAHIAHITNVLLSHDGERMRVHEDRLYQFDPISTR FT WKIPEGLEDTAFNSLSTGGNGSVYAKSDDAVVDLSSPFMPHVEVEDLQSFSVAPDNRA FT ALLSGKTTQAILLTDMSPVIGGLTPKKTKGLELDGGKAQAAAVGLSGDKLFIADTQGR FT LYSADRSAFEGDDPKLKLMPEQANFQLEGVPLGGHNRVTGFINGDDGGVHALIKNRQG FT ETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTMPPPPTAADRLNLDRAGLVGLSEGR FT IQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGGKLHALKIAAEHPNMAFDRNTAL FT AQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALDDQNKLTAHSKDHKPVTLDIP FT GLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLGDQLRARWTPVALPGGQPV FT KALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEENGLNDVHSRITGSNKTW FT RIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAETPRWMKNVGDHIQHR FT YQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALEAKLGPQGATLVK FT ELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSVRMQFGKKLAD FT LGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQKADIPLGQ FT RRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLRDVTYGE FT NPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAELAGKF FT KSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAERCE FT GGVTLYLISEGAGNVSGGFGAGKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVT FT ATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTA FT GGTADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKT FT ELKEGGKNRPRFLNNVTAGGQLRAQIGGSHTAPTGTPASAPGPTPASQTAANNLGGAL FT NFSVENRTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARY FT TGKKPDEVIQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDN FT ARFETSKTNLSGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGS FT IGTLARVRLEPKDSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAE FT NFTSPTPLVSYNSGANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAG FT DLKKEGFELKS" FT /colour=255 0 0 FT CDS complement(1514116..1519503) FT /gene="avrE1" FT /locus_tag="PSPTO1377" FT /note="similar to GB:K02096, GB:X66038, GB:X66039, FT GB:X66037, GB:X93626, SP:P01600, SP:P01602, SP:P01606, FT SP:P04431, PID:186006, PID:33150, PID:33307, PID:33311, FT PID:33313, PID:470592, PID:470594, PID:470596, PID:470600, FT PID:470602, PID:470604, PID:470606, PID:470608, FT PID:470610, PID:470612, PID:506423, PID:567136, FT PID:567138, PID:567154, PID:567158, PID:567168, FT PID:567172, PID:587326, PID:587328, PID:619603, FT PID:619613, PID:619614, PID:619624, PID:663000, FT PID:663001, PID:722458, PID:722540, PID:722552, FT PID:732746, PID:758085, PID:758589, PID:758599, FT PID:790811, PID:791024, PID:791036, PID:860994, FT PID:861002, and PID:940528; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector protein AvrE1" FT /protein_id="AAO54899.1" FT /db_xref="GI:28851823" FT /translation="MQSPSIHRNTGSIIQPTVTPDARAATDLQERAEQPRQRSSHSLS FT SVGKRALKSVGKLFQKSKAPQQKAATPPTAKNVKTPPPASNVATPRNKARESGFSNSS FT PQNTHSAPKSILRNHPNQASSSGAQTHEIHPEAAPRKNLRVRFDLPQDRLERSPSYLD FT SDNPMTDEEAVANATRQFRSPDSHLQGSDGTRISMLATDPDQPSSSGSKIGDSDGPIP FT PREPMLWRSNGGRFELKDEKLVRNSEPQGSIQLDAKGKPDFSTFNTPGLAPLLDSILA FT TPKQTYLAHQSKDGVHGHQLLQANGHLLHLAQDDSSLAVIRSSNEALLIEGKKPPAVK FT MEREDGNIHIDTASGRKTQELPGKAHIAHITNVLLSHDGERMRVHEDRLYQFDPISTR FT WKIPEGLEDTAFNSLSTGGNGSVYAKSDDAVVDLSSPFMPHVEVEDLQSFSVAPDNRA FT ALLSGKTTQAILLTDMSPVIGGLTPKKTKGLELDGGKAQAAAVGLSGDKLFIADTQGR FT LYSADRSAFEGDDPKLKLMPEQANFQLEGVPLGGHNRVTGFINGDDGGVHALIKNRQG FT ETHSHALDEQSSKLQSGWNLTNALVLNNNRGLTMPPPPTAADRLNLDRAGLVGLSEGR FT IQRWDATPECWKDAGIKDIDRLQRGADSNAYVLKGGKLHALKIAAEHPNMAFDRNTAL FT AQTARSTKVEMGKEIEGLDDRVIKAFAMVSNKRFVALDDQNKLTAHSKDHKPVTLDIP FT GLEGDIKSLSLDEKHNLHALTSTGGLYCLPKEAWQSTKLGDQLRARWTPVALPGGQPV FT KALFTNDDNVLSAQIEDAEGKGLMQLKAGQWQRFEQRPVEENGLNDVHSRITGSNKTW FT RIPKTGLTLRMDVNTFGRSGVEKSKKASTSEFIRANIYKNTAETPRWMKNVGDHIQHR FT YQGRLGLKEVYETESMLFKQLELIHESGGRPPARGQDLKARITALEAKLGPQGATLVK FT ELETLRDELENHSYTALMSIGQSYGKAKNLKQQDGILNQHGELAKPSVRMQFGKKLAD FT LGTKLNFKSSGHDLVKELQDALTQVAPSAENPTKKLLGTLKHQGLKLSHQKADIPLGQ FT RRDASEDHGLSKARLALDLVTLKSLGALLDQVEQLPPQSDIEPLQKKLATLRDVTYGE FT NPVKVVTDMGFTDNKALESGYESVKTFLKSFKKADHAVSVNMRAATGSKDQAELAGKF FT KSMLKQLEHGDDEVGLQRSYGVNLTTPFIILADKATGLWPTAGATGNRNYILNAERCE FT GGVTLYLISEGAGNVSGGFGAGKDYWPGFFDANNPARSVDVGNNRTLTPNFRLGVDVT FT ATVAASQRAGVVFNVPDEDIDAFVDDLFEGQLNPLQVLKKAVDHESYEARRFNFDLTA FT GGTADIRAGINLTEDRDPNADPNSDSFSAVVRGGFAANITVNLMTYTDYSLTQKNDKT FT ELKEGGKNRPRFLNNVTAGGQLRAQIGGSHTAPTGTPASAPGPTPASQTAANNLGGAL FT NFSVENRTVKRIKFRYNVAKPITTEGLSKLSKGLGEAFLDNTTKAKLAELADPLNARY FT TGKKPDEVIQAQLDGLEELFADIPPPKDNDKQYKALRDLKRAAVEHRASANKHSVMDN FT ARFETSKTNLSGLSSESILTKIMSSVRDASAPGNATRVAEFMRQDPKLRAMLKEMEGS FT IGTLARVRLEPKDSLVDKIDEGSLNGTMTQSDLSSMLEDRNEMRIKRLVVFHTATQAE FT NFTSPTPLVSYNSGANVSVTKTLGRINFVYGADQDKPIGYTFDGELSRPSASLKEAAG FT DLKKEGFELKS" FT /colour=200 150 100 FT gene complement(1514116..1519503) FT /gene="avrE1" FT /locus_tag="PSPTO1377" FT /colour=255 0 0 FT VR_#36 1517500..1527500 FT /colour=255 255 0 FT promoter complement(1519570..1519601) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter 1519666..1519697 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1522289..1523233 FT /gene="hrpR" FT /locus_tag="PSPTO1379" FT /note="similar to GB:X74863, SP:P52954, PID:1617116, and FT PID:510998; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III transcriptional regulator HrpR" FT /protein_id="AAO54901.1" FT /db_xref="GI:28851825" FT /translation="MSTGIDKDVRECWGVTALSAGHQIAMNSAFLDMDLLLCGETGTG FT KDTLANRIHELSSRSGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEASS FT GGTLYLDEIDSMPLSLQAKLLRVLESRGIERLGSTEFIPVDLRIIASAQRPLDELVEQ FT GLFRRDLFFRLNVLTLHLPALRKRREQILPLFDQFTQGIAAEFGRPAPALDSGRVQLL FT LSHDWPGNIRELKSAAKRFVLGFPLLGADPVEALDPATGLRTQMRIIEKMLIQDALKR FT HRHNFDAVLQELELPRRTLYHRMKELGVAAPIAATAGV" FT /colour=200 150 100 FT gene 1522289..1523233 FT /gene="hrpR" FT /locus_tag="PSPTO1379" FT /colour=200 150 100 FT CDS 1523279..1524187 FT /gene="hrpS" FT /locus_tag="PSPTO1380" FT /note="similar to GP:639829, and GP:639829; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III transcriptional regulator HrpS" FT /protein_id="AAO54902.1" FT /db_xref="GI:28851826" FT /translation="MSLDERFEDDLDEERVPNLGIVAESISQLGIDVLLSGETGTGKD FT TIARRIHEMSGRKGRLVAMNCAAIPESLAESELFGVVSGAYTGADRSRVGYVEAAQGG FT TLYLDEIDSMPLSLQAKLLRVLETRALERLGSTSTIKLDICVIASAQCSLDDAVERGQ FT FRRDLYFRLNVLTLKLPPLRNQSDRIVPLFTRFTAAAARELGVPVPDVCPLLHKVLLG FT HDWPGNIRELKAAAKRHVLGFPLLGAEPQGEEHLACGLKSQLRVIEKALIQESLKRHD FT NCVDSVSLELDVPRRTLYRRIKELQI" FT /colour=200 150 100 FT gene 1523279..1524187 FT /gene="hrpS" FT /locus_tag="PSPTO1380" FT /colour=200 150 100 FT promoter 1524204..1524236 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1524281..1524622 FT /gene="hrpA1" FT /locus_tag="PSPTO1381" FT /note="similar to GP:790907; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III helper protein HrpA1" FT /protein_id="AAO54903.1" FT /db_xref="GI:28851827" FT /translation="MVAFAGLTSKLTNLGNSAVGGVGGALQGVNTVASNATLQKNILL FT GTGDSLSVDAQAKASKESDANGAKLIAMQAQETMKKQTMDVLNAIQAGKEDSTNKKIS FT ATATNAKGISY" FT /colour=200 150 100 FT gene 1524281..1524622 FT /gene="hrpA1" FT /locus_tag="PSPTO1381" FT /colour=200 150 100 FT CDS 1524678..1525790 FT /gene="hrpZ1" FT /locus_tag="PSPTO1382" FT /note="similar to GP:790908, GB:U09066, SP:P01768, FT SP:P01769, SP:P01770, SP:P01771, SP:P01772, PID:483874, FT PID:488294, PID:496012, PID:496026, PID:499604, FT PID:553396, PID:553398, PID:553399, PID:553408, FT PID:553434, PID:553435, PID:553436, PID:553437, FT PID:553438, PID:553439, PID:553440, PID:553443, FT PID:553445, PID:553455, PID:567123, PID:567126, FT PID:567127, PID:587294, PID:587296, PID:587312, FT PID:618468, PID:619425, PID:619629, PID:619630, FT PID:758094, PID:773600, PID:790797, PID:791026, FT PID:901824, PID:901825, PID:940526, PID:945217, FT PID:963049, PID:976304, PID:976311, PID:976315, and FT PID:976342; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III helper protein HrpZ1" FT /protein_id="AAO54904.1" FT /db_xref="GI:28851828" FT /translation="MQALNSISSLQTSASLFPVSLNSDVSANTSTSSKELKAVIDQLV FT QALTQSGQLDETSPLGKMLAKAMAADGKSANSIDDITASLDKLIHEKLGDNFGASAGI FT GAGGGGGGIGGAGSGSGVGGGLSSDAGAGQSDLMSQVLNGLGKAVLDDLLTPSGEGGT FT TFSSDDMPTLEKVAQFMDDNKAQFPTRDGGSWMNELKEDNGLDAQETAQFRSALDVIG FT QQLGQQQGDASGVTSGGGLGSPVSDSSLGNPAIDANTGPAANGNASVDVGQLIGQLID FT RGLQSVSSGGGLGTPVDNSTQPTGGTPAANPTGNVSNQDLGQLLSGLLQRGLEATLQD FT AGNTGADLQSSAAQVAAQLINALLQGTNNQTNQAVA" FT /colour=200 150 100 FT gene 1524678..1525790 FT /gene="hrpZ1" FT /locus_tag="PSPTO1382" FT /colour=200 150 100 FT CDS 1525818..1526192 FT /gene="hrpB(Pto)" FT /locus_tag="PSPTO1383" FT /note="similar to GP:790909, GB:U09066, SP:P01768, FT SP:P01769, SP:P01770, SP:P01771, SP:P01772, PID:483874, FT PID:488294, PID:496012, PID:496026, PID:499604, FT PID:553396, PID:553398, PID:553399, PID:553408, FT PID:553434, PID:553435, PID:553436, PID:553437, FT PID:553438, PID:553439, PID:553440, PID:553443, FT PID:553445, PID:553455, PID:567123, PID:567126, FT PID:567127, PID:587294, PID:587296, PID:587312, FT PID:618468, PID:619425, PID:619629, PID:619630, FT PID:758094, PID:773600, PID:790797, PID:791026, FT PID:901824, PID:901825, PID:940526, PID:945217, FT PID:963049, PID:976304, PID:976311, PID:976315, and FT PID:976342; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpB(Pto)" FT /protein_id="AAO54905.1" FT /db_xref="GI:28851829" FT /translation="MTISQLSNLKSVSPELGQNAHQGLGSEPVQADVDLFNAAMRPDS FT GPAASHLSDRIASALSERLGSTEKLSQQALRQMKKVSNTEDPGDIVQMSRALSQCSLQ FT MALTTKVVSKSAQALDKLTNLQ" FT /colour=200 150 100 FT gene 1525818..1526192 FT /gene="hrpB(Pto)" FT /locus_tag="PSPTO1383" FT /colour=200 150 100 FT CDS 1526201..1527007 FT /gene="hrcJ" FT /locus_tag="PSPTO1384" FT /note="similar to GP:9800448, GB:U09068, PID:483878, FT PID:563405, PID:563415, PID:563418, PID:563428, FT PID:563458, PID:563460, PID:563477, PID:563481, and FT PID:976302; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcJ" FT /protein_id="AAO54906.1" FT /db_xref="GI:28851830" FT /translation="MNFLSAGLLLLCMLLLGGCSDETDLFTGLSEQDSNEVVARLADQ FT HIDARKRLEKTGVVVTVATSEMNRAVRVLDAAGLPRRSRTTLGEIFKKEGVISTPLEE FT RARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDP FT DSVRGRIQQMVASSIPGMSTQSVDSKKFSIVFVPAAEFQETTQWVSFGPFKLDSTNLP FT FWNLMLWVAPVGLALVLLIGALLVRSDWRASLLRRIGFGSRGRSTLPARA" FT /colour=200 150 100 FT gene 1526201..1527007 FT /gene="hrcJ" FT /locus_tag="PSPTO1384" FT /colour=200 150 100 FT CDS 1527004..1527534 FT /gene="hrpD" FT /locus_tag="PSPTO1385" FT /note="similar to GP:3603316, and GP:9800449; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpD" FT /protein_id="AAO54907.1" FT /db_xref="GI:28851831" FT /translation="MMSLSAEDHWIHWWCNPWQWAHSEWHDRFANARGLSVSDCDALM FT ASRHGVFLQSLGIDPAQPPAPAEPVLRWLALTPSQREQALSLAQCICFSRNESDGPDG FT QWCWGLTKALRPGVWLEFEHEDARLLLGAWLGPQYWSRLCLEWPPNEVPDTPGKAPEN FT KLQALWQAIMWRVTAA" FT /colour=200 150 100 FT gene 1527004..1527534 FT /gene="hrpD" FT /locus_tag="PSPTO1385" FT /colour=200 150 100 FT CDS 1527570..1528151 FT /gene="hrpE" FT /locus_tag="PSPTO1386" FT /note="similar to GP:790912, GB:U09068, PID:483878, FT PID:563405, PID:563415, PID:563418, PID:563428, FT PID:563458, PID:563460, PID:563477, PID:563481, and FT PID:976302; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpE" FT /protein_id="AAO54908.1" FT /db_xref="GI:28851832" FT /translation="MLAKRSIALTAATLLREPILRREDIADSLLARDILADARQQATQ FT ILALEQEKAEHLQQQALAQFWENANAFLGELQVQREALQEQAMTAVEELLSESLRHLL FT DDTTLAERARALARNLAASQLNEAVATLSVHPQIADAVAEWLADSRFSEHWQLKRDAT FT IASDSLRLSDANGAFDIAWADLRKGLLGVEPAA" FT /colour=200 150 100 FT gene 1527570..1528151 FT /gene="hrpE" FT /locus_tag="PSPTO1386" FT /colour=200 150 100 FT promoter 1528184..1528216 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1528246..1528470 FT /gene="hrpF" FT /locus_tag="PSPTO1387" FT /note="similar to GP:3228545, GB:U09067, PID:483876, and FT PID:553456; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpF" FT /protein_id="AAO54909.1" FT /db_xref="GI:28851833" FT /translation="MISFNSLQRHLDNSVSRAHTNMDQAAMEASESGTVEDLQAFNDA FT QQQVDVAGIAVNECLRAKHGINKAVIDGIQ" FT /colour=200 150 100 FT gene 1528246..1528470 FT /gene="hrpF" FT /locus_tag="PSPTO1387" FT /colour=200 150 100 FT CDS 1528457..1528888 FT /gene="hrpG" FT /locus_tag="PSPTO1388" FT /note="similar to GP:3603319, and GP:3228546; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpG" FT /protein_id="AAO54910.1" FT /db_xref="GI:28851834" FT /translation="MEFSEFTEIVGQWSAQRPAMPLDCWIDDANARLAVVGDGVRCSI FT ELLDPYDAGDPQRLEALLGEGGASLACACDGALAIDPQTRCVVLVSWMANPCSLGDLL FT DRLESLANQRAAMLSLMQTTIRNTTPTLSGRSILNHRQPGV" FT /colour=200 150 100 FT gene 1528457..1528888 FT /gene="hrpG" FT /locus_tag="PSPTO1388" FT /colour=200 150 100 FT CDS 1529049..1530989 FT /gene="hrcC" FT /locus_tag="PSPTO1389" FT /note="similar to GP:3228547, GB:M96789, SP:P35212, and FT PID:183223; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="outer-membrane type III secretion protein HrcC" FT /protein_id="AAO54911.1" FT /db_xref="GI:28851835" FT /translation="MSLDMSPVQGKLDGRIRAQNPEEFLERLSQEYHFQWFVYNDTLY FT VSPSSEHTSARIEVSPDAVDDLQTALTDVGLLDKRFGWGSLPDEGVVLVRGPAKYVEF FT VRDYSKKVEKPDEKADKQDVVVLPLKYANAADRTIRYRDQQLVVAGVASILQELLESR FT SRGESIDSVNLLPGQGSSVANSTGVAAAGLPYNLGSNGIDTGALQQGIDRVLNFNSKK FT TAKGHASGKANIRVSADVRNNSVLIYDLPERKAMYQKLVKELDVPRNLIEIDAVILDI FT DRNELAELSSRWNFNAGSVGGGANLFDAGTSSTLFLQNASKFSAELHALEGNGSASVI FT GNPSILTLENQPAVIDLSRTEYLTATSERAADILPITAGTSLQVIPRSLDNDGKPQVQ FT MIVDIEDGQIDVSTINDTQPSVRRGNVSTQAVIAEHGSLVIGGFHGLEANDRIHKIPL FT LGDIPYIGKLLFQSRSRELSQRERLFILTPRLIGDQVNPARYVQNGNPHDVDDQMKKI FT KERRDGGELPTRGDIQKVFTQMIDGAAPEGLRAGQTLPFETDSLCDPGEGLTLDGQRS FT QWFVKKDWGVAVVVARNNTDKPVRIDESRCGGRWVIGVAAWPHAWLQPGEESEVYIAV FT RQPQISKMAKESRPSLLRGAKP" FT /colour=200 150 100 FT gene 1529049..1530989 FT /gene="hrcC" FT /locus_tag="PSPTO1389" FT /colour=200 150 100 FT CDS 1530986..1531189 FT /gene="hrpT" FT /locus_tag="PSPTO1390" FT /note="similar to GP:3603321, and GP:3603255; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpT" FT /protein_id="AAO54912.1" FT /db_xref="GI:28851836" FT /translation="MMIRSLTLLLLLFATLTGCATHGCAGNACKRPDSNNRELVIWWP FT PDMREGLDDRDHERDYTVVQLKD" FT /colour=200 150 100 FT gene 1530986..1531189 FT /gene="hrpT" FT /locus_tag="PSPTO1390" FT /colour=200 150 100 FT CDS 1531192..1531551 FT /gene="hrpV" FT /locus_tag="PSPTO1391" FT /note="similar to GP:3603256, and GP:3228549; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="negative regulator of hrp expression HrpV" FT /protein_id="AAO54913.1" FT /db_xref="GI:28851837" FT /translation="MIEVTEKSAFYAQVAAQSPAVWPVANGVAFVSRREHHDWGIALH FT IEGRALRPDQLRDALQRRFMESERFNHYFLFLDVRRDFVVWHAVNEKPGSYASLDDIR FT RHELMLAGLDHLSEEMH" FT /colour=200 150 100 FT gene 1531192..1531551 FT /gene="hrpV" FT /locus_tag="PSPTO1391" FT /colour=200 150 100 FT CDS complement(1532093..1533172) FT /gene="hrcU" FT /locus_tag="PSPTO1392" FT /note="similar to GP:3282784, GB:U09068, PID:483878, FT PID:563405, PID:563415, PID:563418, PID:563428, FT PID:563458, PID:563460, PID:563477, PID:563481, and FT PID:976302; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcU" FT /protein_id="AAO54914.1" FT /db_xref="GI:28851838" FT /translation="MSEKTEKATPKQIRDAREKGQVGQSQDLGKLLVLLAVSEVTLGL FT ANESVNRLQALLALTFKGIERPFMSAVELIASEGLSVVLSFTLCSVGLAMLMRLISSW FT VQIGFLFAPKALKLDIKKIDPFSHAKQMFSGQNILNLLLSILKAVAIGATLYTQVKPA FT LGTLILLANSDLATYLHALIELFQHVLRVILGLLLVIALIDFAMQKYFHAKKLRMSHE FT DIKKEYKQSEGDPHVKGHRRQLAHEILNQEPSAAPKPVEEADMLLVNPTHYAVALYYR FT PGETPLPMIHCKGEDEDALALIAQAKKAGIPVVQSIWLARTLYKVNVGKYIPRPTLLA FT VGHIYKVVRQLEEITDEVIRIDDDM" FT /colour=200 150 100 FT gene complement(1532093..1533172) FT /gene="hrcU" FT /locus_tag="PSPTO1392" FT /colour=200 150 100 FT CDS complement(1533169..1533963) FT /gene="hrcT" FT /locus_tag="PSPTO1393" FT /note="similar to GP:3282783, and GP:11276518; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcT" FT /protein_id="AAO54915.1" FT /db_xref="GI:28851839" FT /translation="MPLDAQNFFDLILGMGLAMARLVPCMLLVPAFCFKYLKGPLRYA FT VVAVVAMIPAPGISRALTSLNDDWFAIGGLLLKEVVLGTLLGMLLYAPFWMFASVGAL FT LDSQRGALSGGQINPSLGPDATPLGELFQETLVMLVLISGGLSLITQVIWDSYMVWPP FT TSWLPGMTAEGLDVFLGQLNQTLQHMMLYAAPFIALLLLIEAALAIIGLYAQQLNVSI FT LAMPAKSMAGIAFLLVYLPTLLELGTGELSKLADLKSILGFVVQVP" FT /colour=200 150 100 FT gene complement(1533169..1533963) FT /gene="hrcT" FT /locus_tag="PSPTO1393" FT /colour=200 150 100 FT CDS complement(1533964..1534230) FT /gene="hrcS" FT /locus_tag="PSPTO1394" FT /note="similar to GP:3282782, and GP:11276517; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcS" FT /protein_id="AAO54916.1" FT /db_xref="GI:28851840" FT /translation="MEALALFKQGMFLVVILTAPPLGVAVLVGVITSLLQALMQIQDQ FT TLPFGIKLAAVGMTLAMTGRWIGVELIQFINMAFDLIARSGVVH" FT /colour=200 150 100 FT gene complement(1533964..1534230) FT /gene="hrcS" FT /locus_tag="PSPTO1394" FT /colour=200 150 100 FT CDS complement(1534238..1534840) FT /gene="hrcR" FT /locus_tag="PSPTO1395" FT /note="similar to GP:11276516; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcR" FT /protein_id="AAO54917.1" FT /db_xref="GI:28851841" FT /translation="MSLIPFLLIVCTAFLKIAMTLLITRNAIGVQQVPPNMALYGIAL FT AATMFVMAPVAHEMQQRVHDHPLELGNTEKLQASARTVIEPLQRFMTRNTDPDVVAHL FT LDNTQRMWPKEMADQASKNDLLLAIPAFVLSELQAGFEIGFLIYIPFIVIDLIVSNLL FT LALGMQMVSPMTLSLPLKLLLFVMVSGWSRLLDSLFYSYM" FT /colour=200 150 100 FT gene complement(1534238..1534840) FT /gene="hrcR" FT /locus_tag="PSPTO1395" FT /colour=200 150 100 FT CDS complement(1534888..1535301) FT /gene="hrcQb" FT /locus_tag="PSPTO1396" FT /note="similar to GP:11276515, and GP:11276515; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcQb" FT /protein_id="AAO54918.1" FT /db_xref="GI:28851842" FT /translation="MSTEDLYQDDVESLEDYDDETAEQEHEHEHEQQWAEPDDESEYA FT EAEPDDDEQEEQEEQQAPSGLDSLALDLTLRCGELRLTLAELRRLDAGTILEVGGVAP FT GYATLCHGERVVAEGELVDVDGRLGLQITRLAAQP" FT /colour=200 150 100 FT gene complement(1534888..1535301) FT /gene="hrcQb" FT /locus_tag="PSPTO1396" FT /colour=200 150 100 FT VR_#37 1535000..1552500 FT /colour=255 255 0 FT CDS complement(1535291..1536007) FT /gene="hrcQa" FT /locus_tag="PSPTO1397" FT /note="similar to GP:3282779, and GP:11276514; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcQa" FT /protein_id="AAO54919.1" FT /db_xref="GI:28851843" FT /translation="MSALCLRKVDPLLAKVSRELGAGQCLSFSAKGQQAELTLLPLIA FT SDETPAKGVWLNTAVGALCLSDAEALLSLLGDIPLTLGGEQQAWYWQFFNQRLSPTIA FT DLLAPVEPLPQACAELTVGCRIQVRLADQQVHAHLHATPETLLTLLRSAAWQARLKPL FT DERWSISTPLILGELSLTLEQLASLRPGDVLLPANCKFDSAGQGFLTLAGRQWAAQTD FT SQDQHLLLRLSHEEHSHHEY" FT /colour=200 150 100 FT gene complement(1535291..1536007) FT /gene="hrcQa" FT /locus_tag="PSPTO1397" FT /colour=200 150 100 FT CDS complement(1536004..1536573) FT /gene="hrpP" FT /locus_tag="PSPTO1398" FT /note="similar to GP:11276513, GB:L22846, SP:Q14209, and FT PID:410207; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpP" FT /protein_id="AAO54920.1" FT /db_xref="GI:28851844" FT /translation="MTAPIKTPAKAPPAPQRPAPVERPATALSEKPFGEKRPASGGLG FT RGDVQTSRSVLSKSLQDTPMSADGMFFSQLLVPPVSAEPGQQGFGGGGIAFPVRAEQV FT PTQLIDELAQRLPDQPDGPLSFTLLMPSLGSVRVNANKTENRWSVQLGFARRDVLKRL FT SAHTGACRDSLSQALGQDVELDMHEDLSA" FT /colour=200 150 100 FT gene complement(1536004..1536573) FT /gene="hrpP" FT /locus_tag="PSPTO1398" FT /colour=200 150 100 FT CDS complement(1536580..1537026) FT /gene="hrpO" FT /locus_tag="PSPTO1399" FT /note="similar to GP:3282777, and GP:11276512; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpO" FT /protein_id="AAO54921.1" FT /db_xref="GI:28851845" FT /translation="MDETLEEDPQREALEQVISLLTPLRQHRQASAERAHRQAQVELK FT SMLDHLSETRASLDQERDNHKRRRESLSQDHLQKTISLNDVDRWHEKEKNMLDRLAFI FT RQDVQQQQLRVAEQQTLLEHKRLQAKASQRAVEKLACMEETLNEEG" FT /colour=200 150 100 FT gene complement(1536580..1537026) FT /gene="hrpO" FT /locus_tag="PSPTO1399" FT /colour=200 150 100 FT promoter complement(1536874..1536905) FT /gene="hrpO" FT /locus_tag="PSPTO_1399" FT /old_locus_tag="PSPTO1399" FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS complement(1537029..1538378) FT /gene="hrcN" FT /locus_tag="PSPTO1400" FT /note="similar to GP:11276511, GB:J04478, GB:M11718, FT GB:X04758, GB:M10956, GB:M11135, SP:P05997, PID:1340175, FT PID:179694, PID:179698, PID:180428, PID:180913, FT PID:2370202, and PID:553235; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion cytoplasmic ATPase HrcN" FT /protein_id="AAO54922.1" FT /db_xref="GI:28851846" FT /translation="MNAALNQWKDTHAARLSQYSAVRVSGRVSAVRGILLECKIPAAK FT VGDLCEVSKADGSFLLAEIVGFTQECTLLSALGAPDGIQVGAPIRPLGIAHRIGVDDT FT LLGCVLDGFGRPLLGDCLGAFAGPDDRRDTLPVIADALPPTQRPRITRSLPTGIRAID FT SAILLGEGQRVGLFAGAGCGKTTLMAELARNMDCDVIVFGLIGERGRELREFLDHELD FT ETLRARSVLVCATSDRSSMERARAAFTATAIAEAFRARGQKVLLLLDSLTRFARAQRE FT IGIASGEPLGRGGLPPSVYTLLPRLVERAGMSENGSITALYTVLIEQDSMNDPVADEV FT RSLLDGHIVLSRKLAERGHYPAIDVSASISRILSNVTGRDHQRANNRLRQLLAAYKQV FT EMLLRLGEYQAGADPVTDCAVQLNDAINAFLRQDLREPVPLQETLDGLLRITSQLPE" FT /colour=200 150 100 FT gene complement(1537029..1538378) FT /gene="hrcN" FT /locus_tag="PSPTO1400" FT /colour=200 150 100 FT CDS complement(1538375..1539367) FT /gene="hrpQ" FT /locus_tag="PSPTO1401" FT /note="similar to GP:11276510; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpQ" FT /protein_id="AAO54923.1" FT /db_xref="GI:28851847" FT /translation="MFELRVLNGQHQGAALPLIGEQWSIGSAQQQDLALDDSGVESLH FT CRLQRLDDSWTLNAEEGAVCDEEGHSQASVDLTLNTAFMLGSVWLCVSPAGDEWPSVP FT AVIPKQPQAEAEPARHEAPLEKVKSRSQFLNRTTGIIAGLLVGVIGSAWSLTRPAAIV FT LDQGPAHIASAMTTAPGMPNAAPKTSQPAAKPAGPATDKRVRLASMEAVRHQLTTMLS FT DRMLTDVSVAETPEGLMLNGHLKEESLVVYQRMLQRFKDRYDSPVTVLDNVASARNTL FT PFVVVQIMTGPHAHLVTADGRRMYVGDEKDGLRLTKIDDQRLQFDGDRHIEVTW" FT /colour=200 150 100 FT gene complement(1538375..1539367) FT /gene="hrpQ" FT /locus_tag="PSPTO1401" FT /colour=200 150 100 FT CDS complement(1539401..1541488) FT /gene="hrcV" FT /locus_tag="PSPTO1402" FT /note="similar to GP:11276509, GB:M27160, GB:M63235, FT GB:M63236, GB:M63237, GB:M63238, GB:M63239, GB:Y00819, FT GB:J03581, GB:U01873, SP:P14679, PID:340035, PID:340037, FT PID:340040, PID:37507, PID:37509, and PID:403422; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrcV" FT /protein_id="AAO54924.1" FT /db_xref="GI:28851848" FT /translation="MNQIINFLNMVALSAMRRSEVVGAFFVIAIVFMMITPLPTGLVD FT VLIAVNICISCLLIMLAMHLPRPLAFSTFPAVLLLTTMFRLALSISTTRLILLNQDAG FT HIVEAFGQFVVGGNLAVGLVIFLILTVVNFLVITKGSERVAEVGARFTLDAMPGKQMS FT IDSDLRANLISVYEARNRRSELNKESQLFGAMDGAMKFVNGDAIASLIIVAINMIGGI FT SIGVVQHGMTAGDALQLYTVLTIGDGLIAQIPALLISVTCGMIITRVPNTEAGVEANI FT GREIAEQITSQPKAWIIAAVAMLGFAALPGMPTGVFITIAIICGAGGMLQLQRAKPKA FT EEQGAVAVAPEMNGKEDLRTFSPSRQFVLQFHPGQNSALVDALVSEIRQRRNRLVVQF FT GLTLPSFIIEYVDHLQPDEFRFTVYDVPMLKATFTQTHVAVDVRQFNGEDVPAAISGT FT TDRQEDQWVWLPAEQGGELATVSSMTLITERMERALQSCGPQFIGLQETKAILGWLES FT EQPELAQEMQRVLTLTRFSAVLQRLASECVPLRAIRVIAETLIEHCQHERDTNVLTDY FT VRIALKSQIYHQYCGADGLQVWLLTPESEGLLRDGLRQTQTETFFALSNDISQMLVQQ FT LHIAFPLRAPEQAVLLVAQDLRSPLRTLLREEFYHVPVLSFAEISNAAKVRVMGRFDL FT EDDLEPMDNEHAA" FT /colour=200 150 100 FT gene complement(1539401..1541488) FT /gene="hrcV" FT /locus_tag="PSPTO1402" FT /colour=200 150 100 FT CDS complement(1541488..1542594) FT /gene="hrpJ" FT /locus_tag="PSPTO1403" FT /note="similar to GP:11276508, GB:X73459, GB:U07857, FT SP:P37108, PID:313661, and PID:468209; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III secretion protein HrpJ" FT /protein_id="AAO54925.1" FT /db_xref="GI:28851849" FT /translation="MKIVAPPIMRILPVAPTRVVTPAAQPLPNADLHNSGTSPQQVSR FT FAAALIQHRRILIQRDLIASNNALQSRAVKLGELYQLLMTDQDTGLDNAARVLRKKLM FT QDDSSSDLKQVLDYTDGDAAKAHVVLQAARKQAEADGEMGEHVVLTQQLKQLRRKYGP FT RARAGINSAKAFARPNIDNKRRVALRNLYSVAVSGQPNITGLIEALLGEQQEAGQFNI FT DLRDMRTAIADDLSAMTPSASHEQLRTLMHGLNTARHVTTLLKGCEHLLGRMRNKNPD FT LTVDPPAFLKHLLTLTANGMNVNQTLQLTQHIGGKQLKHQLAFLNGLRPMLLQLPILL FT WRDMKSRQTALSNLLILMAELTTQEQKQLYGGLV" FT /colour=200 150 100 FT gene complement(1541488..1542594) FT /gene="hrpJ" FT /locus_tag="PSPTO1403" FT /colour=200 150 100 FT promoter 1542129..1542182 FT /note="putative CorR binding site; identified by gel-shift FT assays and sequence alignment; downstream gene(s) exhibit FT CorR-dependent diffential expression; PMID: 16838789" FT /experiment="gel-shift assay" FT promoter complement(1542621..1542653) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1542838..1543392 FT /gene="hrpL" FT /locus_tag="PSPTO1404" FT /note="similar to GP:5360281, and SP:P37929; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="RNA polymerase sigma factor HrpL" FT /protein_id="AAO54926.1" FT /db_xref="GI:28851850" FT /translation="MFQKIVILDSTQPRQPSSSAGIRQMTADQIQMLRAFIQKRVMNP FT DDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQESWEDE FT VHSELEGHGDVSHQVEGHRQLARVIQAIDCLPSNMQKVLEVSLEMDGNYQETANSLGV FT PIGTVRSRLSRARVQLKQQIDPFA" FT /colour=200 150 100 FT gene 1542838..1543392 FT /gene="hrpL" FT /locus_tag="PSPTO1404" FT /colour=200 150 100 FT promoter 1543416..1543447 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1543479..1545821 FT /gene="hrpK1" FT /locus_tag="PSPTO1405" FT /note="similar to GP:8037778, and GP:8037778; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III helper protein HrpK1" FT /protein_id="AAO54927.1" FT /db_xref="GI:28851851" FT /translation="MRISSSPFVIVNQPTPGELALAVESPLAKALPTPVGGGGQAGVQ FT FGQPAGNTQGAPTGAEQTASSILALLLQGSGGAAANANVNNQVQPQPCADSPAEAAPT FT EATAPAAPVEQVAAPTNTDATDASNAPKAADAAFLDNSEYSSPEALKRWEPMVAHLPP FT EEREQAAKELNRPIAAAWMARDDGPDAGKAMDFINANPALKTAVDVAQGGGNADGKIT FT NKDLKTFAKNMEKAADSADKDLANYTKDNPDADPQSLEMVRSAAVMRANMPLAIAADP FT HHAVDAADKTKVDGNVDAEDLKGLAQSNPGLSGALKQSCSTWSQPGFLGQVDEAGMSG FT RKKAAHSPDKMFDAKNLSEWIKKSAPTNGGQFASMLSDSATLNAVAGIDISKLDKDVF FT DKPKSYSGAQKAAVMVKLQQTQQSVIAGRSLRNTDKTEQGLNDRISQLQADPDVQAYL FT NKSIPEQERNLVRSDASLQKAVVEQTKNVNSGQALQTDMDKADKAVNKHNPNADYSGA FT ISGLSAQLQLQKDLFPDSKVPTTNQVLENKPDLQDKIATSYVTNFSEGGALKQLLGQK FT KSDASQSLQTADNQKAIYDSVLPPDFTENQHENYMNSTLGTLQDSKKGRKLLEGKSDE FT GGPSMLTQLAEAGVGGKALNSIVGFASVSSLIAHGDKLGATQAIYDSTRMGAEAIKGG FT IDAGAKMMGREASAGLGRLGGQMIGRAVGMVAGEATGLAAGAALGAAIPVVGWAIDGA FT LAVGFGISMIIDAVKKHKAQKAFDHNVDPVLDQFGIAKAH" FT /colour=255 0 0 FT gene 1543479..1545821 FT /gene="hrpK1" FT /locus_tag="PSPTO1405" FT /colour=255 0 0 FT CDS 1545896..1547296 FT /gene="hopB1" FT /locus_tag="PSPTO1406" FT /note="Also known as EEL ORF1 (PMID 10781092; Alfano et FT al, 2000) and HopPtoB (PMID 11872842; Guttman et al, FT 2002).; similar to GP:8037777; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopB1" FT /protein_id="AAO54928.1" FT /db_xref="GI:28851852" FT /translation="MRPVGGPAPGYYPPTYEAERPTAQAAGNDRARSSQASSSPAASV FT APETPMLGDLKRFPAGRYPDMKVENIRLKIEGQEPGGKDGVKHTRRRKPDAAGSSHVH FT GGQSVASTSASAQSKALQDTNFKASDLAELARWCESPHPYALAPSKAAGKSSQLSANV FT VSILLQEGKHALEQRLEAQGLKLADVVVSEGRDHLHINLNYLEMDSCLGTSKGLWAPD FT SNDKKLIAKAARYFDDFNAQKLPELAPLTKMKSKDSLGVMRELLRDAPGLVIGEGHNS FT TSSKRELINNMKSLKASGVTTLFMEHLCAESHDKALNNYLSAPKGSPMPARLKNYLDL FT QSQGHQAPEELHTKYNFTTLVEAAKHAGLRVVSLDTTSTYMAPEKAEIKRAQAMNYYA FT AEKIRLSKPEGKWVAFVGATHATSCDGVPGLAELHGVRSLVIDDLGLKSRATVDINVK FT NYGGKLNPDVRLSYKV" FT /colour=255 0 0 FT gene 1545896..1547296 FT /gene="hopB1" FT /locus_tag="PSPTO1406" FT /colour=255 0 0 FT CDS complement(1547542..1548369) FT /pseudo FT /color=178 58 238 FT promoter 1548389..1548420 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 1549288..1550133 FT /codon_start=1 FT /locus_tag="PSPTO1409" FT /orf_name="PSPTO_1409" FT /product="Hypothetical protein" FT /protein_id="AAO54930.1" FT /db_xref="HOGENOM:HBG266038" FT /db_xref="InterPro:IPR010846" FT /db_xref="TIGR:PSPTO1409" FT /db_xref="UniParc:UPI00000087C5" FT /db_xref="UniProtKB/TrEMBL:Q887B2" FT /transl_table=11 FT /translation="MQKTTLWALAFAMLAGCGVSGPAPGSDIQGAQAEMKTPVKLNLDA FT YTSKKLDAVLEARTNKSYMNKGQLIDLVSGAFLGTPYRSNMLVGSANVPEQLVIDFRGL FT DCFAYLDYVEAFRRSTSQQDFVRNLVQVRYKGGDVDFLNRKHFFTDWAYGTAYPVADDI FT TAQISPGAVSVRKRLNERAKGKVYLPGLPVVERSMTYIPSRLVDSQVVSHLRTGDYIGI FT YTPLPGLDVTHVGFFIVTDKGPVLRNASSRKENRKVMDLPFLDYVSEKPGIVVFRAKDN FT " FT /note="also known as EEL ORF2 (PMID 10781092; Alfano et FT al, 2000)" FT tRNA complement(1551777..1551861) FT /gene="tRNA-Leu-1" FT /product="tRNA-Leu" FT /note="codon recognized: UUG" FT CDS complement(1558205..1559665) FT /gene="PSPTO1418" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54939.1" FT /db_xref="GI:28851863" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(1558205..1559665) FT /gene="PSPTO1418" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54939.1" FT /db_xref="GI:28851863" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT CDS 1569793..1570551 FT /gene="pilF" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilF" FT /protein_id="NP_791258.1" FT /db_xref="GI:28868639" FT /translation="MSVRASLLLCAVVLLTGCVSTGNVNPMTTTQGREEARRAYVQLG FT LGYFEQGQTERAKVPLKKALELDSSDAQANAALALVFQTEMEPQLAEQYFRKALASSN FT NETRIVNNYGSFLFEQKRYQEAYERFEQAAADNLYPERSRVFESLGMTSLKLGNREQA FT REQFTKALRLDRQQPRSLLEMAQLYYEDRQYVPARDYYDRFSQLSEQNARSLLLGTRL FT AKVYDDRNKAASYGLQLKRLYPGTPEYQQYLSEQ" FT /colour=0 255 0 FT CW_VIR_gene 1569793..1570551 FT /gene="pilF" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1432" FT CDS complement(1577530..1578990) FT /gene="PSPTO1439" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54960.1" FT /db_xref="GI:28851884" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(1577530..1578990) FT /gene="PSPTO1439" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54960.1" FT /db_xref="GI:28851884" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT VR_#38 1590000..1600000 FT /colour=255 255 0 FT CDS complement(1593629..1594924) FT /gene="lsc-1" FT /note="similar to SP:O68609, and SP:O68609; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="levansucrase" FT /protein_id="NP_791279.1" FT /db_xref="GI:28868660" FT /translation="MSNSSSAVSQLKNSPLVGNINYAPTVWSRADALKVNENDPTTTQ FT PLVSPDFPVMSDTVFIWDTMPLRELDGTVVSVNGWSVILTLTADRHPNDPQYLDANGR FT YDIKRDWEDRHGRARMCYWYSRTGKDWIFGGRVMAEGVSPTTREWAGTPILLNDKGDI FT DLYYTCVTPGAAIAKVRGRIVTSDQGVELKDFTQVKKLFEADGTYYQTEAQNSSWNFR FT DPSPFIDPEDGKLYMVFEGNVAGERGSHTVGSVELGPVPPGHEDVGGARFQVGCIGLA FT VAKDLSGEEWEILPPLVTAVGVNDQTERPHYVFQDGKYYLFTISHKFTYADGVTGPDG FT VYGFVGEHLFGPYRPMNASGLVLGNPPEQPFQTYSHCVMPNGLVTSFIDSVPTIGEDY FT RIGGTEAPTVRILLKGDRSFVQEEYDYGYIPAMKDVTLS" FT /colour=0 255 0 FT CW_VIR_gene complement(1593629..1594924) FT /gene="lsc-1" FT /colour=0 255 0 FT /note="locus_tag: PSPTO1453" FT CDS complement(1621273..1622733) FT /gene="PSPTO1477" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54998.1" FT /db_xref="GI:28851923" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(1621273..1622733) FT /gene="PSPTO1477" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO54998.1" FT /db_xref="GI:28851923" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT CDS 1622850..1623746 FT /codon_start=1 FT /transl_table=11 FT /gene="xerD" FT /locus_tag="PSPTO_1478" FT /old_locus_tag="PSPTO1478" FT /product="integrase/recombinase XerD" FT /db_xref="GOA:Q886U8" FT /db_xref="HSSP:P0A8P8" FT /db_xref="InterPro:IPR002104" FT /db_xref="InterPro:IPR004107" FT /db_xref="InterPro:IPR010998" FT /db_xref="InterPro:IPR011010" FT /db_xref="InterPro:IPR011932" FT /db_xref="InterPro:IPR013762" FT /db_xref="UniProtKB/TrEMBL:Q886U8" FT /protein_id="AAO54999.1" FT /translation="MAAIDHPLIDRFLDALWLEKGLSDNTRDSYRSDLALFNGWLQERN FT VDLPGAGREVILDHLAWRVENAYKPRSTARFLSGARGFYRYLLREKLISVDPTLQIDMP FT QLGKPLPKSLSEADVEALLAAPDLSEPIGERDRAMLEVLYACGLRVTELISLTLEQVNL FT RQGVLRVMGKGSKERLVPMGEEAIVWVERYMRGARDELLGGKPSDVLFPSTRGDQMTRQ FT TFWHRIKHQATVAGIGKSLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTH FT VARARLQEMHAKHHPRG" FT /colour=178 58 238 FT gene 1622850..1623746 FT /gene="xerD" FT /locus_tag="PSPTO_1478" FT /old_locus_tag="PSPTO1478" FT /colour=178 58 238 FT VR_#40 1725000..1745941 FT /colour=255 255 0 FT CDS 1728650..1730110 FT /gene="PSPTO1567" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO55087.1" FT /db_xref="GI:28852012" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL 1728650..1730110 FT /gene="PSPTO1567" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO55087.1" FT /db_xref="GI:28852012" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT CDS complement(1730311..1731165) FT /gene="hopAF1" FT /locus_tag="PSPTO1568" FT /note="previously known as HolPtoN (PMID 11872842; Guttman FT et al, 2002) and HopPtoJ (PMID 12032338; Petnicki-Ocwieja FT et al, 2002)" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAF1" FT /protein_id="AAO55088.1" FT /db_xref="GI:28852013" FT /translation="MGLCISKHSGSSYSYSDSDRWQVPACPPNARSVSSHQTASASDI FT ASGDVDERPATFSHFQLARCGGEYTLSMVSAAAYQAERRHRGNLIKDRSQSILPWVQV FT YHSKKGLDYSFQIDRTTTVKVAGFNCSIPNNRGTRHLYSAGTSQTNMPVIADNMSACI FT AVACAAENVDAGTGERRPGAKVRVFHLLPFRREDLVPEEVLASVRDYLRTTKEQGLTM FT RVAMHGGNTEGDFSVSTAQALKGLFANEGIPLEFDETCANRTSETLLGAVILDDNSTH FT FIKHLVAQ" FT /colour=255 0 0 FT gene complement(1730311..1731165) FT /gene="hopAF1" FT /locus_tag="PSPTO1568" FT /colour=255 0 0 FT promoter complement(1731421..1731453) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT misc_feature 1752316..1752441 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.6e-13" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=42.500000 FT VR_#41 1767500..1782500 FT /colour=255 255 0 FT promoter complement(1779969..1780001) FT promoter 1802304..1802336 FT promoter 1802304..1802336 FT VR_#42 1810000..1845000 FT /colour=255 255 0 FT CDS complement(1824436..1825245) FT /gene="PSPTO1658" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO55178.1" FT /db_xref="GI:28852103" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(1824436..1825245) FT /gene="PSPTO1658" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO55178.1" FT /db_xref="GI:28852103" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(1825242..1826264) FT /gene="PSPTO1659" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO55179.1" FT /db_xref="GI:28852104" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(1825242..1826264) FT /gene="PSPTO1659" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO55179.1" FT /db_xref="GI:28852104" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT misc_feature 1889514..1889651 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.2e-12" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=39.500000 FT VR_#43 1920306..1929799 FT /colour=255 255 0 FT misc_feature 1947418..1947567 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.5e-08" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=25.900000 FT tRNA 1956097..1956172 FT /gene="tRNA-Glu-1" FT /product="tRNA-Glu" FT /note="codon recognized: GAA" FT tRNA 1956175..1956250 FT /gene="tRNA-Gly-2" FT /product="tRNA-Gly" FT /note="codon recognized: GGC" FT tRNA 1956350..1956425 FT /gene="tRNA-Glu-2" FT /product="tRNA-Glu" FT /note="codon recognized: GAA" FT tRNA 1956430..1956505 FT /gene="tRNA-Gly-3" FT /product="tRNA-Gly" FT /note="codon recognized: GGC" FT tRNA 2014810..2014900 FT /gene="tRNA-Ser-1" FT /product="tRNA-Ser" FT /note="codon recognized: AGC" FT tRNA 2015010..2015086 FT /gene="tRNA-Arg-2" FT /product="tRNA-Arg" FT /note="codon recognized: CGU" FT tRNA 2015174..2015250 FT /gene="tRNA-Arg-3" FT /product="tRNA-Arg" FT /note="codon recognized: CGU" FT VR_#44 2015294..2043020 FT /colour=255 255 0 FT tRNA 2019304..2019380 FT /gene="tRNA-Arg-4" FT /product="tRNA-Arg" FT /note="codon recognized: AGG" FT CDS 2050724..2051125 FT /gene="PSPTO1877" FT /note="This gene assignment is based in part on its FT position within a multicopy insertion sequence directly FT adjacent to an ORF matching several IS3 family FT transposases usign a blastp analysis.; identified by match FT to PFAM protein family HMM PF04218" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfA" FT /protein_id="AAO55395.1" FT /db_xref="GI:28852321" FT /translation="MDSGKRRSQRDYTLAFKLSVVDQVEKGELSYKEAQRRYGIQGRS FT TVLVWLRKHGRQDWSQGASIREQRSRSMTEPTLPPTPEQRIKELEEQLELSNQKAQFF FT EAVVNVLKNDYGVSVVKKPPGKSSRKGKSKT" FT /colour=178 58 238 FT MBL 2050724..2051125 FT /gene="PSPTO1877" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="This gene assignment is based in part on its FT position within a multicopy insertion sequence directly FT adjacent to an ORF matching several IS3 family FT transposases usign a blastp analysis.; identified by match FT to PFAM protein family HMM PF04218" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfA" FT /protein_id="AAO55395.1" FT /db_xref="GI:28852321" FT /translation="MDSGKRRSQRDYTLAFKLSVVDQVEKGELSYKEAQRRYGIQGRS FT TVLVWLRKHGRQDWSQGASIREQRSRSMTEPTLPPTPEQRIKELEEQLELSNQKAQFF FT EAVVNVLKNDYGVSVVKKPPGKSSRKGKSKT" FT CDS 2051139..2051957 FT /gene="PSPTO1878" FT /note="Note uncertainty about the start site in comparison FT to other versions of this ORF in the multicopy insertion FT sequence.; identified by match to PFAM protein family HMM FT PF00665" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfB" FT /protein_id="AAO55396.1" FT /db_xref="GI:28852322" FT /translation="MPVHGYFAPSVLQAYYKRNRAFDARVCQDQEVVDFVLEKRRRQP FT KLGTRKLHYLMSVEAPASSCVGRDRMFTILRGARELVPRKRAYHKTTHSHHRFRRHPN FT LLKAGPEQVVANGPEQVWVADITYLPTQESVAYVSLVTDAYSRKIVGHHVHESLHAQS FT VMKALEKAVGERKTDQMLIHHSDRGAQYCSDLYQQLHTRHGIRCSMTDGYDCYQNAMA FT ERVNGILKTEFLLHRPKDLADAVKMVDESVQIYNGERPHLSLKYKTPDAVHRAF" FT /colour=178 58 238 FT MBL 2051139..2051957 FT /gene="PSPTO1878" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="Note uncertainty about the start site in comparison FT to other versions of this ORF in the multicopy insertion FT sequence.; identified by match to PFAM protein family HMM FT PF00665" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfB" FT /protein_id="AAO55396.1" FT /db_xref="GI:28852322" FT /translation="MPVHGYFAPSVLQAYYKRNRAFDARVCQDQEVVDFVLEKRRRQP FT KLGTRKLHYLMSVEAPASSCVGRDRMFTILRGARELVPRKRAYHKTTHSHHRFRRHPN FT LLKAGPEQVVANGPEQVWVADITYLPTQESVAYVSLVTDAYSRKIVGHHVHESLHAQS FT VMKALEKAVGERKTDQMLIHHSDRGAQYCSDLYQQLHTRHGIRCSMTDGYDCYQNAMA FT ERVNGILKTEFLLHRPKDLADAVKMVDESVQIYNGERPHLSLKYKTPDAVHRAF" FT VR_#45 2080595..2085657 FT /colour=255 255 0 FT VR_#46 2093596..2103373 FT /colour=255 255 0 FT CDS complement(2107909..2108223) FT /gene="PSPTO1925" FT /note="similar to SP:P39809; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="negative regulator of flagellin synthesis FlgM, FT putative" FT /protein_id="NP_791748.1" FT /db_xref="GI:28869129" FT /translation="MVIDFSRLNNSQPVASTARTAASKDTAKTDAPAPAATAGVKSTG FT ETFSLSSEAQQLQKITDKLTDLPTVNSARVAELKQAIADGSYVVDSNRVASKLLNFET FT QR" FT /colour=152 251 152 FT FLAGELLA complement(2107909..2108223) FT /gene="PSPTO1925" FT /colour=152 251 152 FT CDS complement(2108384..2109130) FT /gene="PSPTO1926" FT /note="similar to SP:Q44339; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar protein, putative" FT /protein_id="NP_791749.1" FT /db_xref="GI:28869130" FT /translation="MTISRHLALETRWLLCAIALLCLSGTVSLARAENFTLPEQLIGV FT TQGFLEFTVEDYLATNQIDGRHDIQVKQLDPRLRMGACDKDLTATLESPRPVGRVTVR FT VRCEGSSPWTVFVPAQVQLFRNVVTVMRPLKRDAIVTEEDIAMRERDVSSLGQGFLAS FT LDQAVGQKVVRQMVIDQVITPVALEQPQMIHKGDQVVIIARSGSLAVRMPGEAMSDGG FT FNEQIRVKNLNSQRVIKANVTGPGQVEVAM" FT /colour=152 251 152 FT FLAGELLA complement(2108384..2109130) FT /gene="PSPTO1926" FT /colour=152 251 152 FT CDS 2111107..2112567 FT /gene="PSPTO1929" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO55447.1" FT /db_xref="GI:28852373" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL 2111107..2112567 FT /gene="PSPTO1929" FT /colour=178 58 238 FT CDS 2113970..2114377 FT /gene="flgB" FT /note="similar to SP:P75934, GB:J02874, SP:P15090, and FT PID:178347; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar basal-body rod protein FlgB" FT /protein_id="NP_791756.1" FT /db_xref="GI:28869137" FT /translation="MSISFDKALGIHEKALNFRAQRAEVLANNISNADTPNFKARDLE FT FSSVLAAENDKAQNGHFALNKTNSRHIEAEGMGNDDGTLMYRTPSQPSLDQNTVDSQV FT ETASYTENAMGFQASFTLLNSKFKGLVAALRGE" FT /colour=152 251 152 FT FLAGELLA 2113970..2114377 FT /gene="flgB" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1933" FT CDS 2114381..2114821 FT /gene="flgC" FT /note="similar to SP:P75935, GB:Z29327, and PID:441236; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar basal-body rod protein FlgC" FT /protein_id="NP_791757.1" FT /db_xref="GI:28869138" FT /translation="MSLANVFNIAGSAMSAQTTRLNTTASNIANAETVSSSMDQTYRA FT RHPVFATVMQGQQSTGGSLFQDQGEAGQGVQVNGIIEDSSNLEARYEPNHPSADKDGY FT VYYPNVNVVEEMADMISASRSFQTNAEIMNTAKSMMQKVLTLGQ" FT /colour=152 251 152 FT FLAGELLA 2114381..2114821 FT /gene="flgC" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1934" FT CDS 2114837..2115526 FT /gene="flgD" FT /note="similar to GP:5361007, and SP:P16321; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="basal-body rod modification protein FlgD" FT /protein_id="NP_791758.1" FT /db_xref="GI:28869139" FT /translation="MAVDSTSASTVSSTFLDKLQNPTATTTNSTGTLGKDAFLQLLVT FT QMKNQNPLDPQDNTQFVAQLAQFSSLESMQNLTKTVDTIASSYQSSQALQASSLVGRS FT VIIDSSSTTVDTTKGMTGSIVLPSATSATSVKVYDAQSNLVDTVELGAQKAGTISFAW FT DGTDGDGAAVASGNYTFKAEGSVDGKNTQLSTYLPATVNSVTLGVNGAETMLNLASGS FT VALSKVQTIGL" FT /colour=152 251 152 FT FLAGELLA 2114837..2115526 FT /gene="flgD" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1935" FT CDS 2115552..2116877 FT /gene="flgE-1" FT /note="similar to SP:P75937; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar hook protein FlgE" FT /protein_id="NP_791759.1" FT /db_xref="GI:28869140" FT /translation="MSFNIGLSGLYAANKSLDVTGNNIANVATTGFKSSRAEFADQYA FT QSIRGTSGQTNVGSGVSTAAVSQQFSQGNLTTGTANSLDLAINGNGFFMLSNNGEKLY FT TRAGAFHTDKEGFVVNSGGMKLQGYNVDANGSVVTGALSDLKVDSSNLEPKATSAITN FT VANLNSTTALPTLTTFDATDTKSYNMKYSTPTYDTQGNAHTLDQYFVKTGTNTWSMYS FT LMDGRSISDPTTTAADKNDLTFDSSGNLVVAAPGTVPSDSANIKFNTDGTFTVANWVP FT GVQTGTGTTTSWVANGATGASIKLNMAGITQTASVSGLITQDQDGYATGQLSAMSVDA FT TGNLFATYTNGKSQVIGQTSLTNFANVQGLAQAGGTNWRETFASGVPVSGVPESGTLG FT YITGQALEESNVDLTMELVNLIKAQSNYQANAKTISTQSTIMQTTIQMT" FT /colour=152 251 152 FT FLAGELLA 2115552..2116877 FT /gene="flgE-1" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1936" FT CDS 2117067..2118827 FT /gene="flgE-2" FT /note="similar to SP:P75937; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar hook protein FlgE" FT /protein_id="NP_791760.1" FT /db_xref="GI:28869141" FT /translation="MSFNTAISGINAANKRLEVAGNNIANSGTIGFKSSRAQFSALYS FT SAQLGSGRNAIGDGVRLAATQQNFNQGDSMTTSGNPLDMRIQGNGFFVVSDKGSLAYT FT RAGAFLKDAANFVVDSEGGRLQGYAANDNGEIMRGLRTDLQIDTSNVAARATTRVAEN FT INLDASLPSLARLPAFDPADPATYTRAIGRTIQDAGSGTGAGAVPAADHELKQYFVKT FT GDSQWSMYVLVDGRNPVDPNSVAPLHVTLEQKPNGSLSYSGNSQHLRKISDTEFALQG FT WRPAHEVNGAWMSNGAASGGAVSLPLIDGSASMLDPADAVMDRPVPAFDSLDLKTYSD FT MFANAIFDSQGNQHELKQYFVKDGNNSWRMHVLIDGRNPQMPDSTEPLTANIVFDSGG FT SVRSLTGSSGLVSTNGGGLQLNGWTPAMPAERVTGQDRWVSNGAAGSANGIELDFTNL FT LQHNAASSRSSTHVDGHAAGQLSSLSVGRDGILRAGFTNGMNKNIGQVILASFANPQG FT LQARSDTRWTESAESGVADYEVPGVGTLGSLVGGALEGSNVVLADELIALIQAQTAYQ FT ANSKAISTEATVMQTLIQST" FT /colour=152 251 152 FT FLAGELLA 2117067..2118827 FT /gene="flgE-2" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1937" FT CDS 2119303..2120043 FT /gene="flgF" FT /note="similar to SP:P75938; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar basal-body rod protein FlgF" FT /protein_id="NP_791762.1" FT /db_xref="GI:28869143" FT /translation="MDKLLYVAMSGASENAIAQKAHANNLANVSTNGFMRDLEQARSM FT PVFGEVMPSRAYAMSERPGTDFSGGAMVETGRELDIAIKGDGWIAVQTPDGGEAYTRS FT SGMNIDALGVLRDGSGLPVMGNGGPIAVPPQQQIEIGADGTISIRSLGESPQVMAQVD FT RIKLVKPDLKTMEKGPDGLIHTKSGRPADADATVQVESGFLQASNVNAVEEMTSVLAL FT SRQFELHVKMMKTAEEDDQSMARVLQLG" FT /colour=152 251 152 FT FLAGELLA 2119303..2120043 FT /gene="flgF" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1939" FT CDS 2120090..2120878 FT /gene="flgG" FT /note="similar to SP:P75939, GB:M11186, GB:M62611, FT SP:P01178, PID:189411, PID:386991, and PID:825699; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar basal-body rod protein FlgG" FT /protein_id="NP_791763.1" FT /db_xref="GI:28869144" FT /translation="MLPALYVAKTGLAAQDTNLTTISNNLANVSTTGFKSDRAEFQDL FT LYQIKRQPGAQSTQDSELPSGLQLGTGVRIVGTQKNFTAGSLQTTNNPLDLAVNGRGF FT FQVTQPDGTVAYSRDGTFHLDANGQIVTANGYALEPAIVVPQNAQTFTVGQDGTVSVT FT LAGATATPQIIGNIQTADFINPAGLQAIGGNLYLETGSSGAPQIGTPGLNGLGPTLQN FT TLENSNVSTVEELVNMITTQRAYEMNSKVISTADQMLQNLTQNL" FT /colour=152 251 152 FT FLAGELLA 2120090..2120878 FT /gene="flgG" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1940" FT CDS 2120963..2121676 FT /gene="flgH" FT /note="similar to SP:P75940, GB:M27132, GB:M19483, FT GB:M19482, GB:X03559, GB:D00022, GB:X05606, SP:P06576, FT PID:179279, PID:179281, PID:219654, PID:28931, and FT PID:28940; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar L-ring protein FlgH" FT /protein_id="NP_791764.1" FT /db_xref="GI:28869145" FT /translation="MNRPGFPRFSVLIASLCGITLLSGCVAPTAKPNDPYYAPVLPRT FT PMSAASNNGAIYQAGFEQNLYGDRKAFRVGDIITITLSERMAASKAATSAMSKDSTNS FT IGLTSLFGSGLTTNNPIGGNDLSLSAGYNGARTTKGDGKAAQSNSLTGSVTVTVADVL FT PNGILSVRGEKWMTLNTGDELVRIAGLVRADDIATDNTVSSTRIADARITYSGTGAFA FT DTSQPGWFDRFFLSPLFPF" FT /colour=152 251 152 FT FLAGELLA 2120963..2121676 FT /gene="flgH" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1941" FT CDS 2121690..2122799 FT /gene="flgI" FT /note="identified by match to PFAM protein family HMM FT PF02119" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar P-ring protein FlgI" FT /protein_id="NP_791765.1" FT /db_xref="GI:28869146" FT /translation="MIKLKQLIAATLLLSAAFGAHAERLKDIASISGVRANQLIGYGL FT VVGLNGTGDQTTQTPFTLQTFNNMLSQFGIKVPAGSGTVQLKNVAAVAVYADLPAFAK FT PGQTVDITVSSIGNSKSLRGGALLMTPMKGVDGNVYAIAQGNLVVGGFDAEGRDGSKI FT TVNVPSSGRIPGGASVERSVPSGFNQGNTLTLNLNRSDFTTAKRVVDKINELLGPGVA FT QALDGGSVRVTAPLDPGQRVDYLSILENLEVDPGQTAAKVIINSRTGTIVIGQNVKVS FT PAAVTHGSLTVTITEDPIVSQPGALSGGQTAVVPRSRVNAQQELHPMFKFGPGTTLDE FT IVRAVNQVGAAPGDLMAILEALKQAGALQADLIVI" FT /colour=152 251 152 FT FLAGELLA 2121690..2122799 FT /gene="flgI" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1942" FT CDS 2122810..2124060 FT /gene="flgJ" FT /note="similar to SP:P75942; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="peptidoglycan hydrolase FlgJ" FT /protein_id="NP_791766.1" FT /db_xref="GI:28869147" FT /translation="MDMPKSGISSAVDSGAYTDVNRLAALKHGDKDSVANQKKVAQEF FT ESLFVSQMLKAMRSANEVLAKDNPMNTPATRQYQDMYDQQLAVTLSTRGNGIGLQDVL FT MRQLSKDKGINHAAATNTTDTAKAATATDAAPAKTGLATSVYQRPLWATRSAAADQAA FT AAVSASGEGRNDMAALNARRLSLPTKLTDRLLAGIVPSATAAVSNSPAPTRATASTPG FT NNGDWTLDPNLAPAPEYVRSMAQPPLAPAKRAFSNADQFVETMLPLAKEAAARIGVDP FT VMLVAQAALETGWGKSIMRQQDGSSSHNLFGIKAAGSWKGAEARAITSEFRDGKMVKE FT TADFRSYDSYADSFHDLVSLLQNNNRYKDVVNSADKPEQFVKELQKAGYATDPAYASK FT ISQIAKQMKSYQTYAAATGSSTTL" FT /colour=152 251 152 FT FLAGELLA 2122810..2124060 FT /gene="flgJ" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1943" FT CDS 2124072..2126132 FT /gene="flgK" FT /note="similar to GP:13183733, and SP:P33235; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar hook-associated protein FlgK" FT /protein_id="NP_791767.1" FT /db_xref="GI:28869148" FT /translation="MSLISIGLSGINASSAAINTIGNNTANVDTAGYSRQQVMTTASA FT QINIGLGVGYIGTGTTLSDVRRIYNGYLDAQLQTSTALSADAVAYSGQASKTDTLLSD FT SATGVSTQLADFFTKMQGIATNATQSSDRSSFLTQASALSSRFNSVASQLSSQNDNVN FT AQLTTFTKQVNELTTTLASLNKQITQAGAGNTTPNSLLDSRNEAVRQLNGLVGVKVVE FT NNGNYDIYTGTGQSLVSGGTSYTMSATPSPADPLQYNVQIAYGQTKTDVTSVITGGSI FT GGLLRYRSDVLVPATNELGRAAMVLADQVNSQMSQGIDSKGNFGSSLYANINSADAIS FT QRSTGKTTNSAGSGNLDVTIGDTSKLTADDYEVTFNDASNFTVRRLPNGESVGTGALT FT DNPPKQFDGFSVSLKGNALAAGDIFKVTPTRNGASGISVVLTDPKDIAAAAPLTATAG FT ASNSGTGGFTQPVLSTKSNIYNSVQTADLRNAVKDSAPMKLVMGAVSSTGVQSYTLIN FT ASGSPVLDQNGSAVSGTIIQGQSNALKLSVGYTDNTTTPASKTAFEVQMTLSGSPLAN FT DTFSIGLTGAGSSDNRNALAIVGLQTAKTVGVTNGGVGTSLSGAYSDLVSVVGTLAGQ FT GKSDVTASAAVVAQAKSARDSVSGVSLDEEAANLIKYQQYYTASSQIIKAAQTIFSTL FT INSL" FT /colour=152 251 152 FT FLAGELLA 2124072..2126132 FT /gene="flgK" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1944" FT CDS 2126146..2127738 FT /gene="flgL" FT /note="similar to SP:P29744; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar hook-associated protein FlgL" FT /protein_id="NP_791768.1" FT /db_xref="GI:28869149" FT /translation="MRISTTQFFESTNANYQRNYANVIKTGDEVTSGIKLNTASDDPV FT GAARVLQLAQQNSMLTQYASNIGTINTNIVNSETALTSIVDTMQAAREVVVSAGNGAY FT TDSDRLAKAAELKQYQSQILGLMNSQDANGQYIFAGSKSSAPPYAQNADGTYSYSGDQ FT TSVNLAIGDGLVLPSNTTGHEAFEQAVNTTRTSSTLLSPATDDGKVGLTGGQVKSTSA FT YNAGYQAGEPYTMTFLSGTQFKITDATGTDVTTDASSAGKFNYASFSDQTFTFRGVEL FT TMNVNLSAAESATAATAATALTNRSYELASTPDTVSASRSPGNTSAATISSSAVGNTT FT ADRTAFNNTFPPNGAILKFTSATAYDLYASPVTSSSKPVSSGTLTGSTANASGVNFTV FT SGTPAAGDQFVVESGTHQTENILNTLTAAIKALSTPTDGNLVASQKLDAALGSALGNI FT SSSIDQASTARSAGGARQLAATAQGTTNELLKGNNTVEQGTYVNADIVEATTRLTLQK FT TMLDASQQVFVQLSKLNLFSQL" FT /colour=152 251 152 FT FLAGELLA 2126146..2127738 FT /gene="flgL" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1945" FT CDS 2135981..2136829 FT /gene="PSPTO1949" FT /note="similar to GP:3851066, and GP:3851064; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellin" FT /protein_id="NP_791772.1" FT /db_xref="GI:28869153" FT /translation="MALTVNTNVASLNVQKNLGRASDALSTSMTRLSSGLKINSAKDD FT AAGLQIATKITSQIRGQTMAIKNANDGMSLAQTAEGALQESTNILQRMRELAVQSRND FT SNSATDREALNKEFTAMSSELTRIAQSTNLNGKNLLDGSASTMTFQVGSNSGASNQIS FT LTLSASFDANTLGVGSAISITGADSATSEAAFSAAVAAIDSALQTINSTRADLGAAQN FT RLTSTISNLQNINENASAALGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSA FT VLKLLQ" FT /colour=152 251 152 FT FLAGELLA 2135981..2136829 FT /gene="PSPTO1949" FT /colour=152 251 152 FT CDS 2136896..2137294 FT /gene="PSPTO1950" FT /note="similar to GP:2384651, GB:M32101, SP:P16701, FT PID:145659, GB:U00096, PID:1788764, PID:1799843, and FT PID:1799853; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellin FlaG, putative" FT /protein_id="NP_791773.1" FT /db_xref="GI:28869154" FT /translation="MVMDMSVKLNVSYPAVQPASQAPVSDKSVDKPADVKSVERVAAP FT EESKGSDLHKDDSQDEAKVKAAAEDIQKFFHSVKRNLEFSIDEASGKVIVKVIASDSG FT EVVRQIPNAEILKLADSLSDANSLLFRARA" FT /colour=152 251 152 FT FLAGELLA 2136896..2137294 FT /gene="PSPTO1950" FT /colour=152 251 152 FT CDS 2137378..2138856 FT /gene="fliD" FT /note="similar to GP:7081488, and SP:P24216; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar hook-associated protein FliD" FT /protein_id="NP_791774.1" FT /db_xref="GI:28869155" FT /translation="MASPITSTTGLGSGLAITAIVQGLVGAEKAPKQNQIDKQTATTS FT ASLSGVSQLTSALAAFQKTLDTLGSSTTPAFQGFAATSANEAVVKATAGNTAVNGSYA FT IGITQLATPSKVATAALSSTQASAIPSGTLKITQNGTDYSVAIDKTSTLQEVRDKINS FT SLQGKGITANIINDDNGARLVFSSTTTGKGSDISVVGASGQEALNIDGTKLMSDSSTG FT TDASGKAIPGAGAITATAKDAAFTVDGLSLTSKTNTVSTAISGMTFDLVAPSAAGATT FT TVTVATNTDGLKASLQSFVDSYNTLATLVTSLTKGSISDKGVFTAAALTGDATPRALL FT ATIRDQLAGASSRAGLSALSQLGIKTQQSNGTLSLDTATFTAALNDKKLGSQIQTMFT FT GTGATNADGTVDGGLVARMSKALLPYTKADGVLASKTSSLTKVQTRIASDQDALDRRI FT ESLTASLTKKYNAMDLVVGQLKATATSITSIFEAMNAQKNAS" FT /colour=152 251 152 FT FLAGELLA 2137378..2138856 FT /gene="fliD" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1951" FT CDS 2138982..2139371 FT /gene="fliS" FT /note="similar to SP:P26608; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar protein FliS" FT /protein_id="NP_791775.1" FT /db_xref="GI:28869156" FT /translation="MNPMLALRQYQKIGSQAQTSEASPHRLVQMLMEGGLDRIAQAKG FT AMARRDVASKGVFISKAIGIVGGLREGLDLDNAPSEALVRQDSLYHYMMTRLAEANAR FT NDQKMLDEVAGLLITVKEGWDAIATVQ" FT /colour=152 251 152 FT FLAGELLA 2138982..2139371 FT /gene="fliS" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1952" FT CDS 2139870..2141345 FT /gene="fleQ" FT /note="similar to GP:1100229; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="transcriptional regulator FleQ" FT /protein_id="NP_791777.1" FT /db_xref="GI:28869158" FT /translation="MWREIKILLIDDDSQRRRDLAVILNFLGEENLSCSSQDWQQVVG FT SLASTREVLCVLVGNVSAPGSLQGLLKTIAAWDEFLPVLLLSENSSVELPEDLRRRVL FT SALEMPPSYSKLLDSLHRAQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMM FT QQVADTDASVLILGESGTGKEVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGH FT EKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQ FT SIDVRIIAATHKNLENMIELGSFREDLYYRLNVFPIEMAPLRERVEDIPLLMNELISR FT MEHEKRGSIRFNSAAIMSLCRHAWPGNVRELANLVERMAIMHPYGVIGVAELPKKFRY FT VDDEDEQMVDSMRSDIEERVAINSNTPNFASGAMLPPEGLDLKDYLGGLEQGLIQQAL FT DDANGIVARAAERLRIRRTTLVEKMRKYGMSRREGDEQAED" FT /colour=152 251 152 FT FLAGELLA 2139870..2141345 FT /gene="fleQ" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1954" FT CDS 2141576..2142682 FT /gene="fleS" FT /codon_start=1 FT /transl_table=11 FT /product="sensor histidine kinase FleS" FT /protein_id="NP_791778.1" FT /db_xref="GI:28869159" FT /translation="MSAQLTDSYGLLEARVTELKGELADAGVQRLQELAEKERLANRL FT QNLLDLLPGGVIVIDGMGVVREANPAAIDLLGQPLLGMLWRHVISRCFAPREDDGHEV FT SLKDGRRLSIATRSLDAEPGQLVLLNDLTETRRLQEQLARHERLSSLGRMVASLAHQI FT RTPLSAAMIYASHLTEQELPVETQQRFAARLKDRLHELEHQVRDMLVFARGELPLTDR FT LTPGALFHALQNAAATHVQGVSVRWQCDSINGELLCNRDTLVGALLNLIENAVQASAG FT RTLLKVHAYSRGNVLRVCFSDNGSGMDKAALARIGEPFFTTKTTGTGLGLAVVTAVSR FT AHQGGVHYLSRVGRGTCAIVSLPLIPASSPTGTH" FT /colour=152 251 152 FT FLAGELLA 2141576..2142682 FT /gene="fleS" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1955" FT CDS 2142682..2144097 FT /gene="fleR" FT /codon_start=1 FT /transl_table=11 FT /product="sigma-54 dependent transcriptional FT regulator/response regulator FleR" FT /protein_id="NP_791779.1" FT /db_xref="GI:28869160" FT /translation="MPINVLLVEDDRSLREALGETLELAGYGYQAVGSAEEALVAAEA FT QPFSLVISDVNMPGMDGHQLLSLLRSRHPQLPVLLMTAHGAVDRAVDAMRQGAADYLV FT KPFEPKALIALVARHALGRLGPAESDGPIAVEPASIQLLNLASRVAKSDSTVLISGES FT GTGKEVLARFIHQNSPRADKPFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKF FT EQADGGTILLDEISEMPMGLQAKLLRVLQEREVERVGARKPITLDIRVVATTNRDLAG FT EVAAGRFREDLFYRLSVFPLAWQALRQRTADILPLAERLLAKHVNKMKHAPVRLSAQA FT QQCLVSYPWPGNVRELDNAVQRALILQQGGVIEAQDFCLAGPVTSLPVAVPSEAVPPQ FT PVISSAENAGVGVGAESAGALGDDLRRREFQMIIDTLRAERGRRKEAAERLGISPRTL FT RYKLAQMRDAGMDVEGYLFAT" FT /colour=152 251 152 FT FLAGELLA 2142682..2144097 FT /gene="fleR" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1956" FT CDS 2144312..2144668 FT /gene="fliE" FT /note="similar to SP:P25797; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar hook-basal body complex protein FliE" FT /protein_id="NP_791780.1" FT /db_xref="GI:28869161" FT /translation="MRALREKTSMSQGVEFNRLMLDMRAMQMDAMSAPKPVSGAQEAG FT ASSFADMLGQAVNKVAQTQQASSQLANAFEVGKSGIDLTDVMISSQKASVSFQALTQV FT RNKLVQAYQDIMQMPV" FT /colour=152 251 152 FT FLAGELLA 2144312..2144668 FT /gene="fliE" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1957" FT CDS 2144684..2146468 FT /gene="fliF" FT /note="similar to SP:P25798; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar M-ring protein FliF" FT /protein_id="NP_791781.1" FT /db_xref="GI:28869162" FT /translation="MAEATADTVPARAGASDKKPLFGLSFLENLSEMTMLRQIGLMVG FT LAASVAIGFAVVLWSQQPDYRPLYGSLAGMDSKQIMDTLTAANINYTVEPNSGALLVK FT SDDVQRARIQLAQAGVVQNDANIGFEILDKDQGLGTSQFMEATRYRRGLEGELARTIS FT ALNNVKGARVHLAIPKSSVFVRDDRKPSASVLVELYAGRSLEPSQVLAIINLVATSVP FT ELSKSQITVVDQKGTLLSDQAENSELTMAGKQFDYSRRMEGMLTQRVQNILQPILGND FT RYKAEVSAVVDFSAVESTAESFNPDQPALRSEQSVNEQRSSSSSTGGVPGALSNQPPG FT PATAPQNAAAGAAGAAGPIAPGQPLLDANGQQIMDPATGQPALAPYPADKRVQSTKNF FT ELDRSISHTKQQQGRLTRLSVAVVVDDMVKTNAANGEVSRAPWSAADLARFTRLVQDA FT VGFDASRGDSVSVINVPFSSERAEVLPEASFYSQPWFWDIVKQAVGVIFILILVFGVL FT RPVLNNITSGKSKELAGFGGDAELGGMGGLDGELSNDRVSLGGPQSILLPSPTEGYDA FT QLNAIKSLVAEDPGRVAQVVKEWINTDE" FT /colour=152 251 152 FT FLAGELLA 2144684..2146468 FT /gene="fliF" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1958" FT CDS 2146476..2147477 FT /gene="fliG" FT /note="similar to SP:P31067; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar motor switch protein FliG" FT /protein_id="NP_791782.1" FT /db_xref="GI:28869163" FT /translation="MVAKLSKVEKAAVLLLSLGETDAAQVLRHMGPKEVQKVGVAMAQ FT MRNVHREQVEEVMSEFVDIVGDQTSLGVGSDGYIRKMLTQALGEDKANGLIDRILLGG FT NTSGLDSLKWMEPRAVADVIRFEHPQIQAIVVAYLDADQAGEVLGHFDHKVRLDIILR FT VSSLNTVQPAALKELNQILEKQFSGNANTSRTTLGGIKRAADIMNFLDSSIEGALMDS FT IREVDEDLSVQIEDLMFVFNNLSDVDDRGIQALLREVSSDVLVLALKGSDEAIKEKIF FT KNMSKRAAELLRDDLEAKGPVRVSDVETAQKEILTIARRMAEAGEIVLGGKGGEEMI" FT /colour=152 251 152 FT FLAGELLA 2146476..2147477 FT /gene="fliG" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1959" FT CDS 2147493..2148311 FT /gene="PSPTO1960" FT /note="similar to GP:9947020, and SP:P31068; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar assembly protein Flih, putative" FT /protein_id="NP_791783.1" FT /db_xref="GI:28869164" FT /translation="MSSSNKESASDLIRAKDAGLLDIWALPSFDPHVEPEPEPEPEPV FT DEPAEMEEVPLDEVQPLTLEELESIRQEAWNEGFATGEKEGFHSTQLKVRQEAEVVLA FT AKVASLEQLMGHLLAPIAEQDTQIEKAVIHLVEHIARQVIQRELVTDSGQIASVLRDA FT LKLLPMGAQNLRIFINPQDFLLVKAMRERHEEAWKIVEDEDLLPGGCRIETEHSRIDA FT SVETRIALAISKMHDQLHEQVTHPAAADLSVDLDASPVSTAKTEDSDVDALDAP" FT /colour=152 251 152 FT FLAGELLA 2147493..2148311 FT /gene="PSPTO1960" FT /colour=152 251 152 FT CDS 2148301..2149659 FT /gene="fliI" FT /note="similar to SP:P52612; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellum-specific ATP synthase FliI" FT /protein_id="NP_791784.1" FT /db_xref="GI:28869165" FT /translation="MRLDRVSFGKRLAGYAESISLPAQPVVEGRLLRMVGLTLEAEGM FT RAAMGSRCMVINDDSHHPVEVEAEVMGFSGGKVFLMPVGSVAGIAPGARVVPLADTGR FT LPMGMSMLGRVLDGAGRPLDGRSPIKAEDWVPMDGPTINPLKRDPISQPLDVGIRCIN FT GLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEADIIVVGLIGERGREVKEFIEHILG FT EEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLTRFAQAQRE FT IALAIGEPPATKGYPPSVFARLPKLVERAGNAEKGGGSITAFYTVLSEGDDQQDPIAD FT SARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVSPEHMARAQHFKQLWSRYQ FT QTRDLISVGAYVAGGDRETDMAIALHPVLVRYQRQALRENESMQGSGDALASIFAPAP FT GG" FT /colour=152 251 152 FT FLAGELLA 2148301..2149659 FT /gene="fliI" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1961" FT CDS 2149666..2150115 FT /gene="PSPTO1962" FT /note="similar to SP:P52613; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar protein FliJ, putative" FT /protein_id="NP_791785.1" FT /db_xref="GI:28869166" FT /translation="MAQSRAARLAPVVEMAEAAERTAAQRLGHFQGQVNLANNKLQEL FT DQFRQDYQQQWLQRGSAGVSGQWLLGYQRFLSQLDVAVAQQYKSLEWHKANLDRARSA FT WQDCYARVEGLRKLVQRYMDEARRLEDKREQKLLDELSQRLPRHEQF" FT /colour=152 251 152 FT FLAGELLA 2149666..2150115 FT /gene="PSPTO1962" FT /colour=152 251 152 FT CDS 2152700..2154124 FT /gene="fliK" FT /note="similar to GP:5921668, and SP:P52614; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar hook-length control protein FliK" FT /protein_id="NP_791789.1" FT /db_xref="GI:28869170" FT /translation="MPLATNALLQTSTAATSRSSAATNAVKSADSSKDGASSFSNVYA FT KQARDTVAPRDDVPVKPSRDKTSPDKDKVAAGKDKPVNDQANAADKSTVADSGNDLPA FT ASSVAGNDSDTASADSTPDDAQADAAALADGQAVTDAALDPALDPALQALAVQTPGLP FT AARVQAPEVTTAPVIATLATTQAAPATAVVAEQAFNPDADPLDGLEAVQLALENASAR FT TQLAAQNAHAANKATPSNAEADPNQNLVNNLSALTEQPTADDSSTESSDKSFSGLIGE FT GLKDVKSAAGDTRVDNFADRLAALSQAAQPARAVAAPASAPLMNQPLAMHQSGWTEGI FT VDRVMYLSSQNLKTADIKLEPAELGRLDIRINMAPEQQTQVTFMSAHMGVRDALESQM FT SKLRESFVQQGLGNVDVNVSDQSQQQAQQQAQEQASRAQRSGRGNGVGSSDTSDDIAG FT VDAAIPVSQPAARVIGTSEIDYYA" FT /colour=152 251 152 FT FLAGELLA 2152700..2154124 FT /gene="fliK" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1966" FT CDS 2154679..2155182 FT /gene="PSPTO1968" FT /note="similar to SP:P06973; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar protein FliL, putative" FT /protein_id="NP_791791.1" FT /db_xref="GI:28869172" FT /translation="MAKSEEVVKDPAAKGKLKLIIIAVVALLLAVGLSVGATWFLMHK FT SESAPDPAAAAAAANVKPVAVFEPMTPAFVVNFNANGRQRYMQVSITMLGRNAADMEA FT LKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLRQKATASIQEVAQKELGKTVIEQLL FT FTNFVLQ" FT /colour=152 251 152 FT FLAGELLA 2154679..2155182 FT /gene="PSPTO1968" FT /colour=152 251 152 FT CDS 2155192..2156160 FT /gene="fliM" FT /note="similar to SP:P06974; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar motor switch protein FliM" FT /protein_id="NP_791792.1" FT /db_xref="GI:28869173" FT /translation="MAVQDLLSQDEIDALLHGVDDGMVQTDIASEPGSVKSYDLTSQD FT RIVRGRMPTLEMINERFARYTRISMFNLLRRSADVAVGGVQVMKFGEYVHSLYVPTSL FT NLAKIKPLRGTALFILDAKLVFKLVDNFFGGDGRHAKIEGREFTPTELRVVRMVLDQA FT FIDLKEAWQAIMEVNFEYINSEVNPAMANIVGPSEAVVISTFHIELDGGGGDLHVTMP FT YSMIEPIREMLDAGFQSDLDDQDERWVNALKEDVLDVNVPLTTTIAQRQLPLRDILHM FT RPGDVIPVELSDTLVLRANGVPSFKVKLGSHKGKMALQVIEPIARR" FT /colour=152 251 152 FT FLAGELLA 2155192..2156160 FT /gene="fliM" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1969" FT CDS 2156222..2156680 FT /gene="fliN" FT /note="similar to SP:P15070, GB:X74863, SP:P52954, FT PID:1617116, and PID:510998; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar motor switch protein FliN" FT /protein_id="NP_791793.1" FT /db_xref="GI:28869174" FT /translation="MADENDMTSAEDQALADEWAAALGEAGDSQADIDALLAADAGNS FT GSRMTMEEFGSVPKSAGPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQGSV FT IELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR" FT /colour=152 251 152 FT FLAGELLA 2156222..2156680 FT /gene="fliN" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1970" FT CDS 2156681..2157121 FT /gene="fliO" FT /note="similar to GP:5921672, and SP:Q51467; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar protein FliO" FT /protein_id="NP_791794.1" FT /db_xref="GI:28869175" FT /translation="MRRWLSVLLTVPSLAWAVEPVAQAAPAQVANTVSGGMGGQVMQL FT LFGLIVVVGLIFVLAWVMRRVQRVGPNNGQVIELVSTRALGPRDRLVLVQIGNEQVLL FT GITPGRITPLHVLKEPVHVPVREQTTPEFAQRLMELMGKDKDKK" FT /colour=152 251 152 FT FLAGELLA 2156681..2157121 FT /gene="fliO" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1971" FT CDS 2157121..2157873 FT /gene="fliP" FT /note="similar to SP:P33133; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar biosynthetic protein FliP" FT /protein_id="NP_791795.1" FT /db_xref="GI:28869176" FT /translation="MGALRFLILLMLAVVAPAALAADPLSIPAITLSNGADGQQEYSV FT SLQILLIMTALSFIPAFVMLMTSFTRIIIVFSILRQALGLQQTPSNQILTGMALFLTM FT FIMAPVFDRVNQDALQPYLAEKLTAQDAVAKAQVPIKDFMLAQTRTSDLELFMRLSKR FT TDIPTPDAAPLTILVPAFVISELKTAFQIGFMIFIPFLIIDLVVASVLMAMGMMMLSP FT LIISLPFKIMLFVLVDGWALIVGTLAGSFGGV" FT /colour=152 251 152 FT FLAGELLA 2157121..2157873 FT /gene="fliP" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1972" FT CDS 2157899..2158168 FT /gene="fliQ" FT /note="similar to GP:5921673, and SP:P33134; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar biosynthetic protein FliQ" FT /protein_id="NP_791796.1" FT /db_xref="GI:28869177" FT /translation="MTPEVAVDLFREALWLTTVLVAILVVPSLLCGLLVAMFQAATQI FT NEQTLSFLPRLLVMLVTLIVIGPWLLKIFMEYMLSLYTSIPTLIG" FT /colour=152 251 152 FT FLAGELLA 2157899..2158168 FT /gene="fliQ" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1973" FT CDS 2158184..2158960 FT /gene="fliR" FT /note="similar to GP:5921666, and SP:P33135; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar biosynthetic protein FliR" FT /protein_id="NP_791797.1" FT /db_xref="GI:28869178" FT /translation="MLALTDIQISTWVASFMLPMFRIVALLMTMPVIGTTLVPRRVRL FT YLAFAITVVVAPALPAMPPVQALDLSGLLLIGEQIIIGAGMGLSLQMFFHIFVIAGQI FT ISTQMGMGFASMVDPTNGVSSAVIGQFFTMLVTLLFLSMNGHLVALEILVESFTTMPV FT GGGLLVNNFWELANGLGWALSAGLRLVLPAVTALLIINIAFGVMTRAAPQLNIFSIGF FT PLTLVLGMVILWMTMGDILNQYQPIATQALQMLRDMVRAR" FT /colour=152 251 152 FT FLAGELLA 2158184..2158960 FT /gene="fliR" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1974" FT CDS 2158962..2160098 FT /gene="flhB" FT /note="similar to SP:P35538; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar biosynthetic protein FlhB" FT /protein_id="NP_791798.1" FT /db_xref="GI:28869179" FT /translation="MAENENGQDKTEDPTEKKVKDSRAEGQIARSKELTTLVVMLMGA FT GGLLMFGAGIAQMMSDLMRDNFTISRETIMDQSYMGKALLSSGLHALVVMLPFLIAML FT AAALVGPILLGGWLFSTKSLMPKFSRMNPAAGLKRMFSPHALVELLKSFGKFLIILAV FT ALVVLSKERNDLVAIAHEPLEQAMIHSLLVVGWSSFWMACGLMFIAAADVPFVLYEAH FT KKLLMTKQEVRDEHKNSEGSPEVKQRIRQLQREMSQRRMMASIPEADVIITNPTHFAV FT ALKYDPEQGGAPMLLAKGTDLVALKIREIGAHNQILILESAALARSIYYSTELDQEIP FT AGLYLAVAQVLAYVYQIRQFHSGQGKRPDPLGDVKIPPDLQRDA" FT /colour=152 251 152 FT FLAGELLA 2158962..2160098 FT /gene="flhB" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1975" FT CDS 2160485..2162614 FT /gene="flhA" FT /note="identified by match to PFAM protein family HMM FT PF03419" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar biosynthesis protein FlhA" FT /protein_id="NP_791799.1" FT /db_xref="GI:28869180" FT /translation="MDRSQLLSSARSNITGLGRGQLGVPLLLLIMLAMMMLPMPPFLL FT DVLFTFNIALSIVVLLVCVYALRPLDFSVFPTILLVATLLRLALNVASTRVVMLHGQD FT GHAAAGKVIQAFGEVVIGGNYVVGIVVFAILMIINFVVITKGAGRISEVSARFTLDAM FT PGKQMAIDADLNAGLIDQPEAKRRRAEVAQEAEFYGSMDGASKFVRGDAIAGLLILFI FT NLIGGMLVGIFQHNMTFADAGRVYTLLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEE FT MGKLINRQMFASPKALAVSAAIMIVMGLVPGMPHFSFISLGLVAAGGAYLLWKKDNQV FT KVEALAEVQRQQDLLPSPTRVQDSKELGWDDVTPIDIIGLEVGYRLIPLVDRNQGGQL FT LARIKGVRKKLSQELGFLMPTVHIRDNLDLAPSAYRLTLMGVILAEAEIYPDRELAIN FT PGQVFGTLNGITARDPAFGLEAVWIEISQRSQAQSLGYTVVDASTVVATHLNQILYKH FT SHELIGHEEVQQLMQLLSKSSPKLAEELVPGVLSLSSLLNVLQALLAEHVPVRDIRSI FT AEAIANNAGKSQDTAALVAAVRVGLSRAIVQSIVGVEPELPVITLEPRLEQILLNSLQ FT KAGQGQEEGVLLEPSMAEKLQRSLIEAAQRQEMQGLPVILLVAGPVRAMLSRFGRLAV FT PNMHVLAYQEIPDNKQVTIVATVGPNG" FT /colour=152 251 152 FT FLAGELLA 2160485..2162614 FT /gene="flhA" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1976" FT CDS 2162626..2163954 FT /gene="flhF" FT /note="similar to SP:Q01960; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar biosynthesis protein FlhF" FT /protein_id="NP_791800.1" FT /db_xref="GI:28869181" FT /translation="MQVKRFFAADMRQAMKLVRDELGAEAAIIGNRRIAGGVELTAAL FT DYKLSALAPRVPNMELEDELRKTQSRIVSAQAELNNRSDSDASINLQLFSGKPVSAAD FT THIEPTLEEPPRPFAYAPAPAAEPAGGQRAFDSMRSELNGLRELLEVQLGSLAWNQLQ FT GSRPQQANLWRRLQRVGLSGPLSRDLLSMIPDIDEPRQAWRMLLAHLARMIAVPDIEP FT LEEGGVIAMVGPAGMGKTTTLAKLAARYVLKYGPQNIALVSMDSFRIGAQEQLKTLGR FT ILNVPVTHVDPGQSLVQALEPLLRKRVVLIDTAGLQASDPALRMQLESLAGRGIKSRN FT YLVLATTSQKQVLTAAYHSYKRCGLAGCILTKLDETASLGEVLSLAISHELPVAYLTD FT GPRIPDDLHTPRRHQLVSRAVSVQMQDEPSEEAMADMFADLYHTPGKRVG" FT /colour=152 251 152 FT FLAGELLA 2162626..2163954 FT /gene="flhF" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1977" FT CDS 2164079..2164903 FT /gene="fleN" FT /note="identified by match to PFAM protein family HMM FT PF02374" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar synthesis regulator FleN" FT /protein_id="NP_791801.1" FT /db_xref="GI:28869182" FT /translation="MHPVQVIAVTGGKGGVGKTNVSVNLSLALAELGRRVMLLDADLG FT LANVDVLLGLTPKRTLADVIEGRCELRDVLLQGPGGVRIVPAASGTQSMVHLSPAQHA FT GLIQAFSEIGDNLDVLVIDTAAGIGESVVSFVRAAQEVLLVVCDEPTSITDAYALIKL FT LNRDYGMNRFRVLANMAQSPQEGRNLFAKLTKVTDRFLDVALQYVGAVPYDECVRKAV FT QKQRAVYEAFPRSKCALAFKAIAQKVDTWPLPANPRGHLEFFVERLVHQTSAGPVQ" FT /colour=152 251 152 FT FLAGELLA 2164079..2164903 FT /gene="fleN" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1978" FT CDS 2164900..2165640 FT /gene="fliA" FT /note="similar to GP:7677125; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="motility sigma factor FliA" FT /protein_id="AAO55497.1" FT /db_xref="GI:28852423" FT /translation="MTASGYQMYSKTSRNSQYELIERYAPLVKRIAYHLLARLPASVQ FT VEDLIQAGMIGLLEVSTKYDSTKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTR FT MVSDAIRAIEAKTGRDAKDHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGDHE FT GLHEDGASGSLEPSRDLEDERFQAALADAIANLPERERLVLALYYDEELNLKEIGEVL FT GVSESRVSQLHSQCAARLRGRLGEWRAR" FT /colour=152 251 152 FT FLAGELLA 2164900..2165640 FT /gene="fliA" FT /colour=152 251 152 FT /note="locus_tag: PSPTO1979" FT VR_#47 2187950..2202840 FT /colour=255 255 0 FT CDS 2191370..2192347 FT /gene="PSPTO2008" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55526.1" FT /db_xref="GI:28852452" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 2191370..2192347 FT /gene="PSPTO2008" FT /colour=178 58 238 FT CDS complement(2194390..2195367) FT /gene="PSPTO2010" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55528.1" FT /db_xref="GI:28852454" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(2194390..2195367) FT /gene="PSPTO2010" FT /colour=178 58 238 FT VR_#48 2247500..2266465 FT /colour=255 255 0 FT misc_feature 2252628..2264996 FT /note="PHAGE02; putative prophage; defective prophage FT region; no integrase found." FT /colour=178 58 238 FT CDS complement(2254666..2255499) FT /old_locus_tag="PSPTO2082" FT /codon_start=1 FT /locus_tag="PSPTO2082" FT /orf_name="PSPTO_2082" FT /product="Tail length tape meausure protein, internal FT deletion" FT /protein_id="AAO55600.1" FT /db_xref="HOGENOM:HBG305165" FT /db_xref="TIGR:PSPTO2082" FT /db_xref="UniParc:UPI0000008A5B" FT /db_xref="UniProtKB/TrEMBL:Q884K6" FT /transl_table=11 FT /translation="MALTSRLAIEVDSRSAQQKVDDLRRGLQALNDAGLRTGPIISGAG FT NAINGAGQNARSATAQVQSLERQVKSLGSAAAGMAGPLAAAFSAKAFYDAAEAYSTLTN FT RMKLVADRQLQQITEGTKPNKNAGKEKAYQEDAGTKMLDDARQRYAVLVAQSKELLNQD FT GTTKSIGAEQKKLVELETEIAQLKEKKTLTSSQKQVLAMAELNIAQQKQNASLEKEVEL FT RKLAAEETQKMISFQANLNSQLSKDQVGLNNSLAGQGMGDQARARLQEEFGIQEQ" FT /color=178 58 238 FT CDS complement(2254666..2255499) FT /old_locus_tag="PSPTO2082" FT /codon_start=1 FT /locus_tag="PSPTO2082" FT /orf_name="PSPTO_2082" FT /product="Tail length tape meausure protein, internal FT deletion" FT /protein_id="AAO55600.1" FT /db_xref="HOGENOM:HBG305165" FT /db_xref="TIGR:PSPTO2082" FT /db_xref="UniParc:UPI0000008A5B" FT /db_xref="UniProtKB/TrEMBL:Q884K6" FT /transl_table=11 FT /translation="MALTSRLAIEVDSRSAQQKVDDLRRGLQALNDAGLRTGPIISGAG FT NAINGAGQNARSATAQVQSLERQVKSLGSAAAGMAGPLAAAFSAKAFYDAAEAYSTLTN FT RMKLVADRQLQQITEGTKPNKNAGKEKAYQEDAGTKMLDDARQRYAVLVAQSKELLNQD FT GTTKSIGAEQKKLVELETEIAQLKEKKTLTSSQKQVLAMAELNIAQQKQNASLEKEVEL FT RKLAAEETQKMISFQANLNSQLSKDQVGLNNSLAGQGMGDQARARLQEEFGIQEQ" FT /color=178 58 238 FT CDS 2262447..2263874 FT /codon_start=1 FT /locus_tag="PSPTO2092" FT /orf_name="PSPTO_4038" FT /product="Tail fiber domain protein " FT /protein_id="AAO55610.1" FT /db_xref="HOGENOM:HBG491765" FT /db_xref="TIGR:PSPTO2092" FT /db_xref="TIGR:PSPTO4038" FT /db_xref="UniParc:UPI0000008A65" FT /db_xref="UniProtKB/TrEMBL:Q877M2" FT /transl_table=11 FT /translation="MPWYKTGTVSVTQNSNAVIGIGTAFIANSRVGDGFRGPDGGWYEV FT TNIASDTAMSISPNYQGATNGAGGYALAPLQGYVQASADALRALVLQYGQKLAALGTTG FT NYDILPIAKGGTGATDGATALVNLGLRGGANDLLVKSIGFRGTPVGYNIQGLYMGWNGN FT GDGGANYICNRGGAGGGHSWWSVNSDNTAAGPVMTYSYAGVLSVAQLSVTASPIAISSG FT GTSANTAAGARTNLGLGSAAIENTVPITKGGTGGTDGPSARSGIGLGTTDVATFRALEL FT THTTPWIDFHFNNTAADYDVRLINDSAGTLTLDGRLASKGTWCRTGLNGSRGANIYNLN FT WNTSNSGYVDVYIDASYVGALTLLQSDYRVKRQVEEFSAPFLERVNAYRIVTFKRAAYG FT EVFKDGENLIQGLIAHEVQEINPLAATGKKDDVDANGNIWIQQLDSIALITDAFGAIKE FT LSVQVKKLRAELDALKA" FT /colour=178 58 238 FT gene 2262447..2263874 FT /locus_tag="PSPTO_2092" FT /old_locus_tag="PSPTO2092" FT /colour=178 58 238 FT tRNA complement(2266664..2266753) FT /gene="tRNA-Ser-2" FT /product="tRNA-Ser" FT /note="codon recognized: UCC" FT promoter 2279883..2279915 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter complement(2304328..2304360) FT CDS 2307009..2307755 FT /gene="PSPTO2134" FT /note="Presumed to be involved in the biosynthesis of FT pyoverdine due to proximity to the rest of the pyoverdine FT biosynthetic gene cluster. Possibly acts to release the FT pyoverdine chromophore precursor from PvsA.; similar to FT GP:9948471; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine synthetase, thioesterase component" FT /protein_id="NP_791956.1" FT /db_xref="GI:28869337" FT /translation="MSLTLFCLPFSGASAMFYSPWRRKLPEWLNVRPLELPGRGMRMD FT EPLQADIVRLANHLADEISAELDKPYALFGHSLGGLLAFELVHALRERGLPAPLALFA FT SATAGPVRRDVSEYAVAKTDEQLIARLRTLKGTSENVIANQELMQLMLPILRADFLLC FT GSFVYGRREPLSVPIHVFGGKQDSVSVEQLLDWQEETCTGFSLDMFEGHHFYLVDEQA FT QLLRHLRRYCEQHLARWRNSASRQLSRAAG" FT /colour=255 165 0 FT sidero 2307009..2307755 FT /gene="PSPTO2134" FT /colour=255 165 0 FT CDS 2307860..2320870 FT /gene="pvsA" FT /note="This synthetase is the first component (of five) in FT the biosynthesis of the P. syringae pyoverdine peptide FT which is subsequently modified by various enzymes to FT produce the mature pyoverdine siderophore. This module FT initiates the chain and synthesizes the tripeptide FT L-glutamate:D-tyrosine:L-2-diaminobutyrate which is the FT constant feature of all pyoverdines and is subsequently FT converted to the fluorescent chromophore.; similar to FT GP:440169; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine chromophore precursor synthetase" FT /protein_id="NP_791957.1" FT /db_xref="GI:28869338" FT /translation="MDAFELPDTLAQALQRRASQTPDRLALRFLTDEKTQGLVLTYRD FT LDLRARTIAAALQSQAAPGDRAILLFHSGPDYVAAFFGCLYAGVIAVPAYPPESNRRH FT HQERLLSIIADAEPRLVLTASDVQPALLQMEELAAAGAPPLLCVDTLDSALADGWQGP FT QLQADHIAFLQYTSGSTALPKGVQVSHGNLVANELLIRHGFGIDVNPDDVIVSWLPLY FT HDMGLIGGLLQPIFSGVPCILMAPAYFLTRPLRWLEAISEYGGTISGGPDFAYQLCSA FT RVSDSALERLDLSRWRVAYSGSEPIREDSLNAFAEKFASCGFTPDSFMASYGLAEATL FT YVAGGKRGKGIPSLRLDTQALARNVAEPGDGQPVMSCGTGQPGHGVLIADPVTLHVLA FT ENSIGEVWASGPSIAHGYWRNPEASAKTFVQHDGQTWLRTGDLGFQRHGELYITGRLK FT DMLIVRGHNLYPQDIEKVIEREVDVVRKGRIAAFAVNQDGSEGIGIAAEISRSVQKIL FT PPEALIKLIRQTVAEAFQEAPSVVVLLNPGALPKTSSGKLQRSACRIRLADGSLDSYA FT VFPASGTTIQNHTSSTGSELQAQIASVWCEQLQCEQVSADDHFFLLGGNSIVATQVVA FT RLRETLGIDLNLRLLFEAPTLSAFAAQIEALQIAASQGNSQAQNAIVRLPGNEHLPQS FT LAQNRLWFLWQLDPQSSAYNIPGGLHLRGELDINALRSSFQRLIERHESLRTRFYEQD FT GVALQRIDAAGEFQLHSIDISELPGEERQARARAIREEQARLPFDLQNGPLLRVTLLQ FT LDEEEHQLLVTLHHIIADGWSLNVLIDEFSRLYASAVQGQTLELTPLPLRYADYGQWQ FT REWLAQGEAERQLDYWKQQLGDEQPTLTLSTDHSRSLRKQHSASRYSLRLSAELSAAL FT SNTAQAWQSTPFMLLLAGFQTLLHRYSGQTDIRIGVPGANRPRHETQGLIGFFINTLV FT LRAQLDPRLPFSTLLSQTRQAALDAQAHQDVPFEQLVEAFPQAREHGLFQVMFNHQQR FT DLSALRRLPGLLAEELPWHSREAKFDLQLHSEEDRNGRLNLSFDYADELFERDTIVRL FT ARHYVQLLTQVSQQAQVALGDLQLLNADELAEQAQWSAAACTPAQNWLPELLERQALQ FT TPERIALVWEGGSLDFASLHAQANRLAHYLRDKGVGPDIKVAIAAERSPQLLIGLLAI FT LKAGGAYVPLDPDYPTDRLAYMLQDSGVELLLTQSHLLGDLPSAEGVCTLAMDMLHLD FT NWPVSAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDETDVL FT MQKAPISFDVSVWECFWPLITGSRLLLAGPGEHRDPHRIAQLVNEYGVTTLHFVPPLL FT QLFIDEPLTQQCSSLRRLFSGGEALPSELRNRVLEQLPNVQLHNRYGPTETAINVTHW FT QCLRADGLRSPIGRPLGNVLCRVLDSELNPLPRGVAGELCIGGIGLARGYLNRPGLTA FT ERFIADPLGQPGERLYRTGDLVRWATDGALEYLGRLDQQVKLRGFRVEPQEIEARLLA FT QPGVGHAAVLVRETAAGPQLIGYYTAEAGQEVQAEHIKSALALELPDYMVPAQLVRLD FT SMPLSPSGKLDRRALPEPQWQTREHVEPHTDLQKQIAAVWRQVLGVPRVGLRDDFFEL FT GGHSLLATQIISRVRQACDIDLPLRALFEASELGAFAEQVQTLQQSGARNSLQPIARV FT DRSQPVPLSYSQQRMWFLWQMEPDSPAYNVGGMARLNGVFDIECFEAALQALILRHET FT LRTTFPSVNGVACQKVSGQTGLSVQWQDYYALPTEVRQQCIQALADSEAHQPFDLETG FT PLLRACLVRAAELEHYFVLTLHHIVTEGWAMDIFARELGLLYEAFLDGKPSPLEPLAV FT QYLDYSVWQRQWMEAGERQRQLDYWTAQLGNEHPLLELPCDRPRPPVQSHQGELYRFD FT LDPELAAKVRAFNARNGLTLFMTMTATLAVLLYRYSGQNDLRIGAPVANRIRPESEGL FT IGAFLNTQVLRVQLDGQMSVAQLFEQVRHTVIEGQSHQDLPFDHLVEALQPPRSAAYN FT PLFQVMCNVQRWEFQQSRDLAGMTVDYLVNDARATKFDLNLEVTELDHRLGCCLTYST FT DLFDEPRIAQMAEHWLNLLQALLVNPQQRLSELPLLQNAERQQLLDSLGVEAGEQRLD FT QCIHSLFAEQARLRPQAAALTFAGETLSYAELNARANQLAGMLRQRGVGPQVRVGLAL FT PRSLDMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGVGLLLSDRALFAALGELP FT AGVAHWCLEDDQPLLEAFSSDELPFISLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMH FT CQAVMRRFDMQPDDCELHFYSINFDAATERLLVPLLSGARVVLRAQGQWDAEEICTLI FT REQQVNILGFTPSYGSQLAQWLAIQGQTLPVRMCITGGEALTGEHLQRIRAVFQPELF FT FNAYGPTETVVMPLASLAPQQLEEGEASVPIGRIVGARVAYILDADLALVPQGASGEL FT YIGGAGLAQGYHQRPGMTAERFVADPFASNGGRLYRTGDLVRQRTDGLVEYLGRIDHQ FT VKIRGFRIELGEIESRLLEHESIREAVVLALDTPSGKQLAGYLVSEMAGQGDEQQAQL FT RESLKAHLKAQLPDYMVPTHLMLLASMPLTANGKLDRRALPAPGPELNRQHYIAPASE FT LEQQLAAIWCAVLNVEKVGLNDNFFELGGDSILSIQVVSRARQAGIHFSPRDLFQHQT FT VQTLAAVATTRELIQAEQGLLEGASALTPIQHWFFDTPIPQRQHWNQSLVLEPVSALD FT PRILEQALRAVLEQHDALRLSFTEQNGKWQAEHRAVTAETLLIQARVADMAECAALYA FT DTQRSLDLQNGPLLRALLVDGAQGQQRLLMVIHHLVVDGVSWRVLLDDLQTAYRQLSD FT VTPVRFAAKTSAFRDWAARLQAYAGNESLREELHVWQRQLGGPATNLPCHNSQGGQQN FT RHAQTVSVRLDAERTRQLLQQAPSAYRTQVNDLLLTALAQVVCRWSGQPSALIQLEGH FT GRETLFDDIDLTRTVGWFTSAYPLRLTPALAADAAPGDSIKAIKEQLRQVPHKGLGYG FT MLRYLADAASKAAMQALPVAPITFNYLGQFDQSFADDALFRPLEESAGAAHDPHAPLP FT NELSIDSQVYGGELLLRWTFSAERYQPAAIEALAQAYLNQLQALIAHCLSDGSGGLTP FT SDFPLADLDQTQLDALPVPATHIEDVYPLTPMQEGMLLHTLLEPGTGLYYMQDRYRIN FT SALDPERFAQAWQAVIARHEALRASFCWDIGETMLQVIHKPGSTPIDYLDWRDVLADE FT QEPRLQALLKSEREAGFDLLNQPPFHLRLIRVDEARYWFMMSNHHILIDAWCRSLLMN FT DFFDIYTALGEGREAQLTPAPRYRDYIGWLQRRGLVQARDWWQHNLRGFERPTPIPSD FT RPFLREHAGDSGGMVVGDCYTRLDERDGAQLRELAQQHQLTVNTFAQAAWALTLRRMS FT GDRDVVFGVTVAGRPVELPQMQRTVGLFINTIALRVGMPGDEQRCTVRDWLSQLLDSN FT MQLREYEYLPLVTIQENSELPKGQPLFDSLFVFENAPVEVSVLDRAQSLNATSDSGRT FT HTNYPLTAVCYPGDDLGLHLSYDQRYFDESTVQSMLDEFKRLLLALIEGFHGDMAGLA FT LVSEQERTFLIEGCNQSDHAYPLDKSYVELFEAQVEAHPERIAVSCLDRQLGYAELNI FT ASNRLGHALIEAGVGFDQPVALLAERGPELLGMIIGSFKAGAGYLPLDPALPNVRLSG FT IIAQSRTPVLVCSAQCLDQGRALLEVLPESHRPQLRVWEDVQQSESAQHNPGRYSAAD FT NLAYVIFTSGSTGLPKGVMVEQRGMLNNQLSKVPYLNLRDSDVIAQTASQSFDISVWQ FT FLAAPLFGARVDIVPNDIARDPQALLAHVQAQRISVLESVPSLITGLLAEQHATLDSL FT RWLLPTGEAMPPELASQWLQRYPAIGLVNAYGPAECSDDVAFFRVDADSTRSAYLPIG FT SPTDNNRLYLLDDALDLVPLGAVGELCVAGAGVGRGYVADPSRTVPVFVPHPFGAPGE FT RLYRTGDLARRRKDGVLEYVGRVDHQVKIRGYRIELGEIETRLLEHPAIRESVVLDID FT GPLGKVLAAYLVPSAATQDHDALRDALKSHLKASLPDYMVPAHLVILDAMPLTPNGKL FT DRKALPAPDVSQAQQEYLAPQTEMEQQLATIWADVLKVERVGITDNFFELGGHSLLAT FT QVVTRAQKLLQRNVPLRAMFEFNTVQALAEHLESLGGAQVDEQKFDRLADLMAELEGF FT " FT /colour=255 165 0 FT sidero 2307860..2320870 FT /gene="pvsA" FT /colour=255 165 0 FT /note="locus_tag: PSPTO2135" FT CDS 2329386..2330363 FT /gene="PSPTO2146" FT /note="Present adjacent to pyoverdine biosynthetic genes; FT similar to GP:1890776; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine biosynthesis regulatory gene, FT putative" FT /protein_id="NP_791968.1" FT /db_xref="GI:28869349" FT /translation="MSHALSLDIRPLLAGAGTLPMLVQAPEPGLDLMEALGELKPLVA FT EHLYSAGGILFRGFEVGGAEAFREFAAGFGDPLLNYEFGSTPRSNVTKGVYTSTEYPA FT HQSIPLHNEQAYTLDWPMKIWFYSMIAAQTGGETPIADSREIYRRIPARIRDRFIEKK FT LMYVRNYGNGLDVEWSQVFNTEDERVVEAYCQAHNIECEWKDDGELRTRQICQAVSRH FT PVTQDTVWFNQAHLFHISNLQPEVRETLLDVVDEEDLPRNVYYGDGSPIEETLLDEIR FT GVLDDCTVSFPWLENDVLMLDNMLTAHSRAPFTGKRKVVVAMAQGHSDK" FT /colour=255 165 0 FT sidero 2329386..2330363 FT /gene="PSPTO2146" FT /colour=255 165 0 FT CDS 2330649..2333963 FT /gene="PSPTO2147" FT /note="This synthetase is the second module (of five) in FT the biosynthesis of the P. syringae pyoverdine peptide FT which is subsequently modified by various enzymes to FT produce the mature pyoverdine siderophore.; identified by FT match to TIGR protein family HMM TIGR01734" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine sidechain peptide synthetase I, FT epsilon-Lys module" FT /protein_id="NP_791969.1" FT /db_xref="GI:28869350" FT /translation="MDFALFPIPSCAGLAERDGLSYAQQRMWFLWQLDPHSAAYNLPM FT SVCLNGPLELPLLERAFSALVERHESLRTTFGQEGDRTFQRVAPPAPVNIRLIDLSPL FT PPQQRWSNARQAMAEQSAQTFDLQRGPLFTVQVLRLAEQEHLLLLNLHHMITDGWSMN FT VLIDEWLRGYDALLGGKPLPFQPLAVQYRDYAVWQRSWLEAGEQERQLDYWRKHLGEE FT HPVLELPTDRPYPALPSHEGARLELALAPELLRNLKILAQRQGVTLFVVLLATFKSLL FT HRYSGQTDIRVGGLIANRTRSETEGLIGCFINTQVLRSEVTAQTRFVDLLHTVRDAST FT GAQAHQELPFDAIIDALQPERSQSHNPLFQVMFNHQPVVADLLDKQLSGGLRVANLSA FT EQQALAQRSHAAASDLMLATSGEGEQLNAAFTYATDIFDQPTIARLAAHWRNLLTSVC FT ADPLQTIAELSMLSADERTHLLAVDSAIKADTTTPAHRQFEAQVQRTPDALALILAGE FT SPSPSLTYCELNERSNRLAWQLREQGVGPDVLVGVALGRSLDMPVALLAVLKAGGAYV FT PLDLSAPSERLRHVLQDSGLKRLLTHSEQRPTLPELAGIQCLCIDQMNSEAASAENPV FT VDIDPAHLAYVIYTSGSTGRPKGVAISHGALAEFVTLGADYSDLREGDRVLQFATQSF FT DGFVEQFYPPLCRGAAVVLRDERLWDSATFHHAIVEHGVTLADLPAAYWLTLVQDFAA FT SPPVHYGALRQIHVGGEAMAVEGLRLWQHAGLGHVRLLNTYGPTEATVVSSIHDCSAL FT TPEQVSWRGVPIGKGLAGRRLYVLDDQLNLLPQGALGELYIGGPGLARGYHAQPGLSA FT ERFVADPFVAGERLYRTGDRARLRADGAIEYIGRVDHQVKIRGFRIELGEIESRLQQC FT TGVREAVVLAVALAGSAQLVAYVVPSVVANSDTEQMALRRRIKGQLQASLPDYMVPTH FT LLLLAQLPLTPSGKLDRKALPAPDSSQLQARYRAPHSEVEICLAAIWQEVLHAQQVGL FT DDHFFELGGHSLLAAQVIARIKTRLGVSLPLRVLFEKPLLGELAAEVALLTDNATDND FT WSDMDQFMDSLEEFGA" FT /colour=255 165 0 FT sidero 2330649..2333963 FT /gene="PSPTO2147" FT /colour=255 165 0 FT CDS 2333960..2341837 FT /gene="PSPTO2148" FT /note="This synthetase is the third module (of five) in FT the biosynthesis of the P. syringae pyoverdine peptide FT which is subsequently modified by various enzymes to FT produce the mature pyoverdine siderophore.; identified by FT match to TIGR protein family HMM TIGR01734" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine sidechain peptide synthetase II, FT D-Asp-L-Thr component" FT /protein_id="NP_791970.1" FT /db_xref="GI:28869351" FT /translation="MTATTAARIAKRFVGLSLEQRQQFLTRLRQEGKDFSLLPVPVSR FT HDFSAIPLSFAQQRLLFLWQLDPLSDAYKMTTGLRLQGPLNESALRRAFDHLIERHEV FT LRTVFQTDGDQALQVLLHNQSIALDSIDLSVLADSELRDAELALQVTTLTSQPFDLRT FT GPLLRAHLFRLASDEHVLVVNMHHIVSDGWSMDVMIQEFVHCYQAYVEGREPSLPALP FT LQYADYAIWQRRWLEAGEGERQLDYWRGQLGDEQPLLDAAQDFPRPVTQSFQGEHLRF FT DFGAELSHQLNTFARTQGMSLFMLVLAGFSLFLSRKAGQRDIRIGVPNANRGRAETEG FT LIGFFINTQVLRCQIDERLSYLDLLAQIRDTSFGAQAHQDVPFEQLVDHLAPERNLGH FT NPLFQAKFNQNVVLKQKTALKLAGLEVSEYAFEKQGAHFDLALDITDDGTLIHGDMTY FT ASDLYRRATVEGFIPELLDLFKTLLNAPDVPLFSLGALAVELPREVREPAPQVLQLWD FT RQVESQPDALAARCLDRTLSTRELDQAANQLAHHLIGLGVREGQPVAVLMERSLDWLT FT AVLAIFKAGGVYMPLDVKAPDARLQQMLSNAQTKVLLCAEGDRRETSLNVAGCQGLAW FT TPALWQSLPTSRPDIELPADSAAYVIHTSGSTGQPKGVVVSQGALASYVRGLLEQLQL FT APEVSMALVSTIAADLGHTVLFGALCSGRTLHVLTESLGFDPDAFATYMAEHQIGVLK FT IVPGHLAALLQAAQPADVLPQHALIVGGEACSPALVEQVRQLKPGCRVINHYGPSETT FT VGVLTHEVPALSELNAIPQVSRFPQCSAHSGDPLRSVPVGAPLPGASAYVLDDVLNPV FT ATQVAGELYIGGDSVALGYLGQPALTAERFVPDPFAQDGARVYRSGDRMRHNHQGLLE FT FIGRADDQVKVRGYRVEPAEVAQVLLSLPSVAQVSVLALPVDEDESRLQLVAYCVAAA FT AASLTVDSLREQLTARLPDYMVPAQILLLDQLPLTANGKLDKRALPKPGVVKQRYTAP FT VGEIEEKLAAVWADVLKLEQVGSTDNFFELGGDSILSLQIIARAKRQGIKLSPKQLFE FT KQTIGQLASVARLIEKKPAAAAEQVSGSLPLLPIQARFFEMDIPERQHWNQALMLKPL FT QTLDVTHLQAALTALIEQHDALRLGFTQQNGQWQATFGALNTRDLLWVHELDSPERLT FT ELANEAQRSLDLKNGPLLRAVLVNLPHGEQRLLLVIHHLAVDGVSWRVLLEDLQQAYV FT ALTKGQPVALAAKTTSLKRWAEQLQQYATGAVLTAERDYWLRALQGDDQPLPRDKPEG FT SMRTRDAAHASSWLSKDLTHKLLKVAPAAYRTQVNDLLLTALAQVLCEWSQQPSVLVQ FT LEGHGREDLFDDTDLSRTVGWFSSLFPVRLTPHIAPGASLCGIKEQLRAVPNKGIGYG FT VLRHMADSTFAQPLAALPQARVTFNYLGQFDGTFNEQQGALFVPSADSVGIALCEDGP FT LGNWLSLNGQVFDGQLQLDWTFSREVYQASTIDTLARRYEQALTTLIEHCIAGHQGVT FT PSDFPLAHLTQAQLDALPIAAGEIEDIYPLSPMQQGMLFHSLFDSGAGNYINQMRVNI FT SGLDVPRFHNAWQSAVNNHEVLRSCFVSQSEQSLQVVQSQVTLPFVELDARGKPQNWL FT DDWAQADRQQGFDLAQGPLLRLAVLRTADDRWQLIYTSHHILMDGWSSSRLLGEVLQR FT YSGQMPPKQAGRYRDYIQWLQDQDADVSERFWTAELAELDEPSRLLQAFKTSTDQQGY FT GDYIQLIDADGTRRLNEFAREQHVTLNTLVQSAWLLLLQRYTGQSSVTFGATVAGRPA FT ELSGVEEQLGLFINTLPVIASPRSEQTVGDWVQQVQAKNIALREHEHTPLYTIQRLAR FT HSGEALFDNILVFENYPVSEALQRAPDGLVFSDLRNQEQAHYPLTLVVEANDVLSVRF FT SYDRQHFSAEGILQLAAHFDHLLQSLSASATARLGELALPAVWTQTVQRYPSEHCAHQ FT RIEAQAARTPQAIALSLGAEQLSYQQLNRRANQLAHKLREQGVGPDVRVGLAAERSLE FT MIVGMLAILKAGGAYVPLDPDYPQDRLSFLMQDSGIELLLSQTQLLGQLPIPAHVQTL FT DLADALDGYSTENPINQTSPDNLAYVIYTSGSTGKPKGTLLAHHNLMRLFAATDDWFK FT FNEKDVWTLFHSFAFDFSVWEIFGALLHGGRLVIVPCEVTRSPEEFHALLVDQQVTVL FT NQTPSAFKQLMRVACDSTSVLSLETIIFGGEALDVASLKPWFARFGDQTPRLINMYGI FT TETTVHVTYRPITLADTHNPASPIGEAIADLSWYVLDADFNTVAQGCSGELHIGHAGL FT ARGYHNRAALTAERFVPDPFANDGGRLYRTGDLARYKTAGTIEYAGRIDHQVKIRGFR FT IELGEIEARLQAHSAVREVIVLAVDGQLAAYLLPAQPDQDQQALRGTLKAELRANLPD FT YMVPTHFIFLDKLPLTANGKLDRKALPAPDAGQLQAAYVAPQGELEEQLASVWSAVLK FT VEQVGRSDNFFELGGHSLLAVQMLVRVREQLQREVGLKDLFEQPVLADFCAALQEKNG FT ESDHALDELTKSLEALKRLSAEEIDNLIA" FT /colour=255 165 0 FT sidero 2333960..2341837 FT /gene="PSPTO2148" FT /colour=255 165 0 FT CDS 2341852..2348307 FT /gene="PSPTO2149" FT /note="This synthetase is the fourth module (of five) in FT the biosynthesis of the P. syringae pyoverdine peptide FT which is subsequently modified by various enzymes to FT produce the mature pyoverdine siderophore.; similar to FT GP:13094061; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine sidechain peptide synthetase III, FT L-Thr-L-Ser component" FT /protein_id="NP_791971.1" FT /db_xref="GI:28869352" FT /translation="MQQLLDSVKSLSARERKALAILLKRQGVNLYGVTPIARRETPAA FT SALSYAQQRQWIIWQLEPHSAAYNIPLALRLHGALDVEALRRSVEQLIERHETLRTTF FT EQQGDEALQVVHPASPFALNVDQLALGETVESYVDLEVQRPFDLQHGPLLRVRLLELS FT EQEHVLVLTQHHIVSDGWSMPIMVDELMQCYQAASLGREAELAQLPIQYADYAIWQRN FT WLEMGEQERQLAYWTQQLGDQQPILELPTDRPRPALRSYDGARLNIELDAALLNTLKA FT LARQQGITLFMLLLASLQTLLHRYSGQADIRVGVPVANRTRSETQGLIGFFVNTQVLK FT AEFGAQTTVADLLQQIKQTAVQAQAHQDLPFEQLVEALQPQRDLSRSPLFQVAYNHQS FT EGYNEARELAGLRLEYQVSDKHTAQFDLTLDTCERQNGLAASLTYATDLFDATTIERM FT AGHWRNLLSGMCRDANQRIADLPLLSVEERQNTLRDWNHKLAVYPTEQCAHQRIETQA FT ERTPQAIALSLGAEQLSYQQLNSRANQLAHKLREQGVGPDVRVGLAAERSLEMIVGML FT AILKAGGAYVPLDPDYPQDRLSFLMQDSGIELLLTQTQLLGQLPIPAHVQTLDLADAL FT DGYSTENPINQTSPDNLAYVIYTSGSTGKPKGTLLAHHNLMRLFAATDDWFKFNEKDV FT WTLFHSFAFDFSVWEIFGALLHGGRLVIVPREVTRSPEEFHALLVDQQVTVLNQTPSA FT FKQLMRVACDSPVPMSLQKVIFGGEALDVASLKPWFARFGDQMPRLINMYGITETTVH FT VTYRPITLADTHNPASPIGEAIADLSWYVLDADFNPVAQGCSGELHIGHAGLARGYHH FT RAALTAERFVPDPFSNDGGRLYRTGDLARYKTAGTIEYAGRIDHQVKIRGFRIELGEI FT EARLQAHSAVREVIVLAVDGQLAAYLLPAQPDQDQQALRETLKAELRANLPDYMVPTH FT FIFLDKLPLTANGKLDRKALPAPDASQLQAAYVAPQGELEQQLAAIWADVLKVGQVGR FT SDNFFELGGHSLLATQVISRIRQQLDVELSLRDLFEARDLAAFAQAAGAGQGNDAPRF FT IKADRNQPLGLSYAQQRQWFLWQLDPESTAYTIPAALRLSGSLDIAALEHSFSALIAR FT HETLRTTFRQQGEQAVQIIHAPRALTLTVESVPAGQTLEACVEQEMQRPFDLEQGPLL FT RVRLLNLAADEHVLILTQHHIVSDGWSMPIMVDELVRLYEGYSQGREVLLAELDMQYA FT DYALWQRSWMDAGEQARQLAYWKQQLGDQQPILELPADHPRPVVQSHVGARLAVELAP FT ALIDDLKQVARQQGVTLFMLLLASFQTLLHRHSGQLDIRVGVPIANRTRAETEGLIGF FT FVNTQVLRAEFDLHTTFSELLQQVKHTALQAQAHQELPFEQLVEALQPQRSLSHSPLF FT QVMFNHQSQASAEVRALPGLQVEALVSESYPAQFDLTLNTAEQNGGLSAALTYATALF FT ERSTIERMAGHWLALLQAICANAGQRIADVPMLDAAEQQQIVREWNATAAQFPSELCL FT HSLIEAQVLATPNAPALIFADEQLSYTQLNARANQLAHRLREAGVGPDVLVGICVERS FT LELVIGLLAIIKAGGAYVPLDPDYPEDRLAYMMQDSGIGLLLTQTSLLERLPVQVQSM FT CLDQDGDWLEGYSTANPVNLSHPQNLAYVIYTSGSTGKPKGAGNSHRALVNRLHWMQK FT AYALDDSDTVLQKTPFSFDVSVWEFFWPLLTGARLAVALPGDHRDPERLVQTIRQHEV FT TTLHFVPSMLQAFMTHPQVESCNSLSRVMCSGEALPAELVGQVLKRLPQVGLFNLYGP FT TEAAIDVTHWTCTTDDVLSVPIGRPIDNLKTHILDDGLLPAAQGVAAELYLGGVGLAR FT GYHNRAALTAERFVPDPFDGQGGRLYRTGDLARYRDEGVIEYAGRIDHQVKIRGLRIE FT LGEIEACLLEHDSVQEAVVIDVDGPSGKQLAAYLVVEQRSDHLRELLKAHLKASLPDY FT MVPTHFIVLDSMPLTANGKLDRRALPAPDATQLQRQYVAPVSEQEQQMAAIWADVLKV FT ERVGLSDDFFELGGHSLLATQLISRIHTGLGIDIPLRLIFEKPQLNEFIQAFASSGLS FT LTEDGLSDIEKMMNEMAGI" FT /colour=255 165 0 FT sidero 2341852..2348307 FT /gene="PSPTO2149" FT /colour=255 165 0 FT CDS 2348309..2356936 FT /gene="PSPTO2150" FT /note="This synthetase is the fifth module (of five) in FT the biosynthesis of the P. syringae pyoverdine peptide FT which is subsequently modified by various enzymes to FT produce the mature pyoverdine siderophore. This module FT terminates the peptide chain with a thioesterase domain at FT the C-terminus.; identified by match to PFAM protein FT family HMM PF02875" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine sidechain peptide synthetase IV, FT D-Asp-L-Ser component" FT /protein_id="NP_791972.1" FT /db_xref="GI:28869353" FT /translation="MDKSAAERIAQRFTGLPVEQRRQILAKMHETGQSFKLLPIAVTR FT HGAARIPLSYAQQRMLFLWQMEPDTAAYNVPMAVRLSGPLDRQALSAALDQLVQRHET FT LRTRFVSEDGAFYQEILQQATVALEFASVEPADIADQVRAELHKPFDLLSGTLLRVKL FT FQLGDTEHVLTVCMHHIVSDGWSGEVLIRECVQLYQAQVSGQPAQLPALAIQYADYAI FT WQRAWLEAGEGERQLEYWKQQLGSEHPLLSLPLDHERPLQPSQRGATVRVDLPEHLSA FT QLKTQARNSGQTLFMLMLAALSVVLSRFSGQADIRIGAPNAGRTRSELEGLIGFFINT FT QVLRVQVDERQSFAQLLDQVKQVVTGAQSHQELPFEHLVDALAPERNLGHNPLFQFKI FT NQHVLAAEDSGQRVSGLTVDEFPMGSSDARFDLAFDFTDTPGGIRGYFTYATDLFEPP FT TIERMANALRAVLQALVADTDQRLADQPQTVSLPAAEQSADFACRDFLSLWQQGLHIG FT RGKTALRVGQQTLSFDELEQRSNQFARYLHTQDIQPGMAVALCLDRSVEWVVSLLAVL FT KLGAVYLPLDSAQPAERLQQLTRDSGAALLIHASGDDKAAQLGVCPVLAFDAALWSEV FT DGGELSVRIIAEQPAYIIYTSGSTGQPKGVVISHGALANYVQGVLARLSLNDGASMAM FT VSTVAADLGHTLLFGALASGRPLHLLSHEQAFDPDGFARYMAEHQVEVLKIVPSHLQG FT LLQAAHPADVLPSQLLMLGGEASSWALIEQVRALKPGCRIVNHYGPTETTVGILTHEV FT AERLNACRSVPVGQPLANCKARVLDAYLNPVAERVSGELYLGGQGLAQGYLGRAAMTA FT ERFVPDPDADGQRLYRAGDRARWVDGVLEYLGRADDQVKIRGYRVEPGEVGQVLQTLE FT NVAEAVVLAQPLESDETRLQLVAYCVAAVGVRLNVESLREQLAARLPEYLVPAQFMLL FT EKLPLTANGKLDKRALPKPGVVKQRYTAPVGEIEEKLAAVWADVLKLEQVGSTDNFFE FT LGGDSILSLQIIARAKRQGIKLSPKQLFEKQTIGQLASVARLIEKKPAAAAEQVSGSL FT PLLPIQARFFEKDIPERQHWNQALMLKPLQTLDAIPLQAALTALIEQHDALRLGFTQQ FT NGQWQAAFGALNTRDVLWTHELDSVERLSELADEAQRSLDLKNGPLLRAVLIDLPQGE FT QRLLLVIHHVAVDGVSWRVLLEDLQQAYVAIVAGRPLSLPAKTSSLKSWAEHLQAYAQ FT SPALEQELGYWQAQLQEVSDALPCDYPHGGQQQKHALSVATQLNGELTRQLLQDAPAA FT YRTQINDLLLTALARVVSRWTAQPHALIRLEGHGREDLFDALDITRTVGWFSNLYPVR FT LTPQATLAESIMTIKEQLRAVPDKGIGYGALRYLGSESARRTLQALPQGSIVFNYLGQ FT FDGSFDAQGALFTPSADSSGASQSADAPLAAPLSLNGQVYGGQLRLSWTFSGAVFERD FT TVQRLADEYAVELQQLIAHCTTEGVAGVTPSDFPLARLTQSQLSRLPMPAAQIEDIYP FT LAPMQQGMLFHTLFEQEAGNYINQMRVEVSGLDVPRFRAAWQATLDAQEVLRSGFVSH FT LEQSLQVVLRDVSMPFVERDARGQASEWVDDWANADRQQGFDLTQGPLLRLAVLRTGE FT QTHQLIYTSHHILMDGWSSSRLLGEVLQRYSGQTLPRQVSRYRDYIEWLQRQDAALSE FT RFWTGQLAGLDEPTRLVQAFKAPENGQGHGDYLQLIDAENTRQLSEFAREQRVTLNTL FT VQSAWLLVLQRYTGQSSVTFGATVAGRPAELPGVEEQLGLFINTLPVIASPRPEQRVA FT DWVQQVQAKNIALREHEHTPLYDIQRWARSAGEALFDNILVFENYPVSEALQQSAPQG FT LVFGGLHTQEQTHYPLTLVVNLGETLSMRFSYARQSFSELHMAQLSAHLRQVLQALAR FT DPQAAIGELALLDDHQQQQVLRSWNTTTADFPNEHCLHSLIEAQVLATPNAPALIFAA FT EQLSYAQLNALANQLAHRLREAGVGPDVLVGICVERSLELVIGLLAIIKAGGAYVPLD FT PDYPEDRLAYMMQDSGIGLLLTQTSLLECLPVPEHVQSICLDQDGDWLAGYSTANPVN FT LSHPQNLAYVIYTSGSTGKPKGAGNSHRALVNRLHWMQKAYALDGSDTVLQKTPFSFD FT VSVWEFFWPLLTGARLAVALPGDHRDPERLVQTIQEHQIRTLHFVPSMLQAFLTHPQV FT ESCNSLRRVVCSGEALPAELAGQVLKRLPQASLYNLYGPTEAAIDVTHWTCTTDDVLS FT VPIGRPIDNLKTHILDDGLLPAAQGVAAELYLGGVGLARGYHNRAALTAERFVPDPFD FT EQGGRLYRTGDLARYRNEGVIEYAGRIDHQVKIRGLRIELGEIEARLHEHAGVREANV FT IDIDGPSGKQLVAYLVLADLDQGPDVLREALKTHLKAHVPDYMVPTWFVFIDVMPLTA FT NGKLDRRALPKPDVSRSQQGYVAPRTEFEQRLAALWQQVLQVEQVGLNDNFFALGGHS FT LLAVSLAGRIRETFDISIKLHDFLLMQTLGELADFMRADEARVKSAVIAMNANQSGAA FT PLICLPPGGGGTYSYYPLAGQLSDSRPVYGLVNKAYVVPGWFDTSWQEMVAYYVEQIR FT TTQPQGPYNLLGWSMGGALAIEVAHVLEREGDTVSFLGLVDTQLPASLAMEWVEEAPE FT VTTQKQGENYYRSLIKSLQAFVPGLQEASIVGLIDTARHSVASEGEVIDWVVDEVAQQ FT AGMNADNLRSIFQDIAVQDEIETGYKLLEANAQLSQAFTLKKLNVQADCWWAGQSRAP FT GQIAKAETVLLEQCSVNGLRSSTTVDQRHDNVVLAEAFLQGLAERLA" FT /colour=255 165 0 FT sidero 2348309..2356936 FT /gene="PSPTO2150" FT /colour=255 165 0 FT promoter complement(2354845..2354877) FT CDS complement(2362311..2363975) FT /gene="pvdE" FT /note="similar to GP:466460, GB:X06325, SP:P09002, and FT PID:1333690; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="pyoverdine ABC transporter, ATP-binding/permease FT protein" FT /protein_id="NP_791975.1" FT /db_xref="GI:28869356" FT /translation="MTRKTESLARETLRILKPFWWLVALSTVLGIVSGLSVTGLLATI FT NNALNMPGGPDTHTALLFAGLCVLTLACATLSNLSTNYVGQRVVANLRRELAAKVLVA FT PIEQLERYRSHRLIPVLLNDVNTLSTFALSVAPMVISFTVTLGCLTYLALLSWQILAL FT TVLTVVLGTGAQYLAHAFGMRSILAARNSEDELQKHYQALSAGAKELRIQRKRRQHML FT DEKIHGATENICRSNIRAANIFVSAETFGSMLFFAVIGMAIAFQAMWPTTEKTVLGGF FT VLVMLYMKGPLERLITALPGISRAQIAMRRIAELSWKFSSPEPHLLVSDRPNSLANMQ FT TLELHNLRYDYPPVEGSDAFHLGPVDLSIKQGDIVFIVGENGCGKTTLIKLLLGLYTP FT QQGEIHLNGQAVTPENLDDYRQLFTTIFADYYLFDEPLQGEAALPQDAGKYLERLDIA FT HKVSIQDGAFTTTDLSTGQRKRLALINAWLDERQVLVFDEWAADQDPAFRRVFYTELL FT PELKQQGKTIIVISHDDRYFYIADQLVRMQAGRIEVEQAQSQAAQA" FT /colour=255 165 0 FT sidero complement(2362311..2363975) FT /gene="pvdE" FT /colour=255 165 0 FT /note="locus_tag: PSPTO2153" FT promoter complement(2377712..2377744) FT promoter complement(2377712..2377744) FT VR_#50 2380000..2387500 FT /colour=255 255 0 FT misc_feature 2380999..2381122 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="2.6e-09" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=28.500000 FT CDS complement(2381162..2382529) FT /codon_start=1 FT /locus_tag="PSPTO2165" FT /orf_name="PSPTO_3326" FT /product="Group II intron, maturase " FT /function="RNA binding" FT /function="RNA-directed DNA polymerase activity " FT /biological_process="RNA-dependent DNA replication " FT /protein_id="AAO55682.1" FT /db_xref="GO:0003723" FT /db_xref="GO:0003964" FT /db_xref="GO:0006278" FT /db_xref="HOGENOM:HBG244542" FT /db_xref="InterPro:IPR000123" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR013597" FT /db_xref="TIGR:PSPTO2165" FT /db_xref="TIGR:PSPTO3326" FT /db_xref="UniParc:UPI0000008AAC" FT /db_xref="UniProtKB/TrEMBL:Q877J2" FT /transl_table=11 FT /translation="MTIQQAMHQMPGKPGRDAIAEGETPRKASSDEAGCPRNDSTPTGS FT GLLQAALTRDNLQLAFKQVRANKGAAGVDGLGIVETAEHLKTAWPGIRAQLLAGTYRPD FT PVRRVLIPKPGGGERKLGIPTVTDRLIQQALLQVLQPLLDPDFSNHSYGFRPERSAHQA FT VLAAQQYIHSGRQIVVDVDLEQFFDCVEHDVLIARLGRKVKDRDVLRLIRAYLNSGALI FT EGMVMTSTRGTPQGGPLSPLLANVVLDEVDKELERRGHCFVRYADDANVYVRSPKAGQR FT VMALLRRLYGRLGLRVNESKSAVASAFGRKFLGFSFWQSPKGEVKRRVALKALQVFKHR FT IRGLTPRSGGRSLPQVVENLRPYLLGWKAYFGLSQAPGLWKSLDGWIRRRLRAIQLKQW FT KTGKTTYRELRKLGANSDLAAAIASDSHRTWHNSAGLIHGVLTVAWFDRLGLPRLY" FT /colour=178 58 238 FT tRNA 2384751..2384826 FT /gene="tRNA-Ala-4" FT /product="tRNA-Ala" FT /note="codon recognized: GCC" FT tRNA 2384916..2384991 FT /gene="tRNA-Glu-3" FT /product="tRNA-Glu" FT /note="codon recognized: GAA" FT tRNA 2385044..2385119 FT /gene="tRNA-Ala-5" FT /product="tRNA-Ala" FT /note="codon recognized: GCC" FT tRNA 2385164..2385239 FT /gene="tRNA-Glu-4" FT /product="tRNA-Glu" FT /note="codon recognized: GAA" FT misc_feature 2385616..2385749 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.8e-62" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=205.100000 FT CDS 2385750..2386772 FT /gene="PSPTO2167" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO55684.1" FT /db_xref="GI:28852611" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL 2385750..2386772 FT /gene="PSPTO2167" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO55684.1" FT /db_xref="GI:28852611" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature 2386773..2386971 FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="7e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=322.700000 FT VR_#51 2419474..2427432 FT /colour=255 255 0 FT CDS complement(2427573..2429033) FT /gene="PSPTO2204" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO55720.1" FT /db_xref="GI:28852647" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(2427573..2429033) FT /gene="PSPTO2204" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO55720.1" FT /db_xref="GI:28852647" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT VR_#52 2445000..2482500 FT /colour=255 255 0 FT CDS complement(2468395..2469372) FT /gene="PSPTO2234" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55750.1" FT /db_xref="GI:28852677" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(2468395..2469372) FT /gene="PSPTO2234" FT /colour=178 58 238 FT VR_#53 2501881..2507652 FT /colour=255 255 0 FT misc_feature 2508959..2509096 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.1e-10" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=33.100000 FT misc_feature 2514700..2514824 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.9e-11" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=35.600000 FT CDS 2539902..2540897 FT /gene="cmaX" FT /codon_start=1 FT /transl_table=11 FT /product="cmaX protein" FT /protein_id="NP_792114.1" FT /db_xref="GI:28869495" FT /translation="MFDEANAQWGLVHALVLDGKGGARFIARTELQGLELQPQESLWL FT HWDRSHPQTHTWLRTGSGLSEFACDLLLEENTRPRLLPLPDQELLLFLRGVNLNPGAE FT PEDMVSVRIFAAAQRVISLRLRPLRATEELIELLGQGKGPTSASELILYLAQYLTDKV FT QDLVGELTESVDEEEEKTDADERYSPEHGKLLHIRRRAAGLRRFLGPQRDIYGQLSRI FT KLSWFANDDADYWNELNNSLTRYLEELELTRERVGLLLESEDRRLREHMNRTMYRFGI FT ITGIFLPMSFLTGLLGINVGGIPGSDSSYGFLVACSLIVALAAGQWWLFRRLRWV" FT /colour=0 0 255 FT diffusible 2539902..2540897 FT /gene="cmaX" FT /colour=0 0 255 FT /note="locus_tag: PSPTO2295" FT CDS 2552817..2554064 FT /gene="lsc-2" FT /note="similar to GP:13936822, and SP:O68609; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="levansucrase" FT /protein_id="NP_792124.1" FT /db_xref="GI:28869505" FT /translation="MSNINYAPTVWSRADALKVNENDPTTTQPLVSPDFPVMSDTVFI FT WDTMPLRQLDGTIVSVNGWSVIITLTADRHPDDPQYLGANGRYDIKRDWEDRHGRARM FT CYWYSRTGKDWIFGGRVMAEGVSPTTREWAGTPILLNDNGDIDLYYTCVTPGAAIAKV FT RGRIVTSDKGVELKDFTDVKILFQADGTYYQTEAQNSTWNFRDPSPFIDPNDGKLYMV FT FEGNVAGERGSHTVGAAELGPVPPGHEEIGGARFQVGCIGLAVAKDLSGEEWEILPPL FT VTAVGVNDQTERPHYVFQDGKYYLFTISHKFTYADGVTGPDGVYGFVGEHLFGPYRPM FT NASGLVLGNPPAQPFQTYSHCVMPNGLVTSFIDSVPTTGEDYRIGGTEAPTVRILLKG FT DRSFVQEVYDYGYIPAMKDITLS" FT /colour=0 255 0 FT CW_VIR_gene 2552817..2554064 FT /gene="lsc-2" FT /colour=0 255 0 FT /note="locus_tag: PSPTO2305" FT VR_#54 2565000..2585597 FT /colour=255 255 0 FT CDS 2566716..2568320 FT /codon_start=1 FT /locus_tag="PSPTO2317" FT /orf_name="PSPTO_2317" FT /product="Conserved domain protein " FT /function="recombinase activity" FT /biological_process="DNA recombination" FT /protein_id="AAO55831.1" FT /db_xref="GO:0000150" FT /db_xref="GO:0006310" FT /db_xref="HOGENOM:HBG493024" FT /db_xref="InterPro:IPR006119" FT /db_xref="InterPro:IPR011109" FT /db_xref="TIGR:PSPTO2317" FT /db_xref="UniParc:UPI0000008B3E" FT /db_xref="UniProtKB/TrEMBL:Q883N3" FT /transl_table=11 FT /translation="MQKLAFSYVRFSSLKQRHGDSLKRQTDMVANWLLANPEYKLSGET FT SYQDLGKSGFSGAHLDNAFGRLLAAIENGAIPKGSAILIEQIDRAGRMEPMEMLPLLSR FT IVNAGVDLVTLDDGITYDRASVNSNHLFLLVAKVQQAHQYSDSLSRRLRAAYQTKRAKA FT AAGEGATRRMPLWIRDGKLRDDIAPFVTQVFEDYAAGIGERRILGRLKGQHPDFETISP FT STFRRWLRNPVAVGRWNDIEDVWPAVVSKELWFRVQKRLTDGVKPKAASSKYLLSGLVK FT CARCGKNYCVGGQKGALTMLCVSRHRFGSGAGGCTNKRSIPYAVFDFIRSQTAHAALVR FT ASQSQNLTASEKRQIEIDGELIELRKQSSHAAEGLVRYGMVKEITDVLDRVTDQIDRLE FT KERVMLQAVPAPATLDDMIDVENDLLDDDIVKLNALLQGVGYEMVVDDRTIVVCEASVF FT STLQSQTYRYIGADRVTGTYKVTANDEVLHHLPNLDSKVQQDEYAEFLKKEARYESGEL FT KRDEFRFNLETGEINRV" FT /colour=178 58 238 FT gene 2566716..2568320 FT /locus_tag="PSPTO_2317" FT /old_locus_tag="PSPTO2317" FT /colour=178 58 238 FT CDS complement(2569753..2570166) FT /codon_start=1 FT /locus_tag="PSPTO2319" FT /orf_name="PSPTO_2319" FT /product="Resolvase, putative" FT /function="DNA binding" FT /function="recombinase activity" FT /biological_process="DNA recombination" FT /biological_process="regulation of transcription " FT /protein_id="AAO55833.1" FT /db_xref="GO:0000150" FT /db_xref="GO:0003677" FT /db_xref="GO:0006310" FT /db_xref="GO:0045449" FT /db_xref="HOGENOM:HBG023997" FT /db_xref="HSSP:2RSL" FT /db_xref="InterPro:IPR006119" FT /db_xref="InterPro:IPR012287" FT /db_xref="TIGR:PSPTO2319" FT /db_xref="UniParc:UPI0000008B40" FT /db_xref="UniProtKB/TrEMBL:Q883N1" FT /transl_table=11 FT /translation="MIDWARAGDVVHVHSIDRLARSMADLLKIVADFNAKGVHVHFHKE FT SMVFTGDDSPMQKLMLNMMGSFAQFEREVMKERQREGIAKAKEKGVYKGRVKTVDDAAI FT LALLSAGKSVRVVAAELGVNPSTVQRAKNASKG" FT /colour=178 58 238 FT gene complement(2569753..2570166) FT /locus_tag="PSPTO_2319" FT /old_locus_tag="PSPTO2319" FT /colour=178 58 238 FT CDS 2573654..2574676 FT /gene="PSPTO2321" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO55835.1" FT /db_xref="GI:28852763" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 2573654..2574676 FT /gene="PSPTO2321" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO55835.1" FT /db_xref="GI:28852763" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 2574673..2575482 FT /gene="PSPTO2322" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO55836.1" FT /db_xref="GI:28852764" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 2574673..2575482 FT /gene="PSPTO2322" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO55836.1" FT /db_xref="GI:28852764" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(2577833..2578810) FT /gene="PSPTO2324" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55838.1" FT /db_xref="GI:28852766" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(2577833..2578810) FT /gene="PSPTO2324" FT /colour=178 58 238 FT CDS complement(2583651..2584628) FT /gene="PSPTO2328" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55841.1" FT /db_xref="GI:28852769" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT CDS complement(2583651..2584628) FT /gene="PSPTO2328" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55841.1" FT /db_xref="GI:28852769" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(2583651..2584628) FT /gene="PSPTO2328" FT /colour=178 58 238 FT CDS 2589210..2590280 FT /gene="PSPTO2335" FT /note="similar to SP:P26502; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="exopolysaccharide production protein ExoZ, FT putative" FT /protein_id="NP_792152.1" FT /db_xref="GI:28869533" FT /translation="MERLYSLQGLRGVAVLGVVLFHMMSVESKFSGGDILLPPLLDFF FT QLGVDLFFVISGFVMVIVSRGRFQSGAEARRFLFNRVSRIYPTYWLYFFITLAVFLVQ FT PGMVNSGHGGSNLLMSFLLLPNDKVLLVMVAWSLLFELWFYVVFSGFLLFRERSLPPL FT LGGWALIIVVFNALADWQDYSSALKIILHPYSLEFILGAALALFFYGRHSARLPSVAV FT CALLAVALLVAVPLIGVYRLYDSQGLLRMLMVGGTFGTLVLTLALLERRRRLVVPGFL FT VATGDMSYTIYLSHLLVLGVIGRVWSLVGAWPESYLDNLFFAVLMMAAAVCYGWVGYR FT CFEKPVLDRANAFSKTHFRVST" FT /colour=0 255 0 FT CW_VIR_gene 2589210..2590280 FT /gene="PSPTO2335" FT /colour=0 255 0 FT misc_feature 2596430..2596565 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.1e-10" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=33.000000 FT promoter 2600072..2600104 FT promoter 2600072..2600104 FT tRNA 2634736..2634812 FT /gene="tRNA-Pro-3" FT /product="tRNA-Pro" FT /note="codon recognized: CCC" FT VR_#55 2635219..2667081 FT /colour=255 255 0 FT CDS 2636500..2637522 FT /gene="PSPTO2387" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO55898.1" FT /db_xref="GI:28852826" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 2636500..2637522 FT /gene="PSPTO2387" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO55898.1" FT /db_xref="GI:28852826" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 2637519..2638328 FT /gene="PSPTO2388" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO55899.1" FT /db_xref="GI:28852827" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 2637519..2638328 FT /gene="PSPTO2388" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO55899.1" FT /db_xref="GI:28852827" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS 2640996..2641355 FT /gene="PSPTO2392" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO55903.1" FT /db_xref="GI:28852831" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGVAALVELDIKVAVFDPVL FT FVFLNRHRNRVKILYWERNGFCLWLKRLESERFKTSPDETDEAIVLTVEELNWLLDGF FT DLWRNRPHQVLTPRFVA" FT /colour=178 58 238 FT MBL 2640996..2641355 FT /gene="PSPTO2392" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO55903.1" FT /db_xref="GI:28852831" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGVAALVELDIKVAVFDPVL FT FVFLNRHRNRVKILYWERNGFCLWLKRLESERFKTSPDETDEAIVLTVEELNWLLDGF FT DLWRNRPHQVLTPRFVA" FT VR_#57 2675000..2697500 FT /colour=255 255 0 FT CDS 2677987..2678964 FT /gene="PSPTO2426" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55935.1" FT /db_xref="GI:28852863" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 2677987..2678964 FT /gene="PSPTO2426" FT /colour=178 58 238 FT promoter 2683181..2683213 FT CDS complement(2685197..2686174) FT /gene="PSPTO2432" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO55941.1" FT /db_xref="GI:28852869" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(2685197..2686174) FT /gene="PSPTO2432" FT /colour=178 58 238 FT CDS 2689146..2689505 FT /gene="PSPTO2436" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO55945.1" FT /db_xref="GI:28852873" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 2689146..2689505 FT /gene="PSPTO2436" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO55945.1" FT /db_xref="GI:28852873" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 2689523..2691076 FT /gene="PSPTO2437" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO55946.1" FT /db_xref="GI:28852874" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 2689523..2691076 FT /gene="PSPTO2437" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO55946.1" FT /db_xref="GI:28852874" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT VR_#58 2710040..2717495 FT /colour=255 255 0 FT CDS complement(2715565..2717118) FT /gene="PSPTO2460" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO55968.1" FT /db_xref="GI:28852896" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(2715565..2717118) FT /gene="PSPTO2460" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO55968.1" FT /db_xref="GI:28852896" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(2717136..2717495) FT /gene="PSPTO2461" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO55969.1" FT /db_xref="GI:28852897" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(2717136..2717495) FT /gene="PSPTO2461" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO55969.1" FT /db_xref="GI:28852897" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT misc_feature 2722132..2722265 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.8e-62" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=205.100000 FT CDS 2722266..2723288 FT /gene="PSPTO2465" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO55972.1" FT /db_xref="GI:28852900" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIT FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL 2722266..2723288 FT /gene="PSPTO2465" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO55972.1" FT /db_xref="GI:28852900" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIT FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature 2723289..2723488 FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="2.6e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.200000 FT misc_feature 2746614..2746747 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="4.6e-62" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=203.800000 FT CDS 2746748..2747770 FT /gene="PSPTO2485" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO55992.1" FT /db_xref="GI:28852920" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRQSLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL 2746748..2747770 FT /gene="PSPTO2485" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO55992.1" FT /db_xref="GI:28852920" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRQSLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature 2747771..2747970 FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="1.8e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.700000 FT VR_#60 2796816..2823548 FT /colour=255 255 0 FT CDS complement(2801756..2803798) FT /codon_start=1 FT /locus_tag="PSPTO2538" FT /orf_name="PSPTO_2538" FT /product="Rhs element Vgr protein " FT /protein_id="AAO56045.1" FT /db_xref="HOGENOM:HBG349840" FT /db_xref="InterPro:IPR006533" FT /db_xref="TIGR:PSPTO2538" FT /db_xref="UniParc:UPI0000008C07" FT /db_xref="UniProtKB/TrEMBL:Q882T4" FT /transl_table=11 FT /translation="MQSEIISLPHFSLSLSDAHHDFQVFAFTGHEAISQPFCFKLDLVS FT EHTSLDLESLLGRSAFLKFAPDGGGIHGLIDQIAQGESGRRLTHYSITLRPHLARLEHR FT TDQRIFQDLTVPQIIEQVLEKHGLLATTFNFHLGTNYPKRDYCVQYGESDLHFIQRLCE FT EEGLHYHFEHSATAHQLVFGDDQTVFPELGPVIYRQDTALAGTKPAIQHYRLRLETRPN FT SHHSRDYHFEKPLLITKGSANVSRRIELQEYDYPGGFTSRDRGDHLAQRALERLNHDYL FT SGEGRSNQARLVSGHFLRLSEHPNKEWNDLWLLTGVRHEGRQPRVLEESACEIQNPGDF FT HQGYRNTFTTTPWYALYRSPLRHPKRRIFGSQTAVVTGPKGEEIHCDKHGRVKVQFHWD FT RDAEADDRSSCWLRVSSSWAGNRYGGMTIPRVGMEVLVTFLEGDPDRPLVSGCLYHAEH FT VPPYDLPAHQTRSVFKTLSSPGGGGSNELRIEDRAGQEQIYAHAQRNWDQNIKHDQKIR FT IGHERHDRVEANSYSEFKAQEHRLVDGDRLTEAKADDHLRVGGTRHLKLGNALLAEAGQ FT EIHLKSADKIVLEAGMELTFKVAGSFIKIDASGVTVGGPAIHLNSGGSPGSGSGATPLL FT PGPTLRADTTKPGEVLAHAQRRAMRRTPRCEVCEQQAAKKRSRNG" FT /colour=178 58 238 FT CDS complement(2801756..2803798) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_2538" FT /old_locus_tag="PSPTO2538" FT /product="Rhs element Vgr protein" FT /db_xref="InterPro:IPR006533" FT /db_xref="UniProtKB/TrEMBL:Q882T4" FT /protein_id="AAO56045.1" FT /translation="MQSEIISLPHFSLSLSDAHHDFQVFAFTGHEAISQPFCFKLDLVS FT EHTSLDLESLLGRSAFLKFAPDGGGIHGLIDQIAQGESGRRLTHYSITLRPHLARLEHR FT TDQRIFQDLTVPQIIEQVLEKHGLLATTFNFHLGTNYPKRDYCVQYGESDLHFIQRLCE FT EEGLHYHFEHSATAHQLVFGDDQTVFPELGPVIYRQDTALAGTKPAIQHYRLRLETRPN FT SHHSRDYHFEKPLLITKGSANVSRRIELQEYDYPGGFTSRDRGDHLAQRALERLNHDYL FT SGEGRSNQARLVSGHFLRLSEHPNKEWNDLWLLTGVRHEGRQPRVLEESACEIQNPGDF FT HQGYRNTFTTTPWYALYRSPLRHPKRRIFGSQTAVVTGPKGEEIHCDKHGRVKVQFHWD FT RDAEADDRSSCWLRVSSSWAGNRYGGMTIPRVGMEVLVTFLEGDPDRPLVSGCLYHAEH FT VPPYDLPAHQTRSVFKTLSSPGGGGSNELRIEDRAGQEQIYAHAQRNWDQNIKHDQKIR FT IGHERHDRVEANSYSEFKAQEHRLVDGDRLTEAKADDHLRVGGTRHLKLGNALLAEAGQ FT EIHLKSADKIVLEAGMELTFKVAGSFIKIDASGVTVGGPAIHLNSGGSPGSGSGATPLL FT PGPTLRADTTKPGEVLAHAQRRAMRRTPRCEVCEQQAAKKRSRNG" FT /colour=178 58 238 FT gene complement(2801756..2803798) FT /locus_tag="PSPTO_2538" FT /old_locus_tag="PSPTO2538" FT /colour=178 58 238 FT CDS complement(2803874..2804389) FT /codon_start=1 FT /transl_table=11 FT /gene="hcp-1" FT /locus_tag="PSPTO_2539" FT /old_locus_tag="PSPTO2539" FT /product="secreted protein Hcp" FT /db_xref="InterPro:IPR008514" FT /db_xref="UniProtKB/TrEMBL:Q882T3" FT /protein_id="AAO56046.1" FT /translation="MPTPAFLSVTGTKQGHITEQAGSIDSLGGHGQIDHPDESIVHAFS FT HEIISPYDAQSGEITGRRRHNAICITKVFDRASPLLLEALCRGEKLTDVVINWYRTNDG FT KEQNYYRTTLHGALIVAIKDHMPTCDDPNNSHAIHLQDVHFTYRQIRWDHVIATSSGSY FT DLDDLGLD" FT gene complement(2803874..2804389) FT /gene="hcp-1" FT /locus_tag="PSPTO_2539" FT /old_locus_tag="PSPTO2539" FT CDS complement(2806011..2806988) FT /gene="PSPTO2541" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO56047.1" FT /db_xref="GI:28852975" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(2806011..2806988) FT /gene="PSPTO2541" FT /colour=178 58 238 FT VR_#61 2829432..2846064 FT /colour=255 255 0 FT misc_feature 2856299..2856434 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="4e-13" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=41.200000 FT misc_feature 2858161..2858296 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.2e-10" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=32.900000 FT CDS complement(2868541..2869950) FT /codon_start=1 FT /gene="pchA" FT /locus_tag="PSPTO2595" FT /orf_name="PSPTO_2595" FT /product="Isochorismate synthase" FT /function="isochorismate synthase activity" FT /biological_process="biosynthesis" FT /protein_id="AAO56099.1" FT /db_xref="GO:0008909" FT /db_xref="GO:0009058" FT /db_xref="HOGENOM:HBG283278" FT /db_xref="InterPro:IPR004561" FT /db_xref="InterPro:IPR005801" FT /db_xref="TIGR:PSPTO2595" FT /db_xref="UniParc:UPI0000008C3C" FT /db_xref="UniProtKB/TrEMBL:Q882N1" FT /transl_table=11 FT /translation="MNPLPSFSDLQGCLTGGLMECLHSARAQVSTARPRVLASFSTPSP FT HVEPFGLFTANREQVQPACLWHVQAQGQYRLGLGLAHEFNAGPADSWQTLENRWRDMAA FT TAVVRGDHRPTLFGGFAFDRRQPRTRLWRDFPDAALTLPRFEFHESDGQTRLIVNVLID FT EHSQCAALAEALAGEWAEILARPLPGAPASGDQFVRLSMAHLWKQDVFHAVNRIKRGGL FT EKVVLARSQNVAAASPLEQVMQRLMHKQPNAYLFAFARGSSCFMGASPECLLTVRGDQL FT HTMALAGTAPRGANCADDARLGEQLLLSEKDNSEHAMVIDCIRHGLAEHCLVLDIACRP FT RLHKLPHIQHLLTPVKGTLAPNASLLGIAQSLHPTPAVGGLPRNEALDYIRSHEQLDRG FT WYAGPIGWLDDQGNGELAVALRSALLNGHRATLFAGCGLVSGSEPESEYRESDLKMQTM FT REALSGSGLSG" FT /colour=255 165 0 FT VR_#62 2868541..2901443 FT /colour=255 255 0 FT CDS complement(2869947..2870267) FT /codon_start=1 FT /gene="pchB" FT /locus_tag="PSPTO2596" FT /orf_name="PSPTO_2596" FT /product="Isochorismate pyruvate-lyase " FT /function="chorismate mutase activity" FT /function="lyase activity" FT /biological_process="aromatic amino acid family FT biosynthesis" FT /protein_id="AAO56100.1" FT /db_xref="GO:0004106" FT /db_xref="GO:0009073" FT /db_xref="GO:0016829" FT /db_xref="HOGENOM:HBG235415" FT /db_xref="InterPro:IPR002701" FT /db_xref="InterPro:IPR008241" FT /db_xref="TIGR:PSPTO2596" FT /db_xref="UniParc:UPI0000008C3D" FT /db_xref="UniProtKB/TrEMBL:Q882N0" FT /transl_table=11 FT /translation="MNVVKSAPECENLGDIRQGIDELDRQIVQILARRLTYVKAATRFK FT ASQQAIPAPDRVRAMLEERRQWANDAGLPVDETEDFFKDLIHWFINQQITHWRALHPEA FT QP" FT /colour=255 165 0 FT CDS complement(2870283..2871851) FT /gene="irp5" FT /note="Activates salicylate by adenylation and transfers FT the salicylyl moiety to irp2, the non-ribosomal peptide FT synthetase component of yersiniabactin synthetase. FT Yersiniabactin is a siderophore.; similar to SP:P40871, FT GP:2765198, GB:X68560, SP:Q02447, PID:338303, and FT PID:38418; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="yersiniabactin synthetase, salycilate ligase FT component" FT /protein_id="NP_792406.1" FT /db_xref="GI:28869787" FT /translation="MHTEHTSHDPLHPFADQTLPQRLRRWANQYGAHTALVAGDVRLS FT YAQLDQRVDRLAGGLAALGITAGDRVMLQLPNGVGFVCALFAVMRIGAVPVLAMPTQR FT AVDIAALCRLAEPVAYLIPDRLRDFDYRGMAAGIVEQQPSLAHVIVDGEPGPFIALSA FT LDAPCPTDPLADPRGLALLLLSGGTTGTPKLIPRSHADYAYNFSHSARLCELDSDSVY FT LAVLPTAHNFTLACPGVLGSLAAGATVVMGDSASCDAAMPLIEREGVTHVALVPPLAQ FT LWAQGRDWEDSDLTSLKLLQVGGSRLDPALAAHLLEALDCQIQQVFGMAEGLLCYTRP FT DDPLEVVLNTQGRPLSPFDQVRLVDTDLNDVAHGQTGELLTRGPYTITGYYRAADHTA FT RSFTADGYYRSGDLARWTPQGNLIVEGRIKEQIQRSGEKISAAHIENHLTALPDIESA FT VVVAVPDPLLGERICAFILGDPPTGAGQCIRDQLRRQGLGEDKLPDQFEWVAAWPLTA FT VGKIDKRQLAALAQ" FT /colour=255 165 0 FT sidero complement(2870283..2871851) FT /gene="irp5" FT /colour=255 165 0 FT /note="locus_tag: PSPTO2597" FT CDS complement(2871864..2872679) FT /gene="irp4" FT /note="Possibly involved in the release of an intermediate FT product similar to pyochelin, since the terminal FT yersiniabactin synthetase has its own thioesterase FT domain.; similar to GP:3818607; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="yersiniabactin synthetase, thioesterase FT component" FT /protein_id="NP_792407.1" FT /db_xref="GI:28869788" FT /translation="MPRNCGRRVDRMDVGMDAGMLRPFLRADQCQPHVLLCPFAGASG FT GAFHHWRELDEPGLNLTLAIYPGRDQRMHEPCLRQVQPLADSLAADIQAMPDAQRRPL FT ILAGHSMGAQVAFETCLLLEQAGTPPAGLVLSACHAPHLTGRRLLSHLDDRRFIEQLV FT AIGGVSDALLANPDLLALFMPLLRADFQATESYYRPLQADRQRLQTPTLLLHGSHDPE FT ADQEEVSAWRQWLCGDCRQQVMAGDHFYLTQRPRAFAAQVLNFIEQSISPFHP" FT /colour=255 165 0 FT sidero complement(2871864..2872679) FT /gene="irp4" FT /colour=255 165 0 FT /note="locus_tag: PSPTO2598" FT CDS complement(2872651..2873733) FT /gene="irp3" FT /note="This enzyme reduces the carbon-nitrogen bond of the FT second of three thiazoline rings of the siderophore FT yersiniabactin. Most probably this reduction takes place FT while an intermediate of the biosynthesis is still bound FT to irp2, the non-ribosomal peptide synthetase component, FT due to the presence of a conserved domain likely to FT function as a docking site for the reductase.; similar to FT GP:2765196; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="yersiniabactin synthetase, thiazolinyl reductase FT component" FT /protein_id="NP_792408.1" FT /db_xref="GI:28869789" FT /translation="MKRPLKVLVVGAKFGELYLNSFLLEQPGLQLAGLLANGSPRARA FT LANAFGIALYTDIEQLPDDLDIACVVVRSAVVGGAGGQLTESLLRRGLHVIQEHPVHP FT DELVRHQQLATRMGCQYIVNSFYPHTEAGRCWAGTAQRISRLLEGRKPNLAQLTTSRQ FT LLYSGLDLLFQALGCDLARQVSVSLLDGDDDFHTLSLNLPDSRVLLRLQRWMAADDPD FT LHSLVMHQLNLAWPSGYLSLDATYGPVNWTPALHAEAHDDDRQTLYTSNADYLQHATA FT MPLHPAASHWRSAHEIEGPAGVGWLLQQLLAVLQGRPRADGLQADYQLAVARLWQDIL FT RCAGPAEQRMASAPLFIDAAQLRAEG" FT /colour=255 165 0 FT sidero complement(2872651..2873733) FT /gene="irp3" FT /colour=255 165 0 FT /note="locus_tag: PSPTO2599" FT CDS complement(2873730..2883251) FT /gene="irp1" FT /note="This synthetase catalyzes the final steps in the FT biosynthesis of the siderophore yersiniabactin, adding one FT acetate unit with concomitant reduction to the alcohol and FT dimethylation followed by the addition, cyclization and FT methylation of one cysteine residue. The final product is FT released by the terminal thioesterase domain.; similar to FT GP:4106636; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="yersiniabactin polyketide/non-ribosomal peptide FT synthetase" FT /protein_id="NP_792409.1" FT /db_xref="GI:28869790" FT /translation="MPTFEHTYGASEPIAVIGLACRFPGARDSTEYWQNLLAGRECSR FT HFSREELLAAGLSAELIDNPDFVNVAAIIDDPDRFDAALFGYSRQEAESIDPQQRLFL FT QTVWHALEHAGFAPRDVAHKTGVFASGRMSTYPGRDAIRVTEVAQVKGLQALMGNDKD FT YLASRAAYKLNLRGPAMSVQTACSSSLVAVHMACESLRSGECEMAVAGGVAVSFPQHA FT GYLYQPGMIFSPDGRCRPFDASAQGTFAGNGVGAVTLRRLEDALRDGDPVLAVLRGSA FT INNDGHHKVGYTAPSVIGQREVIQDALLLADIDCASIGMLEAHGTGTPLGDPIEVQAL FT RDAFAHRTDIGGCALGSVKGNLGHLDTAAGIASLIKTVLAVSHGRIPPSINVERINPA FT LQLEQSPFYVPIQDRSWPAGPRRAGVSSFGIGGTNCHVIVEALPDALRSSGPVAQASA FT LLLSAASQHSLRQLAGRYAERLHAADAAADLAHTALQARQLDLPFRLAVPLHEETAPA FT LQAFAQGGSDALLYQGQASQGAQLWLCSGQGSQWAGMGKSLYGQSKAFSESLDRSFAA FT CAAHLQPSLQSVMFGEHEGLIDRMDYAQPAIVAFEVAMAAHWREAGLSPDLLIGHSVG FT EFAAVVIAGIYRLEDILPLVIIRGRLMNQCAAQGSMLAVFCDAATLQPLALEHGVEIA FT VHNAAQHLVASGERHAIRALAQTLQQRNLRHNHLSVAGAAHSRLLDPILDEFQKASAA FT LRPAQAKIPLISTLTGQPLSHAELERGDYWRRHLRQPVRYHQALTHALQTGVTIALEL FT GADAPLTGIGTRLEHAGVHWIASARRHKPATTVLQDSLLRLFAAGAALPWRTLLPSVG FT KRIHAPLYVFDEQRYWCDASQQPSTQAQDLLLEAGRKVVLQEGANLDLPRLERLYHCV FT TQLHAIYVDQMVRQCVPESIDQGAEPLSILRGGRLLPRHRQLLVRLLNACVEDGYYTL FT EHGRYRSARPIPYEQRPALLTELRSCCEGLDVIADTVERAGEQLFAMMSGAVEPVSVI FT FPQSTSSGVEVLYQQFSFGRYFNQIAAGVITGLIQAHQHSGHGPLRILEVGGGTGGTT FT AWLLPELRNVADVRYCFTDISALFSRRAEDKFSEYDFVEYAQFDLQKPASEQGFQAGH FT YDLIVAANVIHATQHVGQTLHNLRPLLKPGGALLMREITRPMRLFDFVFGPLVLPLHD FT EQARGGELFLSTAHWQQQCLESGFERLDWLPDDGSATAGISEHILLARTQAANVAPAL FT LTAGHDSGSAVLGRQLGEHLYQPDWTDCAGQPQRWKTRLQEACEQLAARHGDARRPPV FT FSRVVPLPETLTGLALHWSAEPFGVASVELKQCNDQGQWQRLGSADNRSERLTTLPAA FT NTASGTHYVWQWAPVNAQDTPLARLRVEPASVRAALAAVGVAHDPEASACLLIVQGGS FT LAEVASQVLDAVKTDTGQPLLVVTRNAWSLAADHTVNPEQRALWGLLRVACAEQPERA FT LAVIDLDSSKLNGSDDWQALLPGLKAAQSGERWIAVRDGVAQVQTLSVQRHQSASLPA FT QSFKDTGWHIVTGAFGGLGRLSSHWLADQGASRIALFAPRCPHDGEQWIDTLQQHYGC FT EIRWMACDISDQAALAACIDALRAEGGLSGAIHSAGLLDDTPLSNLDAARMQPLLQVK FT CSAARQLHTALADQGRYLLLYSSAAASLGAAGQGAHALASAYLDGLAESQTDTRLHTV FT SIAWGAWGETGRAAEDQLHARLALGGMGTLATGEGLWHLEQAVMRNSPWRLAMRIDPE FT RIDPRRRLLTRHIEQPATRAPVKSTRHSDALPAPTLTGDPQADQHALSQWLSASICRQ FT LRLSPDAAPAHNQDLMQLGLDSLLFLELSSDIQRQLGVRLDAEQAYRDLSIRGLSALL FT LSSTEKAPLAARDNFIVPQPDSRFEPFPLTPIQHAYWLGRTDLIDYGGVACHVLFEWD FT KAYADFDLTRFEQAWNALIARHDMLRMVIDSDGRQRILQNTPWYRLPRNDLRELPAEQ FT QQQRLLDIREDMSYRVLPTDCWPLFEVTVSELDAGHCRLHMNLDLLLFDVQSFKVMMD FT DLASAYAGQTLKPLELTFRDYVMADLAQRDSLQWRQAWRYWQDTLEQLPGAPQLPLAD FT NPPKGQPRFRTVQGKLDAAQWNRFKAHCQHVGVTASAALLALFAQTLESVSRTPEFTL FT NLTYFNRRPLHPQVQQLIGDFTSVLLIDFQLGRGDSPGQVMANTQARLWQRLAHTAVN FT GVELMRELGRRQGQTRQPAMPVVFTSMLGMSLDGKAIDQAMTSTLGDPVHVFTQTPQV FT WLDHQVMEIDGELVFSWYCMEDVLADGLIDSLFQSYCDLLQTLADQPQGFDSLPELPR FT HDWSVNLDGERFDPQRLEAQLRREPGVQSARVSVDREGRTLLGELVSQSPSAVDEALR FT APLPLLLPLSELPQLSDMQRQEVDLTWQALESRAREGILSTLQKHGLFSGAGQRHDLA FT QVMTRLGAQPQFAGLLRQWLAMLCQQGCLQQDGQHYQALPAQALQAAGQLLPDAEWSQ FT TLGTYLDACIEQHAELLRGDCSPLSLLFGHSDAVVQALYSNNPVLHCLNSALAQTAKA FT LAGTRRDLRVLEVGAGTGATTRHLLPMLEEHLSEYRFTDVSNLFLTQAQEHFAAWPQL FT TCSMLDVNQPVDFSQHPAQGYDLVVAVNVMHDAAHVTRSLKRLHRLLRSGGHLLLLEA FT TERDSALQLASIGFIEGLSNFEDERSEDDKAMLDLPRWRTAVQASGFSWVMNWPQQAD FT DSMRQHFMLARAEGVSHLDLAAVAGHLEPHPARWPLALRQVEQVVTAPAARQNPQQTC FT DSGPAREVDPALLEAVSQLWQELLDQPIEADSDFFLSGGDSLIATRMIARLNRMGHSG FT SSLRNLFDNPRLSDFCATLLDHSVQTDDNPLALARGRNTLSLFVFHASDGEVSAYLPL FT AQALDMQVFGLQATNALGSASLKALAAQYEQAIRRQQASGPYVLLGWSYGTFVAEETA FT RLLLRQGEQVRLILLDPVCRADLRFDDRPGLLRLMAEGAKSIALPDDLEQLPAAEQLN FT VFMNNATQAGVLKNPPQAQQAEQWLQRIEHLMTLLAQHSQPRQLDLPCLWLSAEGRPQ FT HWLPAEQDWQEWAATARRESMPCDHWQLLLDSDQVQRTAASISAWLAATHKESHP" FT /colour=255 165 0 FT sidero complement(2873730..2883251) FT /gene="irp1" FT /colour=255 165 0 FT /note="locus_tag: PSPTO2600" FT CDS complement(2884461..2890634) FT /gene="PSPTO2602" FT /note="Catalyzes the condensation of salicylate with two FT molecules of cysteine which are both cyclized to FT thiazoline rings. This enzyme contains a single FT adenylation domain which most likely charges both of final FT two thiolation domains with cysteine. Following the FT adenylation domain is an unidentified domain which most FT likely provides the docking site for the thiazoline FT reductase (irp3) which reduces the second thiazoline ring. FT The product of this synthetase may be released in trans by FT the thioesterase component (irp4) or directly transferred FT to the hybrid synthetase (irp1) for the final steps of FT yersiniabactin biosynthesis.; similar to SP:P48633, and FT GP:4106635; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="yersiniabactin non-ribosomal peptide synthetase" FT /protein_id="NP_792411.1" FT /db_xref="GI:28869792" FT /translation="MYTSTRKASTARGTPPQAFDPALLGEDIARQLRLSPEQLADDAN FT LLKLGMDSMHLMAWLNRFRRLGFKVTLSDLYDQPTLQGWQQLLSSAPVQVNSAEVASN FT DEPLALMSDGQPFALTSVQHAYLVGRSSEQPLGGVGCHLYQEFDGRGLTPQVLEAAIY FT QLIERHPMLKTRFLADGRQQWQAHSTWPGLKVHDLRDSDDTLRQQRLGDLREQLGHRR FT LDVENGETFDFQLCLLPDGGNRLLVNIDLLVADAASFNQLFEELIALIEDRPLPPSPV FT DYDFCSYLTQVRRNDQARVEKAKAWWLARLDDLPLAPILPLAQDPERIAQVRISRRRG FT QLDAAQWQAFKDHAGTAGVTPTMALATLFSAVLGRWSGQQSLLLNLTLFDRQPLNPAV FT ASMIADFTNILALPVSCCGQAFAELAQANQQSFAEVHEHSAWSGVEVLRELKKRQRHP FT HGAPLVFTSNLGRPLFGEAAENTLGAPGWGISQTPQVWIDHLAFEHQGQVYLQWDSNN FT QLFPEGLTDTLFDVYFEHVLALVADPAHWSHPLPDLMPSAQRAVREQVNATARAIPDG FT LLHDAVFLQAERTPQATALIQDQRRLSFAQLADQASRLAGCLQALGVTAGDTVAVSMT FT KDIGQIVSVLGILKAGAIYVPVPPDQPLARRIGIYQGAQVKCVLTSADEPEEHDIGTV FT LTWQQAILSEPLQHQVPVSAQQPAYIIYTSGSTGEPKGVVISHQSALNTCVDISQRHA FT VSPEDRVLALSALHFDLSVYDIFGVLGAGASLVLVNDRQRRDPALWCRLIDEHGITLW FT NSVPALLDMLLTYSEGFDLHSPASLRLVMLSGDWIGLDLPGRYHQYRSDGRFVAMGGA FT TEAAIWSNTCTVSRVEPHWRSIPYGTPLTNQRYRVVDETGRDCPDWVAGELWIGGAGV FT AHGYFNDAERSARQFVEVAGERWYRTGDMGCYWPDGTLEFLGRRDKQVKVGGYRIELG FT EIDAALNRLEGVKAAISMAPGEREKSLVAFVVPHGSSLCSRVEADPCTPASYADWLTP FT VTVATDTTDGLLADFLLEHLAFNGIPFSPSLTTDQVLQTYGSEARWHPLLTRWLEWLA FT TQDRLCCDVEGAWHLNHSSTKATSHDVACDALTHALQAHHDALRDILSGKRSPQTLLE FT HPYWAPEQLLMHAPGSRETLSALATSLADLSKRLQRPVRLIEAGARSAVTGAFLLGRL FT DAEQLHYTALDTSQAMVLKARERLAGFIHGSARRDTDSERQALVHSADVLLINNQLHR FT LDMPQAALQQWTPLCAPGAAVYVLELAQASALALVSAELLNEGRSAAEQLRNSEHWTA FT LLMQAGLGAPETDRSGALQRLILRAPDVLQRPDSARLAKALANELPGYMIPQRLYFLD FT ALPLTANGKIDHQALMQRCKPAATQADQCQPPENVREQVLAQLWQELLQSGAVHRHSQ FT FFQLGGDSLLATRLIGELAGRGYHARLDDLFNFPSLHAFAATLVEHNAPATVRLEHDP FT AGRYQPFALSEVQQAYLVGRQPGFVLSGVGAHFFVEFSVERLNVQLFQNAWQRLIERH FT DILRAVVRDGMLQVLKQVQAFIPRRHRVATLEGSEAHALRERLSHQVLDAGQWPLFDA FT QIVEDGSPHSRIFVSLDNLLLDGMSMQILLAELETLYLHPEQTLEPIAIGFRDYQCLR FT ASQPPSPGARAYWQRRIDNLPPAPRLPLRCAPADVGIPRFVRLAERLPADRWERLKAQ FT ANQRQLTPSGLLLSAFSAVLSAWSSAPELTLNLTLFDRQPLHTHIDRVMGDFTSLLLL FT AWHPTADWLGSAQNLQQRLWRDLAQRDHSAIRVMRELASRHGLAAAQMPVVFTSALGF FT DKGRFMAQSSWLKPVWGISQTPQVWLDHQVYESEGDLCLNWDAVEALFDPDVLRAMFD FT QYVSLLERLAEDPQAWGLSLAQLVPHGHPGADVAPLPRPQPLPLPLPHEPEQQADEQL FT VDQIRHAFHEVVGLKLQDCRQNFFDAGASSLKLVQLHVKLTQQGHRQLQATDLFGYPN FT ARALARHLSQTQPANDTRDQPRQAQLTQRNARRLRRNGGGS" FT /colour=255 165 0 FT VR_#63 2918440..2926390 FT /colour=255 255 0 FT VR_#64 2936674..2943347 FT /colour=255 255 0 FT promoter 2973825..2973856 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 2973945..2974919 FT /gene="hopP1" FT /locus_tag="PSPTO2678" FT /note="previously known as HopPtoP (PMID 11872842; Guttman FT et al, 2002) and HrpW-related (PMID 11854524; Fouts et al, FT 2002); similar to GP:3694999; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III helper protein HopP1" FT /protein_id="AAO56180.1" FT /db_xref="GI:28853111" FT /translation="MTMGVSPIRNSNSLPIDFSSLSAKSGGHNGLGSGDNSTIDPSTL FT LFGNQGQTQVNFAPPNSTDSSTSGVNAASGNTASGLVEQIMSLLKQLMQMLMQNNNAS FT GNPQTDSSTPGVGSGNSVGSGGTGSSLAGSDGGDETSGVGNGGLGDAGSTPTTSAADG FT VPSDTSLTGSGGLHLPQQLEQYRGDIMDAAKATGVPPSVIAGQIWAESRGQLNAATTN FT VNGKADAGLMQVNADTFKSLQQQNPGLLGNDVNDSHTNIMAGALYLRDQNKEFGDMGA FT ALRAYNSGPDKVNKADLSDTGGVGGSSYPADVLNFAKIIESGQGNLPA" FT /colour=255 0 0 FT gene 2973945..2974919 FT /gene="hopP1" FT /locus_tag="PSPTO2678" FT /colour=255 0 0 FT tRNA 2988034..2988110 FT /gene="tRNA-Val-1" FT /product="tRNA-Val" FT /note="codon recognized: GUC" FT tRNA 2988276..2988352 FT /gene="tRNA-Val-2" FT /product="tRNA-Val" FT /note="codon recognized: GUC" FT promoter complement(2990246..2990278) FT CDS 3045260..3046282 FT /gene="PSPTO2740" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56241.1" FT /db_xref="GI:28853172" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 3045260..3046282 FT /gene="PSPTO2740" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56241.1" FT /db_xref="GI:28853172" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 3046279..3047088 FT /gene="PSPTO2741" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56242.1" FT /db_xref="GI:28853173" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 3046279..3047088 FT /gene="PSPTO2741" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56242.1" FT /db_xref="GI:28853173" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT VR_#65 3087500..3095000 FT /colour=255 255 0 FT VR_#66 3141929..3169057 FT /colour=255 255 0 FT CDS 3152879..3162385 FT /gene="PSPTO2829" FT /note="This gene consists of three complete condensation, FT adenylation, thiolation domain modules. The adenylation FT domains are specific for leucine, leucine and an FT unidentified amino acid. This NRPS lacks domains typical FT of the initiating or terminating components of NRPSs. The FT following gene which contains a terminal thioesterase FT domain is most likely its partner. There are no upstream FT genes which could function as the initiating domain. If FT expressed, these two genes would appear to generate and FT previously undescribed natural product.; similar to FT GP:3510629; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="non-ribosomal peptide synthetase" FT /protein_id="NP_792633.1" FT /db_xref="GI:28870014" FT /translation="MRASVAPTFSLTAAQRDIWLDQISRGDSPLYNIGGYLQITGPMD FT AQALQRALAQLVAAHEGLRTVLMPGAGADGLPLQTYAASIPMPLAVHDFSDHLDPASS FT ALALISEQMQRPCVFDGRPLVEFCLIRLATDRYWLASQAHHLILDGWGFGQMMKSLGE FT LYTAQVEGHSLELDAPRYSDFIVDDVRYHASPRFAKDKAYWLDKYQNLPEPLLVSRYH FT NRRSTDPAPSHAWVQALPEALHARMKKFAESHNASTFHVLLAALHVYFTRTTQRKEWV FT VGLPLLNRTGAHFKATLGHFAQVSAVRMAFAEGLDFGALVIEVRDALKRDFRHQRFPL FT SELNRSLELSREERAQLFEVSVSYELEDHAYRYGEAQAKTVKVSNGFEATPLAIHLRS FT NSLNDDASLHMVHHRAWIDDAEAQAIAGRLLHILEQGVESPALQIDDFQLLTPAEQLH FT LQHWNQTQTEPGDEPLIHLRIEQQAHAFPHAVAAAFQGQHLTYAQLNRHANALARRLI FT DQGVRPDDRVAVVSRRSLETLIGLLAILKAGAAYVPIDPSHPRERLNYLLSDSAPVAV FT LTLSSLADRLPPLAVPLIELDHCAHSQGDDSNPQVSGLSRDNLVYVIYTSGSTGQPKG FT VMVEHHTLASLVDWHCAAFDVKAGSHTSCLAGFGFDAMAWEVWPTLCAGATLHLAPVQ FT ESGEDIEAMLNWWRAQPLDVSFLPTPVAEYAFSQDDEHPTLRTLLIGGDRLRQFAHNR FT RYAVVNNYGPTETTVVATSGQVFASGSLHIGVPIANTRVYVLDGHLQPLPPGVPGELY FT IGGAGVARGYLNQPQLTEERFIHDPFSDVASARMYRSGDLVAWNADGTLDYLGRNDDQ FT VKIRGMRIEPGEIEAVLTCQQGVKDAVVLVRDFHLLAWFTETSAVDTDALNHALRALL FT PGYMVPRAFTRMPSLPLTANGKLDRRALPDPDPAYLLGHAYEAPLGEVEIAMAAIWAQ FT VLGVERVGRHDNFFELGGHSLLAVKLVEQLRKAGLQADVHVLLSQPTLAALAACNTAA FT SNTEAFQVPENRVPPGCTRITADMLSLVSLEQAAIDQIVASVPGGAANVQEIYPLAPL FT QKGILYHHLTAGQGDPYLLQWRLAFDSLERLHAWAAALQQVINRHDILRTSVVWEGLE FT SPQQVVWRRAELTLQAVDFEAEDSQISVIDRLQRRYDARSHRLDLAQAPLMRLVHARD FT SSSGETVAILLFHHLVLDNTAMEVVSREMQALLSRQYSALKTPVPYRNYVAHVNLRND FT DACHKAFFSEMLADVEEPTLPFGIHDVPADGSGIEEDRRTLDNDLALRLREQARQLGV FT SAASLMHVAWARVLSVLANRRDVVFGTVLLGRMSGEGAERALGVFINTLPLRVDTALA FT TRAAVKAVHSRLAALIAHEQASLVLAQGCSGVASGTPLFSALLNYRHSAEVKPHDGEG FT LWQGVRVLGGDVRSNYPLTLSVDDLGENFDLHVLAMQGMGAERVAGWMQNTLEQLVQA FT LERAWPLALDNVSILDADERLHLLEDFNPARQAFPERLTVHALIEAQVARTPQSPALI FT QDGTSLSYAQLNQQANRLAHHLISLGVRPDERVALCLHRGPQRLIAMLAVLKAGAAYV FT PVDPVYPAERIAYLLQDSTPRLVLTEHATLALVGDIAQVNIEQAEVHSHPDSNPQVQG FT LDAQNLAYVIYTSGSTGQPKGVMVEHRTLANLVHWHCQAFSLHAGSHTASVAGFGFDA FT MAWEVWPALCAGAVLHLPPAQVGNEHVDELLDWWLEQPLQVSFLPTPVAEQAFRRPRQ FT HPTLRTLLIGGDRLRQFDSDPGFAVINNYGPTETTVVATSGPVTPGGPLHIGGPIANT FT RVYVLDEQLQPVPVGVIGELYIGGAGVARGYLNKPQMTEERFVADPFSDKVQARMYRS FT GDLVRWNVDGSLDYLGRNDDQVKIRGMRIELGEIEAVLARQADVKDAVVLVRGERLLA FT WYTEVSAVEPETLREALQACLPPHMVPLAFTRLQSLPLTSHGKLDRNALPDPDLQALT FT GQAYEAPQGETETVMAQLWAQVLGLAHVGRHDNFFELGGHSLLAVSLVERLRTIGLSV FT DVRVLLGQPTVAALAASVGKGREISAPVNRVPTGCTHITPELLSLTRLDQPTIDRIVA FT TVPGGAANVQEIYPLAPLQEGILYHHLTAEQGDPYLLQLRINVDSLDRLNAVAAALRT FT VIARHDSLRTAIVWQGLEVPQQVVWRHADLTVEHVASAQIDAEPGAARMDLARAPLIR FT LLYSPDATGAGLSATLQFHHIVVDATALEVMREEMLAHLRGEPGPTLPAVPYRNYVAQ FT ARLGVSEAEHEAYFREQLGDIDAPTLPFDLRDVQGDSRTIEEARQVIPDALLRGLRSQ FT ARQLGVSVASLLHLAWGRVLAAATGNPRVVFGTVLLGRLQGGAGADRGMGMFINTLPL FT RIDLDNVGVRDGARATHARLAQLLGHEHASLAQAQRWSGVAAPLPLFSAILNYRHAAG FT QARQDAQHDAWQGLDILASEKHTNYPLSLNVDDLGDSLRLSVTVPSEIGARRICGYVQ FT QVLAGMLDALENQPDLPLQRLPVLPADECQRLLVDFNATDVHHDLQQTLQGLFEAQVA FT RTPQAVAVRAGRSQLSFRQLNEQANCLAHHLIKLGVRPDDRVAICVERGVGMVVGLLA FT ILKAGGAYVPLDPSYPRERLHYMFKDSAPIALLTQATTRALLDDEGTPRVDLDSADWD FT MQHVANPRVTDLTPNHLAYVIYTSGSTGTPKGVMVEHRNVSNLVQWSSRLCPPTSGSA FT LLHKTPISFDASVWEIFWPLSSGIALVLARPDGQRDPAYVAQVIQERRISVVQFVPVL FT LQQFLDLPQSRDCHSLTDIVCGGGELTVALAEQLRQRLPQVRLHNVYGPTETTVDCSV FT WTLEPHQPVPGSVLPIGRPISNTRMYVLDAQDQPVPQGVSGQLHIGGSGVTRGYLNLP FT QADAERFIDSPFVSGDRLYRSGDLVRQRADGLLEFLGRNDDQVKIHGLRIEPGDIQAC FT LTAHPDIQQAVVLVRDEPPGGQRLVAYYTGTLLPIETLRELLRARLPDYMVPALYVHL FT HEMPLAPNGKLDRKALPAPGVDALLTRPYEAPQGETETLLANLWADLLGVELVGRHDN FT FFELGGHSLLAVSLTARLRQEGIEADVRALFEQPTLAGYAAITENMEIIL" FT /colour=135 206 250 FT NRPS 3152879..3162385 FT /gene="PSPTO2829" FT /colour=135 206 250 FT CDS 3162382..3180171 FT /gene="PSPTO2830" FT /note="This gene consists of five complete condensation, FT adenylation, thiolation domain modules followed by two FT thioesterase domains. The adenylation domains are FT specific for leucine, threonine, valine, leucine and FT leucine. The preceding gene is most likely its partner FT but may not be the initiating component. If expressed, FT these two genes would appear to generate and previously FT undescribed natural product.; similar to GP:3510629; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="non-ribosomal peptide synthetase, terminal FT component" FT /protein_id="NP_792634.1" FT /db_xref="GI:28870015" FT /translation="MSINELLATLKAHDIQLTVKDGQLVVQGNRRALSDNGLLDHLRA FT HKPALIELIEQGDYRSGKRGALVLPANGIVPGCERITPGMLTLVELDQVAIDRLLDLI FT PGGAANVQDLYPLAPLQQGILYHHVTATQGDPYVMQVQFAFSDQPRLEAFAQALQTVI FT NRHDILRTSVHWDGLDTPVQVVWRHAELKVDSVSTGAGVTMDLGQAPLMRLVCHESAP FT ADGHGVKATLLFHHIAMDHSALEVVRHEIQACLLGQANALGVPVPFRNYVGQALLGVS FT EEEHETFFREMLADLDEPTLAYGLQDLSGDGDDLEEHSITLDLLLCQRLRAQARTLGV FT SVASLFHLGWAQVLAGLTGQPRVVFGTVLMGRLLGAEATERALGIFINTLPLRLDLDD FT QDVRGAVRTTHQRLTALMRHEHAPLALAQRCSGVQAPTPLFNALLNYRHSAPAQASGE FT TWQGIEVLQAQERSNYPLVLSVDDLGEAFGFTAQTSAGIEPQRICAYLQRAMESVIDA FT LEQTPQMPVAQLDIVPASERTQLLQGFNDHHAEYQRALTLQQRIEQQAQARPDAIAAQ FT VGEHCLSYGELNQRANALAHHLISLGVRPDDRVAVVARRGLETLVSLLAVLKSGAGYV FT PIDPAHPDERVAYLLTDSAPLAVLTQPALLPRLEGLSLPGPKALLIDLERSDWPAKTG FT NPQLADLTSSHLAYVIYTSGSTGQPKGVMVEHRTLNNLIDWHCEAFDLRAGSHTASVA FT GFGFDAMAWEVWPALCAGATLHLPPADIGNEQLDALLDWWLAQPLQVAFLPTPVAEYA FT FSRDLRHPTLRTLLIGGDRLRQFHRDPGFAVINNYGPTETTVVATSGRLLPNGSLDIG FT KPIANTSVYLLDSLHKLVPFGVAGELYIGGESVARGYLNQPQLTAERFLRDPFAEPPQ FT ARMYRTGDLARWNPDGTLEYLGRNDDQVKLRGVRIELGEIESQFSQLPGIEEALVLAR FT EDEPGQPRLVGYFTERADATPSRLEDLRTALAARLPAYMVPGALVRLDSWPLTANGKV FT DRRALPVPDRSALSSGEYQAPQGDLENALAAIWSELLQVERVGRQDRFFELGGHSLLA FT MRMVSQVRQRLSLELTLGDLFADSALSAVAQCLAAAARSQLPAIDVQPRNGPVPLSSA FT QQRIWFMAQMEDANSAYNISLGLKLTGPLDSRALKRALERIVARHDSLRSRFSQEDDI FT AWVQAAPITSVPDICWQDLRGHGADALRAVAQEEAAQPFDLRHDLPVRGRLLCLAEER FT HVLLLTVHHIVADGWSLGVLTRELTALYQAFSQGLADPLPPLTLQYGDYAVWQRTWLD FT AERLSHQADYWQQALTGAPVLLTLPTDRPRPAHQDYSGASVALTLDARLSTDIRTFCQ FT AQSVTPFMLFMGAWAVLLSRLSGQEEVVVGMPVANRRRAEIEGLIGLFVNTLAVRVDT FT SGEPDAVTLLARIKARVVAAQDHQDLPFEQVVERLRPPRSLAHSPLFQASLTWDGSQG FT LDLQLGDLQLEPLDEQAAFAKFDLALSVGDSAEHFRCIVEYATALFDRSTVERYLGYL FT EAILRGMVADGQTVVNHIALLSEAERRQLTEGFNAPDVVYPQGQTLHSQFEAQVQRTP FT DAIAVSFADQSWSYATLNAQANKIAHRLIGLGIGEDDRVAICTHRGLEMIAGLLGILK FT AGAAYVPLDPAYPLERIAYTLGDSAPVALLSQRSVQAALPVSQVPVISLDEAGLQDES FT ERNPQVSVKPTSLAYVIYTSGSTGLPKGVMIEHRNVARLFSATEDWFGFNEQDVWSLF FT HSFAFDFSVWEIWGALLHGGRLLIVPQLVSRSPEDFYALLCSAGVTVLNQTPSAFRQL FT IAAQGENPQAHSLRQVIFGGEALETAMLKPWYARNVNAATQLVNMYGITETTVHVTYY FT PVQPEDAQRVGASPIGKRIADLQLYVLDTCGEPVPLGVVGELYVGGAGVARGYLNREA FT LTAERFLDNPFSHAADARIYRTGDLARWMADGSLEYLGRNDEQVKIRGFRIELGEIAS FT RLNDHPQVLDAVVVAREDVPGDKRLVGYYTCAEDQTGLDIEQLRAWLSGLLPDYMVPA FT AFVRLAGLPITANGKLDRKSLPAPDRDSLASRAYEAPHGAVEIALASLWGELLQVEQV FT GRQDNFFELGGHSLLAVTLIARMRRLDMRADIRVLFVQPTLAALAEAVGRDSEIQVPA FT NLIDAHCQHITPELLPLVALDQAAIDRIVAQVPGGAANVQDIYPLGPLQTGILYHHLT FT AGDRDPYLLQPQFAFADTSRLDAFCQALQRVIERNDILRTALCWEGLQAPVQVVWRQA FT PLRIQETPLPELFNAPRMELTQAPLLHLVYAHDPDNQRITAVLRYHHVIMDHIALDVL FT SHELQAILLGNEAGLAAPVPYRNYIAHVLQGPGDDAHETFFREQLGDVDEPTLPYGLA FT MTSAEQIPGEARLKLDSALCSQVRDQARQLSVSAATLMHLAWAQVLGQLSGRDSVVFG FT TVLLGRLRGGEGGERALGVFINTLPLRMDLAGHSARSAVLDLHGRLVGMLAHEHAQLA FT LVQRCSALPAGAPLFNTLLNYRHSAVSQVDDPASSAAWQGIAVIHAEERSNYPLTVCI FT DDFGDDFGLTVQAAPGIDPQRICAYLQQALVHLVQALQQPPKTALIESSVLPEAEHEQ FT LLTTFNDTHREYPRELPVHRLFERRAALQPQAIAAVHGRRSLTYGELNERANHLAHYL FT LGQGVRPDEHVAILLPRSLELLISQLAIGKCAATYVPLDVNAPAERQQYMLGDCQAKC FT VLTQSAMSIATSVQRIDLDQLNLDDQPAHDPGLPQGADTAAYVMYTSGSTGAPKGVRV FT GHRGIVRLVLNNGYAEFNEQDSIAFASNPAFDASTMEVWGALLNGGQLVVIEHTTLID FT PARFSAALRHGNVSVLFLTTALFNQYVQMIPEALGGLRVLISGGERADPVSFRAMLAQ FT APGLHLLNGYGPTETTTFATAYDVRALASSAESVPIGRPIGNTRVYVLNAQQRLAPLG FT VIGELYIGGDGVALGYLNRPELTVEKFIADPFSDQPGAMMYRTGDLGRWLEDGQLECL FT GRNDDQVKIRGFRIELGEIVNCLHQLPGIREAVVLAREDEPGNVRLVAYFTSQQDVEA FT PAPGQMRAHMQANLPDYMVPVAFIELTALPLTANGKLDSRALPEPDHSSLLGLAYEPP FT QGDIEIALAQIWAEVLQVERVGRHDHFFDMGGHSLLAMRMVSQVRQQLGMELPLGELF FT ALGELAAVAAALAGAGRSELSLILPAPRDQSLPLSFAQQRLWFLAQLEGGSEAYNISL FT ALSLRGPLDVNALTAALARIVERHETLRSRFIACEEGAEVFFAELPGSSLLHVEDLRL FT CPETLAERVVSEAATPFDLTRGPLIRGSLLQLEDERHVLLLTVHHIVADGWSMGVLTR FT ELLALYTALRHGKADPLPALAIQYADYAVWQQSWMSGERLQHQAAYWRQTLDGAPTLL FT TLPTDRPRPAQQDFAGASLAVRLNSQLTAGLRALAQRQGVTLYMTLMTAWGALLACLS FT GQAEVVIGSPIAGRGRAELEGLIGLFVNTLAVRIDTSSAATGEALLAQVRTRVLEAQD FT HQDLPFEQVVEIVRPARSLAHAPLFQTTLNWLAGDSSLPQMDGLSLALVEQSAQTSKF FT DLSLNLGEHGDALVGTLDYATALFDDTTVQRYCGYFEQLLQALVNDQQTVLAQVPLVG FT RQERQYLVETLNPTGLSFSQNQTVHGLIEAQATRLPTAIAAQVGEQSLSYAELNRQAN FT SLAHYLISLGVRPDERIAVVARRGLDTLVGLLAVLKAGACYVPVDPAHPGERIAYLLS FT DSAPVAVLAQQTFIERLPALGVPVIALDRPHWPEQAHNPIVAGLTAKDLAYVIYTSGS FT TGQPKGVMVEHRTLENLVHWHCQAFDLHAGSHTASVAGFGFDAMAWEVWPALCAGATL FT HVPPAEIGNEQLDALLDWWLAQPLQVAFLPTPVAEYAFSRQLRHPTLRTLLIGGDRLR FT QFHREPGFAVINNYGPTEATVVATSGRLLPDGSLDIGKPIANTRVYLLDEQQQLVPLG FT VAGELYIGGEGVARGYLNQPQLTAERFLLDPFAGQPHARMYRTGDLARWNADGTLDYL FT GRNDDQVKIRGVRIELGEIEAQLAQLPGIEEALVMAREDEPDQSRLVAYFIERADSAT FT VAAAQLRSDMLARLPGYMVPSAFVRLDAWPLTANGKVDRRALPAPDREALPGRDYEPP FT QGELETALAEIWSDLLQVGQVGRHDHFFELGGHSLLAVTLIARMRRRGMDADVRVLFA FT QPTLAALASAIGSGSQVKIPANLIGADCTSITPDLLPLVKLDQAGIDRVVASVTGGAA FT NIQDIYPLGPLQAGIFYHYLSAGDDDPYRLQARFAFADRSRLDAFCQALQQVIARNDV FT LRTSLCWEGLETPVQVVWRHALLPVIELPLAALHDPEPLNLLDAPLLRLVHAEDPDNQ FT RIVAVLLFHHLIMDHVALDLLSHELQAVLLDQQAQLPAPVPYRNYIAHTLLGPGNDAH FT ETFFREQLGDLEEPTLPYAQATLPGPEVPGEARLRLDAALSQRIRNQVRQLGVSPASL FT MHLAWAQVLGRLSGRDTVVFGTVLIGRLGGAEGAERTLGVFINTLPLRIDLAEQTARD FT AVLQTHRRLTGLLAHEHASLALAQRCSALPAGAPLFSALLNYRHSAAPGSHDKAASTA FT WQGIELLQTAERSSYPLTLSVDDLGEVFDLTALTSAGIDARRVCAYLACAVESLLVAL FT EHAPLTPIQALNTLPVSERSELLHGFNTESNRPESALTIHQRIEQHALHQPDTVAVQV FT GDQRLTYGELNHRANALAHYLIGLGVRPDDRVAVLARRGLETLCAMLAVLKAGASYVP FT VDPAHPDERIGYLLEDSAPVVVLAQFDLLARVPDLHVPRVALDRPDWLQRDDTPHVPG FT LTAENLAYVIYTSGSTGQPKGVMVEHRTLNNLVDWHCQAFDLRAGSQTASVAGFGFDA FT MAWEVWPALCAGAVLHLPPADIGNEQLDLLLDWWLAQQLHVAFLPTPVAEYAFSRELH FT HPTLHTLLIGGDRLRHFKRDPGFAVVNNYGPTETTVVASSGLMLPQGVLHIGKPVAHA FT RLYVLDAHSQPVPLGVPGELYIGGTGVARGYLNRPDLTAERFLDDPFSNVTAARMYRT FT GDLVRWLADGTLEYLGRNDDQVKIRGVRVELGEIEQQLAQCPGVAEAVVTTQRLEDGT FT LRLVAYFTRRDAALDSATLRSQLLGRLPEYMVPATYVGLDALPLTQNGKVDRKALPAP FT DMDALATAIYQAPSSVLEERLAQLWAEVLEVGRIGRHDSFFELGGHSLSAIRLVSLLQ FT KAGLPLTLAELFQHPSITALAGLLDQRPLPTTDAQEVITVRAGGSEPALFLIHDFTGL FT DAYFPVLGQHLQGDFPIYGLPGIGLGQQQLRTLECLAARLVERIRQVQPRGPYRLAGW FT SFGGVLAYEVATQLLGMDEAVTFLGLIDSYVPRLTDQGKARWQGPDLLERQLLSHCIA FT HWQVQDETGSTALARLHSLGEQAALPDFETLLQLCRDEQLLYEELAQADDRQLRHYLE FT REVAHGHALAHYQVEPLSLPIHLFCADQRPMAPPGASATLGWAEILPKGALQCVSVPG FT DHMSMMQAPHVNTLGQRIGQALQDAPATAHSAPAYQSLLAIQSGRDGHAPLFCVPGAG FT DSVTSFIGLAEALGPDWPIYGLQPRGLDGRSVPHSRVEAAAQSHVLAIEAMYPQGPLH FT LVGHSFGGWAAHAMAVKLQARGREVASLTLIDSEAPGGDGLSSKPYTATAALERLIEA FT LQLSSGKSLELDPLTFADCDGDTQLHLLQSAMVRIGLLPQRLAPQALQGIVRTFASAV FT RTVYRPDPGSYNGKASLVLVDDPQLDALDNQLEQASSAAGWQQLLPQLALWQGPGNHF FT SVLKAPDVYSLAAWWYDGLTIGVEETQ" FT /colour=135 206 250 FT NRPS 3162382..3180171 FT /gene="PSPTO2830" FT /colour=135 206 250 FT VR_#68 3173866..3260000 FT /colour=255 255 0 FT CDS 3186079..3187056 FT /gene="PSPTO2836" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO56335.1" FT /db_xref="GI:28853267" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 3186079..3187056 FT /gene="PSPTO2836" FT /colour=178 58 238 FT CDS 3189278..3189637 FT /gene="PSPTO2839" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56337.1" FT /db_xref="GI:28853269" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 3189278..3189637 FT /gene="PSPTO2839" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56337.1" FT /db_xref="GI:28853269" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 3189655..3191208 FT /gene="PSPTO2840" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56338.1" FT /db_xref="GI:28853270" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 3189655..3191208 FT /gene="PSPTO2840" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56338.1" FT /db_xref="GI:28853270" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS 3191955..3193469 FT /gene="PSPTO2841" FT /note="similar to SP:Q51761, GB:X73124, SP:P39592, FT PID:413948, and GB:AL009126; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy14, transposase" FT /protein_id="AAO56339.1" FT /db_xref="GI:28853271" FT /translation="MRKIREVLRLKFDAGLSVRKIAASLSIGHSSAGDYLCRFAASGL FT QWPIDISDAELNRRLFPPTVPVPTDQRPMPDWAWVHTELRRPGVTLALLWQEYRLAHP FT QGFQYSWFCEHYRLWAAKVDVVMRQEHRAGEKLFVDYAGQTAPVIDRQTGEIRQAQIF FT VAVLGASSYTFAEASWSQKLPDWLGSHVRCFAFFGGTTQILVPDNLRSGVTKAHRYEP FT DINPSYRDLAEHYGVAVLPARSRKPKDKAKVEVGVQVVERWILAVLRNRQFFSLGEFN FT TAIALLLDRLNHKPFKKLPGSRRSAFEALDQPALQGLPEHPYVYAEWKKVRVHIDYHV FT EVDGHFYSVPYQLVKHQLEVRLTAQTVECFHANQRVASHLRSLHKGRHTTQTEHMPKS FT HREHAEWTPQRLIRWAEQTGPNTTGVIAYILERRIHPQQGFRACLGILRLSKQHGEAR FT LEAACQRALALGACSYKSLESILRQGLERLPLAQQNLPLLPDEHINLRGPDYYH" FT /colour=178 58 238 FT MBL 3191955..3193469 FT /gene="PSPTO2841" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to SP:Q51761, GB:X73124, SP:P39592, FT PID:413948, and GB:AL009126; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy14, transposase" FT /protein_id="AAO56339.1" FT /db_xref="GI:28853271" FT /translation="MRKIREVLRLKFDAGLSVRKIAASLSIGHSSAGDYLCRFAASGL FT QWPIDISDAELNRRLFPPTVPVPTDQRPMPDWAWVHTELRRPGVTLALLWQEYRLAHP FT QGFQYSWFCEHYRLWAAKVDVVMRQEHRAGEKLFVDYAGQTAPVIDRQTGEIRQAQIF FT VAVLGASSYTFAEASWSQKLPDWLGSHVRCFAFFGGTTQILVPDNLRSGVTKAHRYEP FT DINPSYRDLAEHYGVAVLPARSRKPKDKAKVEVGVQVVERWILAVLRNRQFFSLGEFN FT TAIALLLDRLNHKPFKKLPGSRRSAFEALDQPALQGLPEHPYVYAEWKKVRVHIDYHV FT EVDGHFYSVPYQLVKHQLEVRLTAQTVECFHANQRVASHLRSLHKGRHTTQTEHMPKS FT HREHAEWTPQRLIRWAEQTGPNTTGVIAYILERRIHPQQGFRACLGILRLSKQHGEAR FT LEAACQRALALGACSYKSLESILRQGLERLPLAQQNLPLLPDEHINLRGPDYYH" FT CDS 3193490..3194245 FT /gene="PSPTO2842" FT /note="similar to SP:P55923, GB:X73124, SP:P39592, FT PID:413948, and GB:AL009126; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy14, transposition helper protein" FT /protein_id="AAO56340.1" FT /db_xref="GI:28853272" FT /translation="MLPNPTLDKLQTLRLHGMIKSLGEQHATPDINDLSFDERLGLMV FT DREVTEREDARLTTRLKAARLRHNACLEDIDYRSPRGLDKAMILQLGGGQWLRDGLNL FT IIGGPTGVGKTWLACALAHKACRDGYSVRYLRLPRLMEELGLAHGDGRFAKLMAGYAK FT TDLLILDDWGLAPFTAARRRDMLELLDDRYGNRSTLVTSQMPVDKWHALIGDPTLGDA FT ILDRLVHNAYRIELKGESMRRRATKLTTAGTSD" FT /colour=178 58 238 FT MBL 3193490..3194245 FT /gene="PSPTO2842" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to SP:P55923, GB:X73124, SP:P39592, FT PID:413948, and GB:AL009126; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy14, transposition helper protein" FT /protein_id="AAO56340.1" FT /db_xref="GI:28853272" FT /translation="MLPNPTLDKLQTLRLHGMIKSLGEQHATPDINDLSFDERLGLMV FT DREVTEREDARLTTRLKAARLRHNACLEDIDYRSPRGLDKAMILQLGGGQWLRDGLNL FT IIGGPTGVGKTWLACALAHKACRDGYSVRYLRLPRLMEELGLAHGDGRFAKLMAGYAK FT TDLLILDDWGLAPFTAARRRDMLELLDDRYGNRSTLVTSQMPVDKWHALIGDPTLGDA FT ILDRLVHNAYRIELKGESMRRRATKLTTAGTSD" FT CDS complement(3209245..3210549) FT /gene="PSPTO2856" FT /note="similar to GP:2950326; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56352.1" FT /db_xref="GI:28853284" FT /translation="MPAPTTLHPLFETYARFGDLNFSSLKHELPCINEYLSAFPPEIQ FT AVEGYRAVRSFLKSYAGNESTFNSYRTHVERLLLWTLIKSKVPLLEMRRTNAEEFLEF FT CLAPDPGWVKPVVKSRFIRVGTRRKLATDTYTLNPDWSPFSQSVSKEERKRAKEESRP FT ILQENYKPAQGSIAQIFAVCGSFFQHAIDEGFCEHNPFRAVKQKSKYKQRTTGEHESR FT ILTSLQWDFVLETAEQLATQNPKYERTLFIVATIFAMYLRVSDLVGRENWTPSMGDLR FT KDGAGNWWYHVVGKGNKAGKISVRDDYVENYLKRWRVHQGLSPLPGFRETTPLIATQR FT GRAGLSDRHVRLLLQEVFDRALERMQAENWADEDVSRLRAASLHWLRHTSATFDAPYR FT DMKDLQVDLRHNSLSTTQNVYYNSEDEKRAYSIKRLPMKERT" FT /colour=178 58 238 FT MBL complement(3209245..3210549) FT /gene="PSPTO2856" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:2950326; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56352.1" FT /db_xref="GI:28853284" FT /translation="MPAPTTLHPLFETYARFGDLNFSSLKHELPCINEYLSAFPPEIQ FT AVEGYRAVRSFLKSYAGNESTFNSYRTHVERLLLWTLIKSKVPLLEMRRTNAEEFLEF FT CLAPDPGWVKPVVKSRFIRVGTRRKLATDTYTLNPDWSPFSQSVSKEERKRAKEESRP FT ILQENYKPAQGSIAQIFAVCGSFFQHAIDEGFCEHNPFRAVKQKSKYKQRTTGEHESR FT ILTSLQWDFVLETAEQLATQNPKYERTLFIVATIFAMYLRVSDLVGRENWTPSMGDLR FT KDGAGNWWYHVVGKGNKAGKISVRDDYVENYLKRWRVHQGLSPLPGFRETTPLIATQR FT GRAGLSDRHVRLLLQEVFDRALERMQAENWADEDVSRLRAASLHWLRHTSATFDAPYR FT DMKDLQVDLRHNSLSTTQNVYYNSEDEKRAYSIKRLPMKERT" FT promoter complement(3212151..3212183) FT CDS 3213297..3214631 FT /gene="PSPTO2857" FT /note="similar to GB:X07282, SP:P10826, PID:184477, FT PID:32026, and PID:35883; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56353.1" FT /db_xref="GI:28853285" FT /translation="MSTQPMPIFETYEIFIDTDFSLRESSMVCVRDYIGNFPRSVKAH FT KGYLTARDFLRAFSDNNLTFTSYRTHVERLLLWALIIKKKPFSQLKRQDAEDYLEFCR FT NPPAEWIGTIVRGRFVTSDHTESTRGEPVIPNPKWRPFSLKRAKVFSGELKAPLNNHP FT RDLELSVDQDAAMQYKASPSTLNQIYTICSRFFEYMVEDGTVAANPFRMIKKKSLSRG FT TPQEEGTNRALTPLQWDYVLETAERMALEEPERHERTLFIVATLFAMYLRVSDIVGRP FT NWRPVMGNFRLDPDGNWWYHVVGKGNKAGKVAVRDEYISKYLTRYRRFIGLPALPGWN FT DQTPLLMTIRGRSGLSGRQVRALLQSVFDNALARMRHEEREEHEMNSLRAASAHWLRH FT TSATFDAPLRSPKDLQMDLRHSSLSTTQNVYYHSHDQERSRSVRGVGMRDRG" FT /colour=178 58 238 FT MBL 3213297..3214631 FT /gene="PSPTO2857" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X07282, SP:P10826, PID:184477, FT PID:32026, and PID:35883; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56353.1" FT /db_xref="GI:28853285" FT /translation="MSTQPMPIFETYEIFIDTDFSLRESSMVCVRDYIGNFPRSVKAH FT KGYLTARDFLRAFSDNNLTFTSYRTHVERLLLWALIIKKKPFSQLKRQDAEDYLEFCR FT NPPAEWIGTIVRGRFVTSDHTESTRGEPVIPNPKWRPFSLKRAKVFSGELKAPLNNHP FT RDLELSVDQDAAMQYKASPSTLNQIYTICSRFFEYMVEDGTVAANPFRMIKKKSLSRG FT TPQEEGTNRALTPLQWDYVLETAERMALEEPERHERTLFIVATLFAMYLRVSDIVGRP FT NWRPVMGNFRLDPDGNWWYHVVGKGNKAGKVAVRDEYISKYLTRYRRFIGLPALPGWN FT DQTPLLMTIRGRSGLSGRQVRALLQSVFDNALARMRHEEREEHEMNSLRAASAHWLRH FT TSATFDAPLRSPKDLQMDLRHSSLSTTQNVYYHSHDQERSRSVRGVGMRDRG" FT CDS complement(3248015..3248374) FT /gene="PSPTO2885" FT /note="Adjacent ORF is a truncated transposase gene of a FT multicopy insertion sequence.; similar to GP:8037784; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56379.1" FT /db_xref="GI:28853311" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPGFVA" FT /colour=178 58 238 FT MBL complement(3248015..3248374) FT /gene="PSPTO2885" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="Adjacent ORF is a truncated transposase gene of a FT multicopy insertion sequence.; similar to GP:8037784; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56379.1" FT /db_xref="GI:28853311" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPGFVA" FT CDS 3249839..3250816 FT /gene="PSPTO2887" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO56380.1" FT /db_xref="GI:28853312" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 3249839..3250816 FT /gene="PSPTO2887" FT /colour=178 58 238 FT VR_#69 3277425..3294463 FT /colour=255 255 0 FT misc_feature 3312259..3312396 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="9.3e-12" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=36.600000 FT CDS complement(3335609..3336574) FT /gene="PSPTO2966" FT /note="similar to GB:M86752, SP:P31948, and PID:184565; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56458.1" FT /db_xref="GI:28853390" FT /translation="MPQDPHTDQTARVISQPSLPDVNKPLRLYLDRLAPSSRLTMTYV FT LQDAADRLGMADVDIHDIPWHTLQPGHVTALVATLREDDYAPNTTSLYVNAIRGVMNE FT AWRHDLISHDQLLKIRSIKPVSGTRLAKGRNIRRTLIRELMEACAADPRPQGRRDAAI FT IAILYGSGMRKSESVNLDLAQIDFAERSLRVMGKGNKQLIKYAPEWAFKALNDWLELR FT RSCLQPGQGDDLFLFNRIRRGSHITRDRITKHAIYFIAKQRGRQVGVDIMPHDFRRSF FT ITRVIEEFDLSIAQKLAHHTHISTTASYDMRSENERRNVVDGFDL" FT /colour=178 58 238 FT MBL complement(3335609..3336574) FT /gene="PSPTO2966" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:M86752, SP:P31948, and PID:184565; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56458.1" FT /db_xref="GI:28853390" FT /translation="MPQDPHTDQTARVISQPSLPDVNKPLRLYLDRLAPSSRLTMTYV FT LQDAADRLGMADVDIHDIPWHTLQPGHVTALVATLREDDYAPNTTSLYVNAIRGVMNE FT AWRHDLISHDQLLKIRSIKPVSGTRLAKGRNIRRTLIRELMEACAADPRPQGRRDAAI FT IAILYGSGMRKSESVNLDLAQIDFAERSLRVMGKGNKQLIKYAPEWAFKALNDWLELR FT RSCLQPGQGDDLFLFNRIRRGSHITRDRITKHAIYFIAKQRGRQVGVDIMPHDFRRSF FT ITRVIEEFDLSIAQKLAHHTHISTTASYDMRSENERRNVVDGFDL" FT CDS 3338861..3339220 FT /gene="PSPTO2970" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56462.1" FT /db_xref="GI:28853394" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 3338861..3339220 FT /gene="PSPTO2970" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56462.1" FT /db_xref="GI:28853394" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT VR_#70 3338861..3363760 FT /colour=255 255 0 FT CDS 3339238..3340791 FT /gene="PSPTO2971" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56463.1" FT /db_xref="GI:28853395" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 3339238..3340791 FT /gene="PSPTO2971" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56463.1" FT /db_xref="GI:28853395" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT tRNA 3346191..3346276 FT /gene="tRNA-Leu-2" FT /product="tRNA-Leu" FT /note="codon recognized: UUA" FT tRNA complement(3351545..3351618) FT /gene="tRNA-Cys-1" FT /product="tRNA-Cys" FT /note="codon recognized: UGC" FT VR_#71 3385000..3397567 FT /colour=255 255 0 FT CDS 3389035..3390057 FT /gene="PSPTO3013" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56504.1" FT /db_xref="GI:28853436" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 3389035..3390057 FT /gene="PSPTO3013" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56504.1" FT /db_xref="GI:28853436" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 3390054..3390863 FT /gene="PSPTO3014" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56505.1" FT /db_xref="GI:28853437" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 3390054..3390863 FT /gene="PSPTO3014" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56505.1" FT /db_xref="GI:28853437" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT promoter 3393410..3393442 FT tRNA complement(3397753..3397828) FT /gene="tRNA-Gly-4" FT /product="tRNA-Gly" FT /note="codon recognized: GGC" FT VR_#72 3419246..3470131 FT /colour=255 255 0 FT CDS complement(3424661..3425506) FT /gene="PSPTO3044" FT /note="similar to GP:9946886, and GP:9946886; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy12, transposase OrfB" FT /protein_id="AAO56533.1" FT /db_xref="GI:28853465" FT /translation="MSIHEPVDWLCKVFEVTRSCYYARRLRRRTPDVERLRLRSRVNE FT LFTQGRSAPGSRSIMAMMQDDGEQIGRFKVRSLMRELELVSKQPGSHAYKKATVERPD FT IPNILNREFDVPAPDHVWCGDITYIWAQGKWQYLAVVLDLFARRVVGWALSGKPDADL FT VIKALDMAYEQRGKPQGLLFHSDQGSQYGSRSFRQRLWRYRMRQSMSRRGICWDNAPM FT ERVFRSLKTEWIPIMGYTTVQQAQRDISHFLMHRYNWIRPHQFNGGLPPAQAEKKLNV FT VSGIS" FT /colour=178 58 238 FT MBL complement(3424661..3425506) FT /gene="PSPTO3044" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:9946886, and GP:9946886; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy12, transposase OrfB" FT /protein_id="AAO56533.1" FT /db_xref="GI:28853465" FT /translation="MSIHEPVDWLCKVFEVTRSCYYARRLRRRTPDVERLRLRSRVNE FT LFTQGRSAPGSRSIMAMMQDDGEQIGRFKVRSLMRELELVSKQPGSHAYKKATVERPD FT IPNILNREFDVPAPDHVWCGDITYIWAQGKWQYLAVVLDLFARRVVGWALSGKPDADL FT VIKALDMAYEQRGKPQGLLFHSDQGSQYGSRSFRQRLWRYRMRQSMSRRGICWDNAPM FT ERVFRSLKTEWIPIMGYTTVQQAQRDISHFLMHRYNWIRPHQFNGGLPPAQAEKKLNV FT VSGIS" FT CDS complement(3425515..3425703) FT /gene="PSPTO3045" FT /note="identified by match to PFAM protein family HMM FT PF01527" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy12, transposase OrfA" FT /protein_id="AAO56534.1" FT /db_xref="GI:28853466" FT /translation="MRRWVDQVQQERTGVTPQSKALTPEQQKIQELEARIARLEREKS FT ILKKATALLMSEDLERSR" FT /colour=178 58 238 FT MBL complement(3425515..3425703) FT /gene="PSPTO3045" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01527" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy12, transposase OrfA" FT /protein_id="AAO56534.1" FT /db_xref="GI:28853466" FT /translation="MRRWVDQVQQERTGVTPQSKALTPEQQKIQELEARIARLEREKS FT ILKKATALLMSEDLERSR" FT CDS complement(3468470..3470131) FT /gene="hopAB2" FT /locus_tag="PSPTO3087" FT /note="also known as AvrPtoB; similar to GP:5702216, and FT GP:18535643; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAB2" FT /protein_id="AAO56576.1" FT /db_xref="GI:28853509" FT /translation="MAGINRAGPSGAYFVGHTDPEPVSGQAHGSGSGASSSNSPQVQP FT RPSNTPPSNAPAPPPTGRERLSRSTALSRQTREWLEQGMPTAEDASVRRRPQVTADAA FT TPRAEARRTPEATADASAPRRGAVAHANSIVQQLVSEGADISHTRNMLRNAMNGDAVA FT FSRVEQNIFRQHFPNMPMHGISRDSELAIELRGALRRAVHQQAASAPVRSPTPTPASP FT AASSSGSSQRSLFGRFARLMAPNQGRSSNTAASQTPVDRSPPRVNQRPIRVDRAAMRN FT RGNDEADAALRGLVQQGVNLEHLRTALERHVMQRLPIPLDIGSALQNVGINPSIDLGE FT SLVQHPLLNLNVALNRMLGLRPSAERAPRPAVPVAPATASRRPDGTRATRLRVMPERE FT DYENNVAYGVRLLNLNPGVGVRQAVAAFVTDRAERPAVVANIRAALDPIASQFSQLRT FT ISKADAESEELGFKDAADHHTDDVTHCLFGGELSLSNPDQQVIGLAGNPTDTSQPYSQ FT EGNKDLAFMDMKKLAQFLAGKPEHPMTRETLNAENIAKYAFRIVP" FT /colour=255 0 0 FT gene complement(3468470..3470131) FT /gene="hopAB2" FT /locus_tag="PSPTO3087" FT /colour=255 0 0 FT promoter complement(3470185..3470217) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT VR_#73 3475000..3482500 FT /colour=255 255 0 FT misc_feature complement(3534033..3534232) FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="2.6e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.200000 FT CDS complement(3534233..3535255) FT /gene="PSPTO3146" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO56633.1" FT /db_xref="GI:28853566" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL complement(3534233..3535255) FT /gene="PSPTO3146" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO56633.1" FT /db_xref="GI:28853566" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature complement(3535256..3535391) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.9e-60" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=198.400000 FT CDS 3586369..3587346 FT /gene="PSPTO3194" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO56677.1" FT /db_xref="GI:28853610" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 3586369..3587346 FT /gene="PSPTO3194" FT /colour=178 58 238 FT VR_#75 3600000..3679081 FT /colour=255 255 0 FT CDS 3601794..3602810 FT /gene="PSPTO3208" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO56690.1" FT /db_xref="GI:28853623" FT /translation="MAKYPNTFHRASLMKQMTFADAEYAGKRKHTRRERFLIEMDQVV FT PWKGLIALIEPHYPKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQF FT AGLSLDRIADETTILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHA FT PSSTKNKDGKRDPEMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVD FT QLLHGEETYVSGDAGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIE FT FTKAQLRAKVEHPFRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMG FT EVRL" FT /colour=178 58 238 FT MBL 3601794..3602810 FT /gene="PSPTO3208" FT /colour=178 58 238 FT CDS complement(3604010..3606985) FT /gene="PSPTO3210" FT /note="identified by match to TIGR protein family HMM FT TIGR01731" FT /codon_start=1 FT /transl_table=11 FT /product="filamentous haemagglutinin family protein" FT /protein_id="NP_792996.1" FT /db_xref="GI:28870377" FT /translation="MAQASAITSAVSAAAQTVTRVEGLPSSNFVSKPQKYLIETNPVL FT TELKQFLSSDYLLAGLGYDPEVSAKRLGDGLYEQRLVQQAVVARTGQAFIDGQTSNEA FT QFKYLMNNAIASKQQLNLAVGVSLSSQQVAALTHDIVWLEEHEVNGEMVLVPVLYLAQ FT ADGRLGPTGALIAGNDVSLIAGQNLDNVGTLRAANNLSAVAGNNLVNTGLIEAGNRLD FT LLAGNDLINTAGGIIKGRDVSLTAINGDVINERSITSMDNSARGQRHNEFADSAARIE FT AANDMSISAGRDVINKGSVLESGRDMSIQAGRDVTIAPTEVTNSLFSDSKHNSSDITQ FT LGSTASAGRDLTVQAGRDISVIASQIDAKRDIAMAATENLTISSAADEEHSLSKSKKL FT TRQEDHVSQIAADLDAGGSVALQAGQNLAVISSRITAGKEAYLVAGDQLDILAAQDSD FT YSLYDKKKKGSFGAKKTKRDEITDVKNIGSEITTGGDLLLASGGDQKYQVAKLESGKD FT LTIDSGGAVTFEGVKDLHQESHEKSKSDLAWNSSKGKGNTDETLRQSELVAKGELAIR FT AVEGLKIDIKQVDQQSVSQTIDAMVKADPQLAWLKEAELRGDVDWRQVKEVHDSLIGT FT AVNAAVVAGLTSATSQAVISTVNNKGNLGAALKDVTSAESMKGYLVSGLAAGFAAGIL FT DPAYGVSPENTAKATHGFDLGSVDGFTNYAGYTLAQGGFSAAANTAINGGSLTDNLAQ FT AAISSAADAMSAGIYNKLGTKLEFSGLPSKLAAHALVGGLIAELAGGDFRSGALAAGA FT NEAFVNLVGDKIFVGESHDKLLAMTSQLVGLTVAAAAGGTDKDQAVAGWVAQQATTFN FT YLEHSEKEAFIKEMLGCDTDKCAREKWEQGKFDEDSQANVQYANDIAGSQRARETRDR FT VLDSLGSILDMNCPTSACEGYKQLLMERSLGTLKNLNQVIKDWASVDQRLGLMAGAAV FT GGQANYKCGSTASRSAGVD" FT /colour=0 255 0 FT CW_VIR_gene complement(3604010..3606985) FT /gene="PSPTO3210" FT /colour=0 255 0 FT CDS 3609072..3609431 FT /gene="PSPTO3212" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56693.1" FT /db_xref="GI:28853626" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 3609072..3609431 FT /gene="PSPTO3212" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56693.1" FT /db_xref="GI:28853626" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 3609449..3611002 FT /gene="PSPTO3213" FT /note="similar to GP:5824139; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56694.1" FT /db_xref="GI:28853627" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 3609449..3611002 FT /gene="PSPTO3213" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:5824139; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56694.1" FT /db_xref="GI:28853627" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(3611649..3614135) FT /score=8.01e-46 FT /codon_start=1 FT /product="putative FHA" FT CDS 3616413..3616772 FT /gene="PSPTO3215" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56695.1" FT /db_xref="GI:28853628" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 3616413..3616772 FT /gene="PSPTO3215" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56695.1" FT /db_xref="GI:28853628" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 3616790..3618343 FT /gene="PSPTO3216" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56696.1" FT /db_xref="GI:28853629" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 3616790..3618343 FT /gene="PSPTO3216" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56696.1" FT /db_xref="GI:28853629" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(3621993..3623504) FT /gene="PSPTO3220" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56700.1" FT /db_xref="GI:28853633" FT /translation="MKSMPDNLPDDLQLLKQMLAKMQSRVGFLEEENALLRQRLFGRK FT SEQTADPATPQLALFNEAESVVEAIDENAEEEVVTPAKRRGKRKPLPADLPRIEVIHE FT LPEHELTCVCGCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGRRDCETAPVTADKPA FT QLIEKSMASPSVLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCGKHFQ FT PLLNLMRDRLLESRFIHCDETRVQVLKEPDREPSSQSWMWVQTGGPPDRPVILFDYST FT SRAQEVPMRLLDGYRGYVMTDDYAGYNALGAQTGVERLGCWAHARRKFVEAQKVQPKG FT KTGRADIALNLINKLYGIERDLKASSDADRKIGRHEHSLPILAQLKSWIEKTQPQVTA FT QNALGKAISYLASNWSKLERYVEEGYLPLDNNTAERAIRPFVIGRKNWLFSDTPKGAT FT ASAQLYSLVETAKANGQEPYAWLRHALERLPTATSVEDYEALLPWNCEPRLHS" FT /colour=178 58 238 FT MBL complement(3621993..3623504) FT /gene="PSPTO3220" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO56700.1" FT /db_xref="GI:28853633" FT /translation="MKSMPDNLPDDLQLLKQMLAKMQSRVGFLEEENALLRQRLFGRK FT SEQTADPATPQLALFNEAESVVEAIDENAEEEVVTPAKRRGKRKPLPADLPRIEVIHE FT LPEHELTCVCGCRKHAIGEEVSEQLEIVPMQIRVIKHVRKVYGRRDCETAPVTADKPA FT QLIEKSMASPSVLAMLLTTKYVDGLPLHRFEKVLGRHGIDIPRQTLARWVIQCGKHFQ FT PLLNLMRDRLLESRFIHCDETRVQVLKEPDREPSSQSWMWVQTGGPPDRPVILFDYST FT SRAQEVPMRLLDGYRGYVMTDDYAGYNALGAQTGVERLGCWAHARRKFVEAQKVQPKG FT KTGRADIALNLINKLYGIERDLKASSDADRKIGRHEHSLPILAQLKSWIEKTQPQVTA FT QNALGKAISYLASNWSKLERYVEEGYLPLDNNTAERAIRPFVIGRKNWLFSDTPKGAT FT ASAQLYSLVETAKANGQEPYAWLRHALERLPTATSVEDYEALLPWNCEPRLHS" FT CDS complement(3623523..3623882) FT /gene="PSPTO3221" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56701.1" FT /db_xref="GI:28853634" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKPRNRVKILYWERNGFCLWLKRLESERFKTSPDATDEAIVLTVQELNWLLDGF FT DLWRNRPHQVLTPRFVA" FT /colour=178 58 238 FT MBL complement(3623523..3623882) FT /gene="PSPTO3221" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO56701.1" FT /db_xref="GI:28853634" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKPRNRVKILYWERNGFCLWLKRLESERFKTSPDATDEAIVLTVQELNWLLDGF FT DLWRNRPHQVLTPRFVA" FT CDS 3624316..3625293 FT /gene="PSPTO3223" FT /note="similar to GP:8885851, and GP:1196750; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="IS52, transposase" FT /protein_id="AAO56703.1" FT /db_xref="GI:28853636" FT /translation="MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWAQLEAQVAPFYS FT NTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPD FT ATTLLRFRRLLETHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGK FT RDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYV FT SGDAGYTGAAKRPEHAERDVIWSIAARPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKV FT EHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQAAG" FT /colour=178 58 238 FT MBL 3624316..3625293 FT /gene="PSPTO3223" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:8885851, and GP:1196750; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="IS52, transposase" FT /protein_id="AAO56703.1" FT /db_xref="GI:28853636" FT /translation="MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWAQLEAQVAPFYS FT NTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPD FT ATTLLRFRRLLETHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGK FT RDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYV FT SGDAGYTGAAKRPEHAERDVIWSIAARPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKV FT EHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQAAG" FT CDS 3625392..3626414 FT /gene="PSPTO3224" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56704.1" FT /db_xref="GI:28853637" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 3625392..3626414 FT /gene="PSPTO3224" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56704.1" FT /db_xref="GI:28853637" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 3626411..3627220 FT /gene="PSPTO3225" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56705.1" FT /db_xref="GI:28853638" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 3626411..3627220 FT /gene="PSPTO3225" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56705.1" FT /db_xref="GI:28853638" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(3629677..3648501) FT /gene="PSPTO3229" FT /note="The amino terminal half of this protein consists FT large of repeats of 310 residues. Each copy contains a FT number of weak repeats of a 20-residue sequence.; similar FT to SP:P12255; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="filamentous hemagglutinin, intein-containing, FT putative" FT /protein_id="NP_793014.1" FT /db_xref="GI:28870395" FT /translation="MDVHQLALLARQPSAVLTERRSFWGMPKRGLALILANAMFWQPL FT LVQAEGIVVSGPNTSLSQAGNGVPIVNIATPNASGLSHNQYQQFNVESQGVILNNSTN FT QTQSTQLGGIIVGNSNLRGTAATTILNEVVGANASQLKGYTEVAGQAARVIVANPYGI FT SCNGCGFINTPQVTLTTGKPVLDANGQLQRFNVQGGSISIDGVGLNADNVDQFDIITR FT SAKINAELHARRLNIIAGRNDVDAQTLNATALADDGGAKPELAIDSSALGGMYAGTIR FT LVGTEAGVGVRLAGNLAASGGDIQIDANGHLNVMQTAASAAVTVKANSAEVNGPVYAG FT ASLAVTTAGDLVTRQNVAARDALTLSAGGQLNNSAVIEAGVNADNSRNGSGDVTLSAN FT GLSNSGSITASRALQATVTQVLNNQGATLNGQASTRIAAAAIDNRQSGRILSQSGSVD FT INASQVLNSQSGLISSSGSLTITAGSLDNSQQGKLSSSSALSARISGQFLNQLGLVSA FT NGYLLLNAATLDNRSAEISSLGNLTSTVGQFNNSEKGRLLANGSLQLTSDTLNNQNGS FT LAGQQNVQLTLGQLTNTGNGSVYGKNNLNLTLNGALNNDQGALRSDGTLDVRAASLSN FT NSGSTTSAGAASVTTSGAVVSRGGQILSDAGLTLISGSLDNSQSGRIAGNGVVLSTGA FT FDNQRSGNLSSTGTLQLTAAQVNNSDAGRIASAMALTAVVTGLNQTNDGRVYSNTDVS FT LDLSNGLLTNQGGLINAPGQLVLKNLNVVNNQSGKISSANGFTLAATSLDNTDGSLLS FT DKALVVRVNQLLTNLRGLVSATGLDLTAGSLNNRNGEISSLGGLTANIGQFDNREKGR FT LLANGALLLTADGLNNLNGIVSGQQGVQLNLGQLDNTGSGSLYAKSSLGLNVSGTLNN FT DQGVVRSDGTMDLKAAGLANTNGSVTSAGTGVLNFNGAAVNQGGQIVSDAQLTLTSGS FT LDNSQRGRIAGNGVLLSTGTFNNQQGGSLSSTGALRLTAGQVDNSAAGRIASAMALTA FT VVTGLNQTNDGRLYSNSDVSLDLSNGLLTNQGGLINAPGQLVLKNLSVVNNQSGKISS FT ANGFTLAATSLDNTDGSILSDKALVVRVNQLLTNLRGLVSATGLDLTAGSLNNRNGEI FT SSLGNLTANIGQFDNREKGRLLANGALLLTADGLNNLNGVVSGQQAVQLNLGQLNNTG FT AGSLYAKNALNLTLGGVLANDQGVVRSDGTMDLKAAGLANTNGSVTSAGTGVLNFNGA FT AVNQGGQIVSDAQLTLTSGSLDNSQRGRIAGNGVLLSTGTFNNQQGGSLSSTGALRLT FT AGQVDNSAAGRIASAMALTAVVIGLNQTNDGRLYSNTDVSLDMSNGLLNNQSGQISAP FT GQLLLKNLNVVNNQSGKISSANGFTLAATSLDNTDGSLISDKALIVRINQLLNNVRGQ FT ISASGVTLSAATLDNRNAELSSLGNLTANIGQFDNREKGRLLANGALLLTADGLNNLN FT GIVSGQQGVQLNLGQLTNTTGGSIYAKSSLGLTVIGAVNNDQGVLRSDGSLTLRAASL FT TNNAGSISSAGVASINVDGDVVNRGGQVLSDATLTLTSASLDNSQSGRIASKGLVLTT FT GVFDNHQDGRLTSTGELQLNAGLVNNSDAGRIASAMALTAVVTGLNQTRDGRLYSNSD FT VSLDLSNGVLTNQGGLINAPGQLLLKNLTSVSNRKGEISSANGFTLAATSLDNTEGSL FT LSDKALVVRINQWLTNLRGKISANGVNLSAATLDNRNAELSSLSTLTATLGGFDNTDK FT GRLLANGALLLTADTLNNQNGIVSGQQDMQLNLGQLSNTGAGSVYAKNRLGLTLTGAL FT NNDQGVLRSDGALDLKAGSLANTGGSVTSAGVSGLATDAAVVNQGGQILSDATLTLTS FT ASLDNSQSGRIASKGLVLTTGAFDNHQDGRLISTGTLQLNAGQVNNSEAGRIASAMAL FT TAVVTGLDQTSDGRLYGNGDVSLDLSNGVLTNQGGQLSAPGQLLLKNLSSVNNRSGKI FT SSANGFTLAATTLDNTAGSVISDKALIVRIDQLLTNLRGLISATGVELNAATLDNRNA FT ELSSLGKLTATVGQFDNSGKGRLLANGALLLTADNLNNQGAGAVSGQQEVQLTLGQLT FT NIGSGSVYAKNTLGLTVSGALNNNQGVVRSDGTLDVSGASLANTAGSITSTGVSVLKV FT DGAVVNRGGQILSDSTLSLSSASVDNSQNGRIAGKGVTLATGAFDNQQGGRLTSTGTL FT KIDAGQVNNSDAGRIASAMALTAVVTGLDQSNDGRLYGNGDVSLDLSKGVLNNQGGLI FT TAPGQLLLKNLTSVNNQNGEISSAKGFTLAATSLDNTAGSVLSDSALIVRVDQLLTNL FT RGLVSGNGIDLTANELNNQSGSVSSDADLLLTIAGTLSNQKGELTSAGNTTLNALSLA FT NANGQVMADRFLKLVITDAIDNQAGTLGAGKGADIRAVSLDNRQAGALVTDGQLDLTL FT TDALDNRASGSLQAKGLMNLTSQTLDNRGGRITAQNMLMVRSASVDNRGGAIRAEKGL FT QLFVDALDNSQSGLSTAQKGLINSNAGLELVGTRLDNQNGLLNAAGLMQLQADSVLNG FT SGRIASQADLVAHIGGLTQQGGELVAQGNLTLTGNILDNQSGGLVGSTKALKIDVADI FT DNKAGELSSQIGVEIIAQTLDTSNGGKVLAGTALGLTVARLINLNKGLLFGNTLRLEG FT TRLDNAGGTLASQQDLNIGLSGALDNTGGLLSSESAMTVSAASLQNAAGSLSSADALS FT VTTTGALSNQAGSITTDAALTLTSASLDNSKAGKLSGKGATQVTTGTFDNSQNGRLTS FT SDTLRLTAGKVINQSAGRIASALALTASVTSLDQQAGELFSNTSLSLDLNNGQLNNQG FT GLINASGVLLLKNLNGIANQNGEISSAQAFSLNASSFDNSGGKLLSSQALTLVVNKAL FT SNLKGNISGASLNINSDSLDNTQGMISSRAGLDVTVNTALTNAQGTLIGDGNVNLSAA FT TADNRQGQMASKQNLDAQIGNLQQQNGQMLAQGTLTLRGDTLDNRQNGFIGATQALAI FT NVTNIDNRGGELSSQDTMTLTGQQLNNSDKGQVLAQKALTLNIAQTTNRANGLLSSQA FT GLTLIGSTLDNTGGALSALKALGIDLSAALDNSQGLISGEDILTLNAGSLTNTAGSVS FT SAANLKLDSAGAISNQGGKLVTDGALNLTSTRLDNSQRGTISGKGLLTLKTGNFDNSQ FT NGRVSSNDRLELTSAQLTNSSGGSIGSSQALTASVSRLSQQGGKLFSNTSLSLDLNNG FT QLDNQNGLINAPGALVLKNVNEVLNQNGEISSAQAFTVNAQQLNNTGGKLLSNQLLTL FT RIARALNNVKGMIAAAGVDAVVNTLDNTGGTLTSRNDLGLTVAGLLTNRDNGLINATQ FT ALKVGAASLDNQNGQVLGGTSLILNATSINNTAKGLINSTGTLNLTAGSLDAGNGGEV FT SAARDMTLVLNALSLNGGRVMGDAGLSIDMVGNDLNNLGGLITADGQLTFSRLRDLNN FT QSGEVSSAQSFTLSGRTLDNSSGKLISSNVLTVGATNLLNQNGLISGWQGLNVSGNRL FT DNRNSGTLSSRSGNLVTTLTGELLNGGNGALVSQNTLSVTADSLDNSGGILSSGTGQT FT LTVSGLLNNSQNGLIDSGAGLVINANALNNAAGNMTAQQDVSFGGSSLDNSAGNLSSK FT GAMTLDLLGSLTNTRGKLASGGTLLLRRSTAINNQAGQLISQSLMTLNTSGQLDNSNR FT GTVAANNTLTVVASGNVLNDADGLIYSQSANAHVQAASLSNVRGTVQSVGALRVDVVG FT DVNNQNGRIIAQGGDLNVSAANLYSQGGVLSSLQGLFTASVTGVLKNGYDANRQGGVI FT QAQRLNLTALSSFDNYGGRVSARTGEALINTASFDNRNGGLYAKGLVRVTGGNFDNSG FT DNDGQIAGGQVELNLSGALNNRFGIIESDSTLAVTAQSLDNQTGQLRALGGGGATNFQ FT IGNLFDNRNGTLESANSDLILNAGSFLNGGGSLLHTGNGTFDISTANLTNAGGSIVTR FT GGLTLTADSWTNSSVIQAGRLTVNVGTLNQTAGGQLLASSLFSGSGSNWTNDGLIASD FT GSLSLNLGGTYGGNGRLSSVGTLGLSAAQVNLNAASTIAGGGDTSVSVGGQLSNVGRL FT TSATNLTVNAGSINNQGTLGSGQALTVTTGSLVNDRGLIFSGSNMSLRVSSLNNSYAN FT IYSLGNLTIDRNGQGALADSIVNSSASIQSDGSMSLAASTIQNIRAILTTSNGGIYSA FT MIKEGACNREFYNNDCKTSTQTHTWDVTQREKLEVTAASAASGIAAGGSLSMNGGDLL FT NQSSTIATGGNFTATLNNLTNTGVEASDTETVTVYRSMRTSNASMWTKAAQDFTDKYW FT LGSSGYDASLTGLQAALADFVRITETDMPEFYKVTRLSNGDQSYAAVIQAAGAVNVNA FT QNDINNSVVRAGYTYVSGGSRTDTNAPGTQFSTRITVNQQLPPDLAQQQVNPLSLPGF FT SLPTGQNGLFRLSGQSGTAVAVAQPVGLPQSWTMGSAAVSVAQREQTVSDAQASTIQI FT GSVSQISNAARQLASVTRQSAGVSANASAFDTSAPGAAPIGGLVLPGHTSDSAGVTSV FT DSVTGIATGNQGSGVLLPVQNTGSTSGLPTITAISSGNSAAQNAGRVQGTQVSQAGQV FT VNGTQGSLVSAINQATTGVQSGTTATVTQVVVNAQGGQVIAPVRNPVATQGGPLVTSV FT GNPAVSQGVSVAAPVRNTVAAQGGPVTAAVLNPVVTQTNPVSATQNTSNQPATVAQAS FT AITPVVSAAAQTVTRVEGLPSSSFVSRPQKYLIETNPVLTELKQFLSSDYLLAGLGYD FT PEVSAKRLGDGLYEQRLVQQAVVARTGQAFIDGQTSNEAQFKYLMNNAIASKQQLNLA FT VGVSLSSQQVAALTHDIVWLEEHEVNGEMVLVPVLYLAQADNRLGPTGALIAGNDVSL FT IAGQNLDNVGTLRAANNLSAAAGNDLVNSGLIEAGNRLDLLAGNDLINKAGGIIAGRD FT VTLTAIRGDVINERTVTSHQSAADDATWRKDFADSAARIEAANDMSLQAGRDVKNTGG FT VLQAGRDLSIAAGRDVAIDSAQTENGQTRGANSSNSSITQLGSTVSAGRDLTAQAGRD FT INVIASSIDAKRDIAMAATENLTLSSAADEQHSYGKSKKVTEQEDHVSQVSADLKAGG FT SVALQAGQNLAVISSRITAGKEAYLVAGENLDILAAQDSDYSLYDMKKKGSFGAKKTQ FT RDEITDVKNIGSEITTGGDLLLSSGGDQKYQVAKLESGKDLTIESGGAVTFEGVKDLH FT QESHEKSKSDLAWNSSKGKGNTDETLRQSELVAKGEVAIRAVQGLKIDIKQIDQQSVS FT QTIDAMVKADPQLAWLKEAELRGDVDWRQVKEVHDSFKYDNSSLGQGAMLAIIIVVTV FT LTAGAGTFAAAGTAAGSAATGAATAAGVSATTAATIGTAANAAAVASLTSITAQGVVS FT TINNKGNLGAALKDTFSSDSLKSAAISGLTAGFTAGVIDPQLGGTTKPFNSLTKGFDL FT STLGGAGGFALHAGAQGLASGAINTAVNGGSLGDNLVNGLVSQAGTVAAAIGFNQVGS FT FADQKFTEATLAGDVSGKAMWAEGGIGRTTLHALMGGAVSSATGGDFTTGAVAAGASQ FT AMAGTLNEVFKNNPEYRQAAAQIVGLTAAGLAGGDVEKAAWVSAMADQYNRQLHPNEI FT PLLEKQSSSLAQEANISPAEAEKRLAQALAYYTDKDWNNALAAKGVVPDALTLKHLGI FT ALSPLADSYAVVGDVPVVAGSKSYTPAETVALITEYRNTHTAEYADPSINNLNMQGAY FT AGDPKYQYADFYRKNLAVKTDFLSAVSGNLAGIAQGSGGALSDSLGSAWALMSDPVGV FT SEQAANGLMGLSKSPWGSFKNSVEASQTKEAMATIYDMQGNTAASAAIRAKSDLEFAL FT NFLPANRAKTLAELGAGRKFAMDGPCCFAAGTMVSTPDGERAIDTLKVGDIVWSKPEG FT GGKPFAAAILATHIRTDQPIYRLKLKGKQENGQAEDESLLVTPGHPFYVPAQHGFVPV FT IDLKPGDRLQSLADGASENTSSEVESLELYLPVGKTYNLTVDVGHTFYVGKLKTWVHN FT TGPCELPEGYFGAAGGNGPKATATSAAEGATPRVSIDPPDGSFSISDWTGYPAGVPVP FT QGPFRLLEGTEYNAARNVANKANSALRREQGLVGQPVDVHEINPVKFGGSPTDSANKV FT ILPRDVHRQQVTPWWNQLQKDLGK" FT /colour=0 255 0 FT CW_VIR_gene complement(3629677..3648501) FT /gene="PSPTO3229" FT /colour=0 255 0 FT tRNA complement(3657062..3657137) FT /gene="tRNA-Asn-2" FT /product="tRNA-Asn" FT /note="codon recognized: AAC" FT misc_feature complement(3685924..3686055) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="4.4e-09" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=27.800000 FT promoter 3693598..3693630 FT misc_feature complement(3699163..3699300) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="2.7e-13" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=41.700000 FT misc_feature complement(3699660..3699859) FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="2.6e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.200000 FT CDS complement(3699860..3700882) FT /gene="PSPTO3274" FT /note="identified by match to PFAM protein family HMM FT PF01548" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO56752.1" FT /db_xref="GI:28853685" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDNALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL complement(3699860..3700882) FT /gene="PSPTO3274" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01548" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO56752.1" FT /db_xref="GI:28853685" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDNALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature complement(3700883..3701018) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="3.4e-61" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=200.900000 FT VR_#76 3715000..3725000 FT /colour=255 255 0 FT CDS 3721153..3722367 FT /gene="hopAH2-1" FT /locus_tag="PSPTO_3292" FT /note="identified by match to PFAM protein family HMM FT PF00150" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAH2-1" FT /protein_id="AAO56770.1" FT /db_xref="GI:28853703" FT /translation="MNINSIRSYDLSMAAPEKSAVTNKATLPVNAGNNDAPTTRQSKL FT DTYTASHKYDSSGRPAEAPETAPVYTKALLNRNAQLQKSAAPSDTAPAGQQQVATAVT FT KNALQSNAVTVEEKVSGPTPNASNADTGSHGGANVDPGDIATPAAATKMIQDLKGIGG FT GTLRIQMTHDQIQDTKEMDKLTALVNEGDKQGVKVQFTFRDNANGGGGSVLTGDKLNQ FT ASTDISNVVKKFGGHSSFVLDTFNEGGTSATQGWADMESTLIKSARNAGYKGSIVVED FT SNWGGGLTAGPESGLVKYADQLKAANGKGNPGLIGSIHEYASGADASARLGNEIKALQ FT NAGYKPQIGEVGNANWLGGDKFEERDGATKAVRDNLAALKAAGADILPWKDQFQDGKL FT RHHVGFSKSDQY" FT /colour=255 0 0 FT gene 3721153..3722367 FT /gene="hopAH2-1" FT /locus_tag="PSPTO_3292" FT /old_locus_tag="PSPTO3292" FT /colour=255 0 0 FT CDS 3722818..3724068 FT /gene="hopAH2-2" FT /locus_tag="PSPTO_3293" FT /note="identified by match to PFAM protein family HMM FT PF00150" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAH2-2" FT /protein_id="AAO56771.1" FT /db_xref="GI:28853704" FT /translation="MNIHTARSYDPLMATSEKPATADRTTRAVDAGATEPTPEKQAKL FT DTYTASDSRSAETAEGSPVYTRMMLSRNTRSLESEDSSSDTALLASQKALVSQNDTKA FT VGSEVAAVKDSTALSDAEKKAKEAEKAASTEAAKTAQTVARGGANVNPDDIATPAAAT FT KMIQDLKAIGGGTLRIQMTHDQIRDVKQMDKLRALLNEGGKQDVKVQFTFRDNANQGS FT GNVLTGDKLKQAAADISSVVKKFGSRPGFVLDTFHQGGNSASQEWSDMQTTLIKSARN FT AGFKGSIVVEDSNWGGGLTAGPQSGLVKFADQLKAANGEGNPALIGGFHVYARESEAS FT SRLGKQIKALQEAGYKLQIGEVGNASLLIGSTFRQKDDATKAMTDNMAALKAAGADIL FT PGKDQFQDGKLRRRVGFSKSDQYS" FT /colour=255 0 0 FT gene 3722818..3724068 FT /gene="hopAH2-2" FT /locus_tag="PSPTO_3293" FT /old_locus_tag="PSPTO3293" FT /colour=255 0 0 FT CDS 3738804..3739646 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3305" FT /old_locus_tag="PSPTO3305" FT /product="hypothetical protein" FT /note="identified by Glimmer2; putative" FT /db_xref="UniProtKB/TrEMBL:Q87ZW7" FT /protein_id="AAO56783.1" FT /translation="MYRRLIPRPPTRRYCCSSASVRISVTRTRQTAMDAAPRTSKFYAI FT LAKISISVTGMIGAMWSIFTYFFPDPAVLGLRVDFINWKTLIIIVSTAMMLCGLYIAFL FT ARKLPSALKLGVWLALALFLCAVFFKLGGEYAKPSIDFARSQTLFTENDNANIFGKRSE FT NVDNLDIELLGCDQNGQSPTCTLELTNRSADRDFRFVNPISLFEETGGALGLSQMRVGD FT AKSDRWDNFQLIRNVPTRVTLTFEAAKGKVKQSPALKLSFRDRENKDNVLKFNEVKVN" FT gene 3738804..3739646 FT /locus_tag="PSPTO_3305" FT /old_locus_tag="PSPTO3305" FT CDS complement(3739697..3740419) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3306" FT /old_locus_tag="PSPTO3306" FT /product="phospholipase/carboxylesterase family protein" FT /note="identified by match to PFAM protein family HMM FT PF01738" FT /db_xref="InterPro:IPR003140" FT /db_xref="UniProtKB/TrEMBL:Q87ZW6" FT /protein_id="AAO56784.1" FT /translation="MLKFFAALLFAVATMAQAQDNTLHTDLPLDYLAQANVETPDRPLV FT IFIHGYGSNAADLFGLKEHLPAGFNYLSVQAPVELQADSYKWFTQKKGGTDYDGVTEDL FT KSSGKRLTDFITQATEKFRTQPGKVFLVGFSQGAMMSYEVALRQPTLVGGFAALSGRLL FT PVVKSEVNASDDLKALKVFIGHGVQDRQVAYASGPQAEATLKSLGLTPQFHGYEGLGHS FT INEAEVVDLANWLQQSSR" FT gene complement(3739697..3740419) FT /locus_tag="PSPTO_3306" FT /old_locus_tag="PSPTO3306" FT CDS complement(3740495..3742786) FT /codon_start=1 FT /transl_table=11 FT /gene="gspD" FT /locus_tag="PSPTO_3307" FT /old_locus_tag="PSPTO3307" FT /product="general secretion pathway protein D" FT /note="similar to SP:P29041; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87ZW5" FT /db_xref="InterPro:IPR001775" FT /db_xref="InterPro:IPR001814" FT /db_xref="InterPro:IPR004846" FT /db_xref="InterPro:IPR005644" FT /db_xref="InterPro:IPR013356" FT /db_xref="UniProtKB/TrEMBL:Q87ZW5" FT /protein_id="AAO56785.1" FT /translation="MLCLATAVALGGCASQPDTLDPDNGMLQEALQGTGSQRPPVDPRS FT ERPPVEPPSQQTAASPQRQIIKGNQPFIRQPAAAPAARPAEAGDIVFNFTNQPIQAVIN FT SIMGDLLHENYSIAQGVKGDVSFSTSKPVNKQQALSILETLLSWTDNAMIKQGNRYVIL FT PSNQAVAGKLVPEMPVAQPAAGMSARLFPLRYISATEMQKLLKPFARENAFLLVDPARN FT VLSLAGTPEELANYQDTIDTFDVDWLKGMSVGVFGLQRASVGELMPELQKIFGPQSGMP FT LAGMVRFLPIERTNSVVAISSQPEYLREVGEWIHTIDEGGGNEPQMYVYDVRNMKATDL FT AKYLRQIYGTGAIKDDSPAKVAPGLRTTTLSSLNSSGGSGSGGMSSSSGLGGNSSGMSN FT GMSNGGGFGNSQGMNNSQNSADSESEGDDQSGSEADSSSQDDSGSNAGSKSLDASTRIT FT AQKSSNQLLVRTRPAQWKEIESAIKRLDNPPLQVQIETRILEVKLTGELDMGVQWYLGR FT LAGNSGTTGNVTNTPGSQGSLGTGGAALAATDSFFYSFVSNNLQVALRALETNGRTQVL FT SAPSLVVMNNQQAQIQVGDNIPISQTSINTNTATNTTLSSVEYVQTGVILDVVPRINPG FT GLVYMDIQQQVSDADTGTASTDLNGNPRISTRSVSTQVAAQSGQTVLLGGLIKQDNSET FT VSAVPYLGRIPGLKWLFGNSSKSKDRTELIVLITPRVITSSSQARQVTDDYRQQMQLLK FT PEVSRTSMQN" FT gene complement(3740495..3742786) FT /gene="gspD" FT /locus_tag="PSPTO_3307" FT /old_locus_tag="PSPTO3307" FT CDS complement(3742834..3743361) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3308" FT /old_locus_tag="PSPTO3308" FT /product="general secretion pathway protein N, putative" FT /db_xref="UniProtKB/TrEMBL:Q87ZW4" FT /protein_id="AAO56786.1" FT /translation="MTGSLRPLEWSLLALAALLTGLIALIFSGAAHSPDWLPEQAPRNP FT LDQKAQVHSAPSATLDSLANTWKTPLFSPDRSPDAAVRKAEQATSLAGLTLTGVIMDGS FT LRVALIKQASGPALKIRQGDRLPNGWTLDRLEPTQATFKLDERTQILRLPALRLPPPSS FT TPPITLTNDSTL" FT gene complement(3742834..3743361) FT /locus_tag="PSPTO_3308" FT /old_locus_tag="PSPTO3308" FT CDS complement(3743358..3743969) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3309" FT /old_locus_tag="PSPTO3309" FT /product="general secretion pathway protein M, putative" FT /note="similar to GP:496290; identified by sequence FT similarity; putative" FT /db_xref="UniProtKB/TrEMBL:Q87ZW3" FT /protein_id="AAO56787.1" FT /translation="MRRPLTSRERRGAALMILALVLCLAYWLFIDSWFAGPLRDISEQT FT EQLREQQQRYAGLLQQGDSLREQLEQARRDPASSTSLLPGEDPSAVAADLMQRIADLIS FT SQASTGGGCELTQRMPITPEQDSAEPYRQVKVSLTLNCAIEPLTAILHALEYQRPFLFV FT DEMSMRRDANAPATGAAGKLVVHLLVRGYLQPASAGEGEQ" FT gene complement(3743358..3743969) FT /locus_tag="PSPTO_3309" FT /old_locus_tag="PSPTO3309" FT CDS complement(3743950..3745014) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3310" FT /old_locus_tag="PSPTO3310" FT /product="general secretion pathway protein L, putative" FT /note="similar to SP:P34027; identified by sequence FT similarity; putative" FT /db_xref="InterPro:IPR007813" FT /db_xref="UniProtKB/TrEMBL:Q87ZW2" FT /protein_id="AAO56788.1" FT /translation="MNSSVSARLAPVYALREQVARQWRGSPAQHGWQWWVTELRACLPP FT RLSRWLGRETLEHVSAWPLVEPLPAASGEMRRVLLLPASAVLVQTLQLPAAAARNLSTV FT VGYELDRFTPFDAGQLYFVARQDSRSASFVQVTLVAILRERLDAILSECAERGLRPDAV FT DVGSEGQRMGIDLLPMPLRPQQSRSGHRLQRWLGWLCAALLLTAMLLWLNDRQSLLDDM FT QASVKAQKAQVGEIQQLRQQLTNTLGAANYLLRRKATQPPLSALLSELTACLPSDTWIE FT HLEISDSAEVAFSGQSAKASALIGRVKDCRSLDNAQFQGVIQPDTKTGKDQYSLRAHLH FT QNLHQENADAPSTD" FT gene complement(3743950..3745014) FT /locus_tag="PSPTO_3310" FT /old_locus_tag="PSPTO3310" FT CDS complement(3745011..3745745) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3311" FT /old_locus_tag="PSPTO3311" FT /product="general secretion pathway protein K, putative" FT /note="identified by match to PFAM protein family HMM FT PF03934" FT /db_xref="InterPro:IPR005628" FT /db_xref="UniProtKB/TrEMBL:Q87ZW1" FT /protein_id="AAO56789.1" FT /translation="MTASNKKQQGVALLVVLWVLALLSLLLGGLAGWVQLESRQALWLR FT QNTQALLAAEAGMNMAVQGLLDPAQRKRWIADGRLVSLRMDDAQLVVSIRSERGKLDLN FT SAPVADISRLLQACGATRNQASGIAQVLEAQRNGGQSPLRVVEEVRQLPGMNQALYARL FT LPEITLWSGLDRPDPAFASALLRRALNLPNQSAVGADPGEVLAIDSRAEQPGGVIALLQ FT TTVLLSPSEGSAQPYRVLRWQE" FT gene complement(3745011..3745745) FT /locus_tag="PSPTO_3311" FT /old_locus_tag="PSPTO3311" FT CDS complement(3745742..3746374) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3312" FT /old_locus_tag="PSPTO3312" FT /product="general secretion pathway protein J, putative" FT /note="similar to SP:P31740; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87ZW0" FT /db_xref="InterPro:IPR001120" FT /db_xref="InterPro:IPR002416" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:Q87ZW0" FT /protein_id="AAO56790.1" FT /translation="MRRTQRGFTLLEVLLVISLLGVLLVLVAGALLGANRAVLKAERYT FT VNLDKTRAAQAFLRSSISQALPLDTSAEDDVNSGFFEGSAQQLRFVATLPGELGGGIQV FT HSLELKGPQGHRALQVSFAQVQSGANGVALKPWGEPQVLLQNVESLTFSYRGLNPKGKP FT TGWVPEWPWPNRLPGAVRIDMQTRGTVKWVPEVVALRLDLSGGAGGE" FT gene complement(3745742..3746374) FT /locus_tag="PSPTO_3312" FT /old_locus_tag="PSPTO3312" FT CDS complement(3746371..3746754) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3313" FT /old_locus_tag="PSPTO3313" FT /product="general secretion pathway protein I, putative" FT /note="similar to SP:P31738; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87ZV9" FT /db_xref="InterPro:IPR002416" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:Q87ZV9" FT /protein_id="AAO56791.1" FT /translation="MKTSQSGFTLLEMLAALTVMAVCSGVLLVAFGQSARSLQQVSRSD FT RLSHAARTIMDQESTGPLENGTRQGTLAGIDWTLDIRQLPGANGQTRMFRLDLMVSEHQ FT RKAQFSTLKLRGAVSGAAGGAGS" FT gene complement(3746371..3746754) FT /locus_tag="PSPTO_3313" FT /old_locus_tag="PSPTO3313" FT CDS complement(3746754..3747188) FT /codon_start=1 FT /transl_table=11 FT /gene="gspH" FT /locus_tag="PSPTO_3314" FT /old_locus_tag="PSPTO3314" FT /product="general secretion pathway protein H" FT /note="similar to SP:P31736, and SP:P31736; identified by FT sequence similarity; putative" FT /db_xref="GOA:Q87ZV8" FT /db_xref="InterPro:IPR002416" FT /db_xref="InterPro:IPR010053" FT /db_xref="InterPro:IPR012902" FT /db_xref="UniProtKB/TrEMBL:Q87ZV8" FT /protein_id="AAO56792.1" FT /translation="MRTSVASRGFTLMEMLVVLVLMSIAVGLVGFGLQQGLSTASERRA FT VGDMVEALRATRVRAIVTGQPARTEFDLHKATFKAPGKREMHWPQSLRVTMQTSSDLGS FT SVEFYPDGGSSGGNVVVADGDRRWRIDIGWLTGSVQIRSL" FT gene complement(3746754..3747188) FT /gene="gspH" FT /locus_tag="PSPTO_3314" FT /old_locus_tag="PSPTO3314" FT gene complement(3747197..3747628) FT /gene="gspG" FT /locus_tag="PSPTO_3315" FT /old_locus_tag="PSPTO3315" FT CDS complement(3747654..3748856) FT /codon_start=1 FT /transl_table=11 FT /gene="gspF" FT /locus_tag="PSPTO_3316" FT /old_locus_tag="PSPTO3316" FT /product="general secretion pathway protein F" FT /note="similar to GB:J02854, SP:P19105, SP:P24844, FT PID:188586, and PID:829623; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87ZV6" FT /db_xref="InterPro:IPR001992" FT /db_xref="InterPro:IPR003004" FT /db_xref="InterPro:IPR011850" FT /db_xref="UniProtKB/TrEMBL:Q87ZV6" FT /protein_id="AAO56794.1" FT /translation="MSLFKYRALDAQGAAQNGTLEARDQDAAIAALQKRGLMVLQVDVA FT GLGGLRRVLGSGLLNGAALVSFTQQLATLLGAGQPLERSLGILLKQPGQPQTRALIERI FT REQVKAGKPLSVALEEEGSQFSPLYISMVRAGEAGGALESTLRQLSDYLERSQLLRGEV FT INALIYPAFLVVGVLGSLALLLAYVVPQFVPIFKDLGVPIPLITEVILDLGQFLGDYGL FT AVFASLIALIWGMAIRMRDPQRRERRDRRLLGIRVIGPLLQRIEAARLTRTLGTLLTNG FT VALLQALVIARQVCTNRALQAQVGQAAESVKGGGTLASAFGAQPLLPDLALQMIEVGEQ FT AGELDTMLLKVADVFDVEAKRGIDRMLAALVPALTVVMAGMVAVIMLAIMLPLMSLTSN FT I" FT gene complement(3747654..3748856) FT /gene="gspF" FT /locus_tag="PSPTO_3316" FT /old_locus_tag="PSPTO3316" FT CDS complement(3748853..3750610) FT /codon_start=1 FT /transl_table=11 FT /gene="gspE" FT /locus_tag="PSPTO_3317" FT /old_locus_tag="PSPTO3317" FT /product="general secretion pathway protein E" FT /note="similar to GB:X52541, GB:M80583, SP:P18146, FT PID:182263, and PID:31130; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87ZV5" FT /db_xref="HSSP:P37093" FT /db_xref="InterPro:IPR001482" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR007831" FT /db_xref="InterPro:IPR013369" FT /db_xref="UniProtKB/TrEMBL:Q87ZV5" FT /protein_id="AAO56795.1" FT /translation="MSLRSSKMPSFMPSVPVDVSRLLIPDAEQVCAWLIENAGLKTADL FT ERAQRLQQESEGTELLGLLTRLGLVSEFELARAWAALLQAPLLLADAVPPLLDPLPPLT FT ERFMRHYQVVPVGWSDQGLQVLSANPGTLYPFQAIAYACEVPVRLSIGPRNEVETLIER FT YYGQGRSAMGTLIENLDDEGGSLEDIEHLKDLASEAPVIRLVNLILQRAVEQRASDIHI FT EPFESQLKVRYRIDGVLHEAEAPPSSSSAAVISRVKIMARLDIAERRLPQDGRIMLRIQ FT GKELDLRVSTVPTSFGESVVMRLLDRQTINFDFPSLGFDGERLDEFLDVLERPHGILLV FT TGPTGSGKTTTLYTALSRLNTAERKIITVEDPVEYQLEGINQIQVKPSIGLDFAGALRS FT IVRQDPDVIMIGEMRDLETCRIAIQSSLTGHLVLSTLHTNSAAASITRLLDMGVESYLI FT ASTVNGILAQRLVRRLDPATREAFDAPPELIAEHGLERFTDERPIRLYRPRADAPGGGY FT RGRSAITELLVMNEELRSLLMRHADASTLEEAARRGGLRTLHEEGLRQAVAGVTSLEEV FT LRVTRGDGT" FT gene complement(3748853..3750610) FT /gene="gspE" FT /locus_tag="PSPTO_3317" FT /old_locus_tag="PSPTO3317" FT CDS 3751384..3754125 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3318" FT /old_locus_tag="PSPTO3318" FT /product="beta-glucosidase" FT /note="similar to GP:2952030, and SP:P27034; identified by FT sequence similarity; putative" FT /db_xref="GOA:Q87ZV4" FT /db_xref="InterPro:IPR001764" FT /db_xref="InterPro:IPR002772" FT /db_xref="InterPro:IPR011658" FT /db_xref="InterPro:IPR013145" FT /db_xref="UniProtKB/TrEMBL:Q87ZV4" FT /protein_id="AAO56796.1" FT /translation="MNKRKMIGAHSALALLALAVSQVHAADPTVQQGREDRAEKAAQKT FT LAKMTMEEKLAYIGGTGGWDVKPLTNYGVPQIHGADGGVGVRYTSEGNDQGVVYPSGPN FT LAATFNPRRAIDLGRALGYDTATGGYQFITGPGVNLYRMPYGGRAFEYLSGEDPFLGAS FT LAPGVINGIQSRGVWANAKHYAANDQESNRFNLDQKMPERVLREMSLPAFESSSKNGNV FT AMMMCAFQKVNGDFACESEHLIAQILKKEWGYKGFVQSDYNAVVHGFEAARAGTDLDMM FT GYQMNSSVLKPHLDAGDLSAATIDDKVRRILKQIYLYKFDSKAPLTTHNMNSSTSNKVA FT LNAAREGIVLLKNQGDLLPLDKQKVKKIAVVGTLAKYAPPTGFGSANVMASHYVSELSG FT LQQMAPNAKVEFIDGLSLDPSTSAWNTTDAAGNSVQGMKVEYFSNTNWSGDAAVTRTEQ FT HVDLDWANDKNLPFESNTSTSDPYTTKGSTAGELNGDTSSTSIRYTGKITPTQSGEQVF FT KVRADGAVRLWVNGKKIIDNGDGKPLPGNSIPPTIPEFAKINLEAGQSYDVKLEYSRRA FT GYLSTMGGLVGVQLSSASLNAPQDLSGYDAVVVAVGNSNEYEGEGFDHSFDLPEFQNEL FT IQNIAKVNPNTVVTMYGGTGLKMSDWIEQVPVALHAFYPGQNGGQALAEILFGKINPSG FT KLPISIERNIEDNPAYASFPKFDNQNTLAEMDYKDDLMLGYRGYEKKGIKPLYPFGYGL FT SYTTFGYSNIKVTPGVAVGNTPIKVSFDLTNTGKVGGSEVAQLYVGQQNPKVERPIKEL FT KGYKKVFLKPGESKRVTIELNDRSLAYFDVKTNQWVVDADTFNLSLGGSSQDIRLNAKL FT VNSFRQELSTTTSNPLPRSALNSVLVEKPPVKTGGVFQQTVE" FT gene 3751384..3754125 FT /locus_tag="PSPTO_3318" FT /old_locus_tag="PSPTO3318" FT CDS complement(3754165..3754809) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3319" FT /old_locus_tag="PSPTO3319" FT /product="transcriptional regulator, TetR family" FT /note="similar to GP:6714735; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87ZV3" FT /db_xref="InterPro:IPR001647" FT /db_xref="InterPro:IPR009057" FT /db_xref="InterPro:IPR012287" FT /db_xref="UniProtKB/TrEMBL:Q87ZV3" FT /protein_id="AAO56797.1" FT /translation="MTRYEPTETGTPVTRQRRAPKGEKRREELLDAALQVFSLEGYTGA FT SVAKVAAIVGISVAGLLHHFPSKISLLMGVLERRDEVNGRIAAQVRTDNTLTGLLGGLR FT AINRSNATAPGVVRAFSILNAESLVDSQPAYEWFQTRYERIHAHLLGQFSGLVERGEVR FT ADVDLDKVVQQLLAMMDGLQIQWLRFPDQVDLIECFDAYIAQVDATVRARP" FT gene complement(3754165..3754809) FT /locus_tag="PSPTO_3319" FT /old_locus_tag="PSPTO3319" FT CDS complement(3754868..3755323) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3320" FT /old_locus_tag="PSPTO3320" FT /product="membrane protein, putative" FT /db_xref="UniProtKB/TrEMBL:Q87ZV2" FT /protein_id="AAO56798.1" FT /translation="MALWGIGQTCARLVQALLARSVCALRLNVWVAMGLVLCFALAFLA FT NGQPLLACLFVFGYGAMNGLATLLRASLPFALFGPRHYARLQGRLLAPGFLLSAAAPWF FT FAWVRERYADRGLLGLSLSLSVVLVIVALLLQRYCEKSRNCPTIKVQ" FT gene complement(3754868..3755323) FT /locus_tag="PSPTO_3320" FT /old_locus_tag="PSPTO3320" FT misc_feature 3759234..3759366 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.4e-60" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=198.800000 FT CDS 3759367..3760389 FT /gene="PSPTO3325" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO56803.1" FT /db_xref="GI:28853737" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL 3759367..3760389 FT /gene="PSPTO3325" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO56803.1" FT /db_xref="GI:28853737" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature 3760390..3760589 FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="1.8e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.700000 FT CDS complement(3760741..3762108) FT /codon_start=1 FT /locus_tag="PSPTO3326" FT /orf_name="PSPTO_3326" FT /product="Group II intron, maturase " FT /function="RNA binding" FT /function="RNA-directed DNA polymerase activity " FT /biological_process="RNA-dependent DNA replication " FT /protein_id="AAO56804.1" FT /db_xref="GO:0003723" FT /db_xref="GO:0003964" FT /db_xref="GO:0006278" FT /db_xref="HOGENOM:HBG244542" FT /db_xref="InterPro:IPR000123" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR013597" FT /db_xref="TIGR:PSPTO2165" FT /db_xref="TIGR:PSPTO3326" FT /db_xref="UniParc:UPI0000008AAC" FT /db_xref="UniProtKB/TrEMBL:Q877J2" FT /transl_table=11 FT /translation="MTIQQAMHQMPGKPGRDAIAEGETPRKASSDEAGCPRNDSTPTGS FT GLLQAALTRDNLQLAFKQVRANKGAAGVDGLGIVETAEHLKTAWPGIRAQLLAGTYRPD FT PVRRVLIPKPGGGERKLGIPTVTDRLIQQALLQVLQPLLDPDFSNHSYGFRPERSAHQA FT VLAAQQYIHSGRQIVVDVDLEQFFDCVEHDVLIARLGRKVKDRDVLRLIRAYLNSGALI FT EGMVMTSTRGTPQGGPLSPLLANVVLDEVDKELERRGHCFVRYADDANVYVRSPKAGQR FT VMALLRRLYGRLGLRVNESKSAVASAFGRKFLGFSFWQSPKGEVKRRVALKALQVFKHR FT IRGLTPRSGGRSLPQVVENLRPYLLGWKAYFGLSQAPGLWKSLDGWIRRRLRAIQLKQW FT KTGKTTYRELRKLGANSDLAAAIASDSHRTWHNSAGLIHGVLTVAWFDRLGLPRLY" FT /colour=178 58 238 FT gene complement(3760741..3762108) FT /locus_tag="PSPTO_3326" FT /old_locus_tag="PSPTO3326" FT /colour=178 58 238 FT tRNA 3771634..3771721 FT /gene="tRNA-Ser-3" FT /product="tRNA-Ser" FT /note="codon recognized: UCA" FT VR_#77 3822500..3877500 FT /colour=255 255 0 FT misc_feature 3824683..3865352 FT /note="PHAGE03; putative prophage; putative P2-like FT integrated prophage; attL/R=a[gt]tggaaatcttcaaa. Targeted FT end5 of ORF08953 - 6-pyruvoyl tetrahydrobiopterin syntase" FT /colour=178 58 238 FT CDS 3824867..3826042 FT /gene="PSPTO3385" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56863.1" FT /db_xref="GI:28853797" FT /translation="MALTDTALRQAKPKDKAYTLPDSLGLSLYVAPTAIKSWHFRFTW FT LGKQVRISLGTYPEIGLKEARIRRDEAREEVARGIDPRESRKEKKALLINAQGHTLRR FT VYEEWLAFRRGSLKPGSLRIISNSMELDWLPSFGNRQMNSITRSEIVSVIRRIEKRGS FT VTTAVKTRQRLSQIFRYAIATGIVDTNPTLEMHTVTERITLQRHFPFLPFSELPKTIS FT TILGCSAGQQYKSAFMMMIYCASRPGEVRHAMWKEIDFDNAIWTIPAGKMKMRRDHVV FT PLPNQAIELLKTMLPLTGHLEYIFVHRSDPTKPVSTNYANNVIELSGLTGIQSPHGFR FT HLFSTEMNGRGYNRDWIERQLAHSDTSIIRDTYNHATYIEQRREMMQDWADLVTVVV" FT /colour=178 58 238 FT MBL 3824867..3826042 FT /gene="PSPTO3385" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO56863.1" FT /db_xref="GI:28853797" FT /translation="MALTDTALRQAKPKDKAYTLPDSLGLSLYVAPTAIKSWHFRFTW FT LGKQVRISLGTYPEIGLKEARIRRDEAREEVARGIDPRESRKEKKALLINAQGHTLRR FT VYEEWLAFRRGSLKPGSLRIISNSMELDWLPSFGNRQMNSITRSEIVSVIRRIEKRGS FT VTTAVKTRQRLSQIFRYAIATGIVDTNPTLEMHTVTERITLQRHFPFLPFSELPKTIS FT TILGCSAGQQYKSAFMMMIYCASRPGEVRHAMWKEIDFDNAIWTIPAGKMKMRRDHVV FT PLPNQAIELLKTMLPLTGHLEYIFVHRSDPTKPVSTNYANNVIELSGLTGIQSPHGFR FT HLFSTEMNGRGYNRDWIERQLAHSDTSIIRDTYNHATYIEQRREMMQDWADLVTVVV" FT CDS complement(3866884..3867693) FT /gene="PSPTO3432" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56909.1" FT /db_xref="GI:28853843" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(3866884..3867693) FT /gene="PSPTO3432" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO56909.1" FT /db_xref="GI:28853843" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(3867690..3868712) FT /gene="PSPTO3433" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56910.1" FT /db_xref="GI:28853844" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(3867690..3868712) FT /gene="PSPTO3433" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO56910.1" FT /db_xref="GI:28853844" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT rRNA complement(3869438..3869557) FT /gene="Ps5SD" FT /product="5S ribosomal RNA" FT rRNA complement(3869705..3872607) FT /gene="Ps23SD" FT /product="23S ribosomal RNA" FT tRNA complement(3872851..3872926) FT /gene="tRNA-Ala-6" FT /product="tRNA-Ala" FT /note="codon recognized: GCA" FT tRNA complement(3872971..3873047) FT /gene="tRNA-Ile-4" FT /product="tRNA-Ile" FT /note="codon recognized: AUC" FT rRNA complement(3873151..3874668) FT /gene="Ps16SD" FT /product="16S ribosomal RNA" FT CDS 3881486..3883000 FT /gene="PSPTO3440" FT /note="identified by match to PFAM protein family HMM FT PF03023" FT /codon_start=1 FT /transl_table=11 FT /product="polysaccharide biosynthesis protein, putative" FT /protein_id="NP_793220.1" FT /db_xref="GI:28870601" FT /translation="MQNRHSVIRNTVLNYSGQAYVLLIGILIMPFYLGHLGAEAYGLI FT GFFTLLQAWLQLLDAGLSPSLVRAVAQQQSLPAGEQSLGRLLRSFELIFLPLAVLSGV FT LIVAASAWIATHWLNANTLQPETLTHCIALMGVIIALRLYSTLYKSGIQGLEQHAWLN FT AANVSIATLRYFGGLVLVSQFSRDPRDFFEFQVAVGLIETLLFAGKAHRQMPAPHWMS FT GLDWPLLKPILPFAASLSLSAVLWIVLTQLDKVLLSRLLPLDQYGYFSLVALIAAGIM FT MLTNPLVQTLLPRLTVLMAEGHRDEMHALFLAANRLVCTCLFPLAALIALQAEPLIFA FT WTGDQAAASWSGPVLGWYALGSAIMAASAFQFYLQYTYGRMHLHLWYSVISTLISVPV FT MCLAIHWQGVHGAALAWFFLRATSFAIWPAIVHQRLVPGIHRAWLSDMLRISAMTALG FT LAISTPVFDLIAGQSRSSLFMALAASGLITLTLVAASHKPLASKIYVLFSRTST" FT /colour=0 255 0 FT CW_VIR_gene 3881486..3883000 FT /gene="PSPTO3440" FT /colour=0 255 0 FT CDS 3892045..3893454 FT /gene="PSPTO3449" FT /note="similar to SP:Q48460; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="capsular polysaccharide biosynthesis protein" FT /protein_id="NP_793229.1" FT /db_xref="GI:28870610" FT /translation="MRTSVRGILHAHQSALSLAHRLLDLTVIVLIGHWQSGLTAIDST FT EAWFHIILAVLVFHWVSEYHQLYGSWRGERILRELTKVFSYWAMTFVTLQSLNYLLIN FT RMQLPDNGQLRWFVLVLAVLCGYRLLIRLTLHKLRRHGFNTRRVAIVGTGQVGERLAR FT SISLAPWMGLNLLGFYDSHPQQMNLQGEKRRLPVLGDLDQLIEDAREGRIDKVYITLA FT FSADAQLSELITGLSDTTASVYLIPDVFMFDLLHARSESINGLASISIFDSPMDGAWS FT LAKRAEDILLSSLILLLIAVPLLLIATAIKLTSPGPVLFRQRRYGLDGRSIMVWKFRS FT MIVQDTAEGVRQATRNDIRVTPLGAFLRRTSLDELPQFFNVLHGEMSIVGPRPHAVAH FT NEQYRKQVSGYMLRHKVKPGITGWAQINGWRGETDTLDKMRMRVEFDLEYIEHWSIWL FT DLKIILLTLLKGFVNKNAF" FT /colour=0 255 0 FT CW_VIR_gene 3892045..3893454 FT /gene="PSPTO3449" FT /colour=0 255 0 FT CDS 3893560..3894654 FT /gene="PSPTO3450" FT /note="similar to GP:4512005, and SP:Q46629; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="capsular polysaccharide biosynthesis protein" FT /protein_id="NP_793230.1" FT /db_xref="GI:28870611" FT /translation="MKLTLAALLLTALTLQGCAFAPGQHMTPDDVTSSDSDEPKAQLV FT EVTPKSLQQQQQRATAEARALPQELLDYKTPEYVIGAGDTLLVTVFEHPELTAPGSQD FT QLDANTREVLNDGTLYFPYVGRIRAGGRTVGEVREQLRMGLSPQYTEVKVDVKVLRYN FT SQRILLSGSFKVPGPQPVTNIPLSLVQAVSVAGVDLTDANLAGLTLRRDGRDYLIDID FT ALNRKDSKLSRIFLKDGDYLHLNSNSRNKIYVLGEVRNPQVISFGTTRLTLLEALGNS FT GGLSPDSADGNAVYVIRGAENFAAATSTSTVYHLNAKKPTAYLLAGQFELKAQDVVFV FT GPADITRWSRFISQLLGSASVVQTGAAFRN" FT /colour=0 255 0 FT CW_VIR_gene 3893560..3894654 FT /gene="PSPTO3450" FT /colour=0 255 0 FT VR_#78 3927500..3945000 FT /colour=255 255 0 FT CDS 3929574..3931601 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3482" FT /old_locus_tag="PSPTO3482" FT /product="Rhs element Vgr protein" FT /note="identified by match to TIGR protein family HMM FT TIGR01646" FT /db_xref="InterPro:IPR006533" FT /db_xref="UniProtKB/TrEMBL:Q87ZE7" FT /protein_id="AAO56957.1" FT /translation="MFAPGNSAHFVLLIPSVRNDFKVLAFDGVEAISTLYAIKIELVSE FT NSDFDLESLLSRQAFLQFGLNGEGIHGLIEDVFVGDAGKRLTRYHLTLVPALHYLQFSH FT NQRIFQNLTVPEIVAQVLNGHGRQSDTFNFKVSISPVREYCTQYGESDYEFIQRLCAED FT GIAWHHQHTQEGHQLVFTDDQTFFPTLGDTPYKQGSGLAADKPVVYQFSMRFNTRTSTT FT TRRGYDLKRPSMLLESAFTAEFTPKLEDYRYPELIENEKLGKQLARQGLERHRVDYQLA FT EGSSDQPALRSGHFFNLVEHPRKRCNDLWLLVGVKHEGKQPQALEESVRSNTSPADGFT FT QGYRNTFSAIPWDVFYRPPMPERRSILVSQTARVTGPANEEIFCDEYGRVKVEFHWDRA FT ELNSDNSSCWLRVASSWAGEGFGSVTIPRIGMEVVVTYLEGDPDKPLITGCVTNKVNAP FT AYPLPANKTKTVLRTHSSPHNGGFNELAIEDRAGQEKISFRAQRDFDELILNDSVSHIG FT NDQSTQVDRNSSSLIKGDETHTTNGVRNTVIGGNELISVSGDTSVTSGGNLIIQVGSQA FT HVTAVNVVINAGMSLTLQAGGNHIVISSGGIFSSVPIVQGGSPMAGVSPLQALQAPSTE FT VPAIIASPRSIVAAARQQAADFCPLCEACLNGQCKIGEIA" FT /colour=178 58 238 FT gene 3929574..3931601 FT /locus_tag="PSPTO_3482" FT /old_locus_tag="PSPTO3482" FT /colour=178 58 238 FT promoter complement(3939658..3939690) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT misc_feature complement(3940888..3941023) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="5.7e-12" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=37.300000 FT misc_feature complement(3941257..3941392) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="3.2e-09" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=28.200000 FT misc_feature complement(3941526..3941661) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="4.5e-11" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=34.400000 FT misc_feature complement(3941895..3942030) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="4.5e-11" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=34.400000 FT misc_feature complement(3970315..3970452) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="8.4e-12" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=36.800000 FT CDS complement(3981164..3982141) FT /gene="PSPTO3528" FT /note="similar to GP:8885851, and GP:1196750; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="IS52, transposase" FT /protein_id="AAO57003.1" FT /db_xref="GI:28853937" FT /translation="MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWAQLEAQVAPFYS FT NTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPD FT ATTLLRFRRLLETHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGK FT RDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYV FT SGDAGYTGAAKRPEHAERDVIWSIAARPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKV FT EHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQAAG" FT /colour=178 58 238 FT MBL complement(3981164..3982141) FT /gene="PSPTO3528" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:8885851, and GP:1196750; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="IS52, transposase" FT /protein_id="AAO57003.1" FT /db_xref="GI:28853937" FT /translation="MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWAQLEAQVAPFYS FT NTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPD FT ATTLLRFRRLLETHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGK FT RDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYV FT SGDAGYTGAAKRPEHAERDVIWSIAARPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKV FT EHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQAAG" FT CDS 3982432..3983868 FT /gene="PSPTO3529" FT /note="identified by match to PFAM protein family HMM FT PF02719" FT /codon_start=1 FT /transl_table=11 FT /product="capsular polysaccharide biosynthesis protein" FT /protein_id="NP_793309.1" FT /db_xref="GI:28870690" FT /translation="MRLQPVDSLSLTRTSLVEYFLFGIRLAHGVACILPGLAILLLIK FT DSSLHTPQSYLTMLLFFGCVGVLVFQAMGVYSEVLFSNDLRMGAMALAWTAAFGLLLF FT MQQAMGLFGYLSNEELLIWYLTSLALFGVIRLLLLMLFKHQMRKGVFLQNAVILGATE FT NGLRLAEYLLEHQDIRSGVIGFIDDRIGRMPKTVANLPLLGNTSDLERLIREEKVTQV FT LVALPWTAENRMDYIIRELRRLPVNVLLVPDMIAFRHTHNRITEVARLPMFNASDLPL FT NGWSPFIKRAEDIVLSSLALLLLSPVMLLVALAIKLDSSGPVLFRQKRYGYNNRLIEV FT FKFRSMHQHQADATAEQQTTRGDSRITRVGRFIRKTSLDELPQLFNVAAGSMSMVGPR FT PHATATKAAGILFEQAVKEYTSRHRVKPGITGLAQINGYRGETDTVEKIEKRVEFDLE FT YIENWSVWFDLYILMRTVPAVLFTREAY" FT /colour=0 255 0 FT CW_VIR_gene 3982432..3983868 FT /gene="PSPTO3529" FT /colour=0 255 0 FT CDS 3986265..3988256 FT /gene="PSPTO3532" FT /codon_start=1 FT /transl_table=11 FT /product="exopolysaccharide biosythesis protein" FT /protein_id="NP_793312.1" FT /db_xref="GI:28870693" FT /translation="MINIRSFRDLLRLFFIFKREVKITVVATFVIILLGAFLLPNRYE FT STALLLVKPGRDSSTVPIELSDRQAIVIPSGLRDPLLDEERMLTGRPIMRAVSEKYLA FT ELSMVPPETGVLASIKKGIKAVVGAVIDGVRSVLQFIGLVENRSQSDRLAEDLEKNFK FT VSHEPGSSVMELRFTWNDPATAQTVLRTWIEEYQLQRTKTLGRVSLYAFYESEVKSTG FT ENIIEYKKQIQNYLNQLSAVSISQRLADTSQGLNDLRTERNNTTRSIASTKAGLDLLK FT KQLAEQPKTVSAGRELALNPNRQDLQTRINGKEVERQEMLRSFKEQAPPIRAINEEID FT NLKKLLNVQDATVQRSESITPNPIYNRMQNVYADQQTSYARLQTQFAQQNAQIAQLET FT DRQQALNLEPELSRLQNELDAAEKSYALYKDSLEKSRIDRELDNSQISNIATIEEATF FT NPSRVFPKSLLMLLLALPLSFVVGALALYFFYLLDQRIHDGDKIERSFGVPVWTSLPD FT LERAQERSAAFSSNLHRVYGILPLDQVEERGLTIGFTSVKSGAGVSFVIERLSTLLTE FT QGHRVRSQGPGPASPGEIVLINASALSANQDAFVLLRKAELIVLVVRAEDTTVPMLED FT TLHNLNTAFKKVDGIIINRRRFEVPEQVLRFLKRIGSRG" FT /colour=0 255 0 FT CW_VIR_gene 3986265..3988256 FT /gene="PSPTO3532" FT /colour=0 255 0 FT VR_#79 4064916..4082498 FT /colour=255 255 0 FT VR_#79 4065000..4082500 FT /colour=255 255 0 FT CDS complement(4066177..4066986) FT /gene="PSPTO3607" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO57081.1" FT /db_xref="GI:28854016" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(4066177..4066986) FT /gene="PSPTO3607" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO57081.1" FT /db_xref="GI:28854016" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(4066983..4068005) FT /gene="PSPTO3608" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:14594862, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO57082.1" FT /db_xref="GI:28854017" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(4066983..4068005) FT /gene="PSPTO3608" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:14594862, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO57082.1" FT /db_xref="GI:28854017" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 4068085..4069107 FT /gene="PSPTO3609" FT /note="Warning: Expression or function of this gene might FT be disrupted. The first 2 resdues of the coding sequence FT are contributed by the end-sequence of an insertion FT sequence, ISPsy4.; identified by match to PFAM protein FT family HMM PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57083.1" FT /db_xref="GI:28854018" FT /translation="MTLRGEIGSRRSWESTGRALYDYFSFLQAHSLHWKDVDRGEKKD FT LVTGYRDYCRDTCSLATSTIRQRVRYVCEFYDFSLKNKWTEKLPYNEVSREVKSRSFN FT SSRHPIASKTVLVKDVLPVLTKSLPRFLRMSEVKELLTHAQNPHHRMMIRFALHTGMR FT QDEIASFPTAYVFNPEKGKNTSRNIQIRLDPRDGTGMRTKRSKMRDIFISRRFMLELH FT AYLTKMRGERSTLANSNAKELFLNHRGEPYADFGKSICRTIRNIGKKVSIVVSTHMLR FT HTYATQTLLSLQKNSEIEPLVFLQRQLGHSSIQTTMVYLHLVNALADEAVLAYDDELA FT NLSEVA" FT /colour=178 58 238 FT MBL 4068085..4069107 FT /gene="PSPTO3609" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="Warning: Expression or function of this gene might FT be disrupted. The first 2 resdues of the coding sequence FT are contributed by the end-sequence of an insertion FT sequence, ISPsy4.; identified by match to PFAM protein FT family HMM PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57083.1" FT /db_xref="GI:28854018" FT /translation="MTLRGEIGSRRSWESTGRALYDYFSFLQAHSLHWKDVDRGEKKD FT LVTGYRDYCRDTCSLATSTIRQRVRYVCEFYDFSLKNKWTEKLPYNEVSREVKSRSFN FT SSRHPIASKTVLVKDVLPVLTKSLPRFLRMSEVKELLTHAQNPHHRMMIRFALHTGMR FT QDEIASFPTAYVFNPEKGKNTSRNIQIRLDPRDGTGMRTKRSKMRDIFISRRFMLELH FT AYLTKMRGERSTLANSNAKELFLNHRGEPYADFGKSICRTIRNIGKKVSIVVSTHMLR FT HTYATQTLLSLQKNSEIEPLVFLQRQLGHSSIQTTMVYLHLVNALADEAVLAYDDELA FT NLSEVA" FT CDS 4071237..4071596 FT /gene="PSPTO3612" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57085.1" FT /db_xref="GI:28854020" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 4071237..4071596 FT /gene="PSPTO3612" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57085.1" FT /db_xref="GI:28854020" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 4071614..4073167 FT /gene="PSPTO3613" FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57086.1" FT /db_xref="GI:28854021" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 4071614..4073167 FT /gene="PSPTO3613" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57086.1" FT /db_xref="GI:28854021" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS 4074346..4075947 FT /gene="PSPTO3615" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57087.1" FT /db_xref="GI:28854022" FT /translation="MPGQKRPSASTVRNLFENFLPFVHYLKSIQITSMASVVTLACTS FT YIQTCYSIIQTNRYKGKPLSASSLTRRFAAVEAIYELSQYTADPMPRHPWPNGAAASI FT ARASSALANSTSGKTPIIPDDVFCALFSAAHQNITKGSWLLDLRDELDSVALSLQHQV FT FRMTQSAQNRRLTERGWIGGLVAFNLALLDLRTSCYIVLASVSGCRNHELANLKTGSR FT HSTEGDDGTVYHWLRTETQKTKSGIHDWMVPEIAITTHELLERWAVPYQQRIEAEINL FT RTIQNPADPLTAEAMLHRDSLFLATMSDNIRVIRTLTGSTWNENLKRFSRRAGLSWDL FT ATHQFRRKFANYAAHSRFGDLRYLRQHFTHWSMNMTLGYAMDQDWGQHFDLDLFDEIE FT SELGDIKTDTVSQWLESDSLSGGYGKSLGRWKRDPNNLTLFKDHSSMVKAIAESTAIR FT SNGHAWCTADDDRCVGNSTERTRCGGCTSSVVGAQHASVYSSAADQLIDLLQYDDIGE FT GGRRRVLRDLERCKTVLLELGYIQE" FT /colour=178 58 238 FT MBL 4074346..4075947 FT /gene="PSPTO3615" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57087.1" FT /db_xref="GI:28854022" FT /translation="MPGQKRPSASTVRNLFENFLPFVHYLKSIQITSMASVVTLACTS FT YIQTCYSIIQTNRYKGKPLSASSLTRRFAAVEAIYELSQYTADPMPRHPWPNGAAASI FT ARASSALANSTSGKTPIIPDDVFCALFSAAHQNITKGSWLLDLRDELDSVALSLQHQV FT FRMTQSAQNRRLTERGWIGGLVAFNLALLDLRTSCYIVLASVSGCRNHELANLKTGSR FT HSTEGDDGTVYHWLRTETQKTKSGIHDWMVPEIAITTHELLERWAVPYQQRIEAEINL FT RTIQNPADPLTAEAMLHRDSLFLATMSDNIRVIRTLTGSTWNENLKRFSRRAGLSWDL FT ATHQFRRKFANYAAHSRFGDLRYLRQHFTHWSMNMTLGYAMDQDWGQHFDLDLFDEIE FT SELGDIKTDTVSQWLESDSLSGGYGKSLGRWKRDPNNLTLFKDHSSMVKAIAESTAIR FT SNGHAWCTADDDRCVGNSTERTRCGGCTSSVVGAQHASVYSSAADQLIDLLQYDDIGE FT GGRRRVLRDLERCKTVLLELGYIQE" FT CDS complement(4094721..4095359) FT /gene="ccmA" FT /codon_start=1 FT /transl_table=11 FT /product="heme exporter protein CcmA" FT /protein_id="NP_793411.1" FT /db_xref="GI:28870792" FT /translation="MTPAPPFLQATALACERDWRVLFENLDLHLCAGDMLQVSGPNGS FT GKTSLLRLLCGLMQPTAGQVLLNGQVLGRQRAPGCDLLWLGHAPALKDLLTPLENLAW FT LCALHQPAGADAIGHALNAVGLAGFEDVPCHTLSAGQQRRVALARLHLPGPSLWILDE FT PFTALDQQGIAQLENHLADHCEQGGMVVITTHHTLSRLPAGYRSIDLAKGSA" FT /colour=0 0 255 FT diffusible complement(4094721..4095359) FT /gene="ccmA" FT /colour=0 0 255 FT /note="locus_tag: PSPTO3635" FT VR_#80 4107500..4117500 FT /colour=255 255 0 FT CDS complement(4112598..4114151) FT /gene="PSPTO3651" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57121.1" FT /db_xref="GI:28854056" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(4112598..4114151) FT /gene="PSPTO3651" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57121.1" FT /db_xref="GI:28854056" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(4114169..4114528) FT /gene="PSPTO3652" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57122.1" FT /db_xref="GI:28854057" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(4114169..4114528) FT /gene="PSPTO3652" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57122.1" FT /db_xref="GI:28854057" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT VR_#82 4154902..4162290 FT /colour=255 255 0 FT CDS complement(4158118..4159659) FT /codon_start=1 FT /locus_tag="PSPTO3691" FT /orf_name="PSPTO_3691" FT /product="Ea59 protein" FT /biological_process="transport" FT /cellular_component="membrane" FT /protein_id="AAO57160.1" FT /db_xref="GO:0006810" FT /db_xref="GO:0016020" FT /db_xref="HOGENOM:HBG251015" FT /db_xref="InterPro:IPR003439" FT /db_xref="TIGR:PSPTO3691" FT /db_xref="UniParc:UPI0000009042" FT /db_xref="UniProtKB/TrEMBL:Q87YV1" FT /transl_table=11 FT /translation="MKLSMQMLKKSSLIPSDLTDTLLLVGSGWDDYSFKTSFTVMHFGP FT DAKKTELGTTKIGYKDQQHGWTSEKFSTKNISLSDDFFSLGQDVDFYRKLQGGLSADAA FT LAVLQALKDVIADPLRLEDVKNEQVFRESLMRNVSWSVIRDQFKRVLAGKPELTSFHFS FT YQTNGDEQRAGVDVSFKVTPHSLPSTNVHVLIGRNGVGKTTILNDMVETILSDTTGRPH FT CGKFLIYDSLGSEPMPTDYFSSVVSVSFSAFDPFLFPADQPDRSKGVAYFYVGMQSPGE FT GPGKRPPKTTEALTEDFITSLESCFSQESKRQRWVAAIKRLESDSNFEDMDLAHLNELP FT TDEAIVKAHRIFSRMSSGHSIVLLTLTKLVEAVEEKTLVLMDEPESHLHPPLLSAFTRA FT ISDLLQDRNGVAIIATHSPVVVQEAPGSCVWKLTRLRAEGRADRPERETFGENAGVLTR FT EIFGLEVNKSGYHEVLQEAVNRGGTFESILADYQEQLGFEAQAILRKMVASRRES" FT promoter 4199603..4199635 FT VR_#83 4200000..4219353 FT /colour=255 255 0 FT CDS 4214279..4215256 FT /gene="PSPTO3731" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO57200.1" FT /db_xref="GI:28854135" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 4214279..4215256 FT /gene="PSPTO3731" FT /colour=178 58 238 FT tRNA complement(4216266..4216350) FT /gene="tRNA-Leu-3" FT /product="tRNA-Leu" FT /note="codon recognized: CUA" FT tRNA complement(4216407..4216482) FT /gene="tRNA-His-1" FT /product="tRNA-His" FT /note="codon recognized: CAC" FT tRNA complement(4216534..4216610) FT /gene="tRNA-Arg-5" FT /product="tRNA-Arg" FT /note="codon recognized: AGA" FT CDS complement(4217893..4219353) FT /gene="PSPTO3734" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57203.1" FT /db_xref="GI:28854138" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLRLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(4217893..4219353) FT /gene="PSPTO3734" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57203.1" FT /db_xref="GI:28854138" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLRLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT misc_feature complement(4232599..4232798) FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="2.6e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.200000 FT CDS complement(4232799..4233821) FT /gene="PSPTO3746" FT /note="identified by match to PFAM protein family HMM FT PF01548" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO57215.1" FT /db_xref="GI:28854150" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL complement(4232799..4233821) FT /gene="PSPTO3746" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01548" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO57215.1" FT /db_xref="GI:28854150" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature complement(4233822..4233956) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.5e-61" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=202.100000 FT VR_#84 4240000..4252500 FT /colour=255 255 0 FT VR_#85 4272500..4280000 FT /colour=255 255 0 FT misc_feature complement(4302985..4303184) FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="1.8e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.700000 FT CDS complement(4303185..4304207) FT /gene="PSPTO3800" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO57269.1" FT /db_xref="GI:28854204" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL complement(4303185..4304207) FT /gene="PSPTO3800" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO57269.1" FT /db_xref="GI:28854204" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature complement(4304208..4304341) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="1.7e-61" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=201.800000 FT CDS complement(4314740..4316200) FT /gene="PSPTO3808" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57277.1" FT /db_xref="GI:28854212" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(4314740..4316200) FT /gene="PSPTO3808" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57277.1" FT /db_xref="GI:28854212" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT tRNA complement(4316299..4316375) FT /gene="tRNA-Asp-1" FT /product="tRNA-Asp" FT /note="codon recognized: GAC" FT tRNA complement(4316490..4316566) FT /gene="tRNA-Asp-2" FT /product="tRNA-Asp" FT /note="codon recognized: GAC" FT tRNA complement(4316635..4316710) FT /gene="tRNA-Val-3" FT /product="tRNA-Val" FT /note="codon recognized: GUA" FT CDS complement(4333852..4334208) FT /gene="pilZ" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilZ" FT /protein_id="NP_793598.1" FT /db_xref="GI:28870979" FT /translation="MSLPLSTGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTSKS FT YKLGDEVFMLLNLMDEPEKVPVAGRVTWITPKGAQGNRTAGVGVQFNDGDNTARNLIE FT THLVGALKSDRPTHTM" FT /colour=0 255 0 FT CW_VIR_gene complement(4333852..4334208) FT /gene="pilZ" FT /colour=0 255 0 FT /note="locus_tag: PSPTO3825" FT VR_#86 4347221..4352708 FT /colour=255 255 0 FT CDS 4357545..4359572 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_3849" FT /old_locus_tag="PSPTO3849" FT /product="Rhs element Vgr protein" FT /note="identified by match to TIGR protein family HMM FT TIGR01646" FT /db_xref="InterPro:IPR006533" FT /db_xref="UniProtKB/TrEMBL:Q87YF1" FT /protein_id="AAO57316.1" FT /translation="MPAPEHRFSLTIEDSPYAFQVLAFDGTEGISRPYAFTIDLVSECA FT DPDLEQLLHKQAFLAFDGMESGIHGQIYQVSQRDSGRRLTHYSVTLAPHFSYLAHRTNQ FT RIFQSLTVPQIISLVLKDHGIFESAHQFQLNTCYLPREYCVQYQETDLHFIQRLCEEEG FT MHFHFQHSRKSHVLVFGDNQSIFRKLARATAYHQDSGMAADEPVVRSFGTRLETRTSHT FT ARRDYNFENAGWQPQADYHPDKDKVQPDLEDYTYPGSFHTRDRGQLLSQHALERHRCDY FT QKAEGKSDQPALVSGHFLQLSDHPRKEWNTLWLLTRVHHQGKQPQVLEEALVGNILDRE FT NFTQGYRNSFVATPWNVFFRPALKHRKPRIFGSQTARVTGPESEQVHCDSHGRIKVQFH FT WDRESTFNARSSTWLRVASQWAGNMHGSVTIPRVGMEVLVTFIDGDPDQPVVSGCLPNS FT LNPAPYELPAHQTRSVFRSRSTPDGGGFNELYLEDRSEQELIYVRAQRDMEQKINHDSR FT IEVGNDRLETVKGNSISVVETEERRTVGADRKVRVKADDYLHVDNNSYWHAGQILVAEA FT GQQVHIKAGTNLILDAGASLTLKAGGQHIVIGAGGIFSSSPINPGGVPFIGARSVSGLP FT TPVAALLSASLASQKQAFQDAAAKAAPVCAICLKLKGEQP" FT /colour=178 58 238 FT gene 4357545..4359572 FT /locus_tag="PSPTO_3849" FT /old_locus_tag="PSPTO3849" FT /colour=178 58 238 FT VR_#87 4357545..4365511 FT /colour=255 255 0 FT tRNA complement(4408094..4408170) FT /gene="tRNA-Asp-3" FT /product="tRNA-Asp" FT /note="codon recognized: GAC" FT tRNA complement(4408191..4408266) FT /gene="tRNA-Val-4" FT /product="tRNA-Val" FT /note="codon recognized: GUA" FT misc_feature complement(4410569..4410701) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="2.4e-09" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=28.700000 FT VR_#89 4437500..4460000 FT /colour=255 255 0 FT misc_feature 4445530..4453456 FT /note="PHAGE04; putative prophage; defective prophage FT region; integrase nearby, but likely a Shufflon FT recombinase for pillin phase variation. Several FT hypotheticals near shufflon recombinase - pili?" FT /colour=178 58 238 FT CDS complement(4457531..4458574) FT /gene="PSPTO3949" FT /note="similar to GP:48994, GB:L07868, and PID:337360; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57410.1" FT /db_xref="GI:28854346" FT /translation="MGELWGNGGGCYSPVPPVMIPFMAYYEKRGDAWRAQIRRKGYPT FT LSATFDTKAEAQRWAAELEGDMSRARFVDVREAEATSLATALERYESEVTESKKGAKQ FT ERVRIKKWMESKFAGKSLASLRSSDMASYRDAEIKAGRSTATVRLDLAVISHLYTVAT FT KDWGIEGLTNPCRALRMPKGSKQRERRPTADELKSLYKAAGEISPELPVIIELAVETA FT MRRSELVTLRKDQIQGKVAFLEDTKNGERRSVPLSSRARELIEGVPAPIKGGPLFRLK FT ADTVSNYFPLACEKANIQGLRLHDLRHEATSRLFERGFTMMEVASITGHKTLAMLKRY FT THLSPQDLAEKLG" FT /colour=178 58 238 FT MBL complement(4457531..4458574) FT /gene="PSPTO3949" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:48994, GB:L07868, and PID:337360; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57410.1" FT /db_xref="GI:28854346" FT /translation="MGELWGNGGGCYSPVPPVMIPFMAYYEKRGDAWRAQIRRKGYPT FT LSATFDTKAEAQRWAAELEGDMSRARFVDVREAEATSLATALERYESEVTESKKGAKQ FT ERVRIKKWMESKFAGKSLASLRSSDMASYRDAEIKAGRSTATVRLDLAVISHLYTVAT FT KDWGIEGLTNPCRALRMPKGSKQRERRPTADELKSLYKAAGEISPELPVIIELAVETA FT MRRSELVTLRKDQIQGKVAFLEDTKNGERRSVPLSSRARELIEGVPAPIKGGPLFRLK FT ADTVSNYFPLACEKANIQGLRLHDLRHEATSRLFERGFTMMEVASITGHKTLAMLKRY FT THLSPQDLAEKLG" FT tRNA complement(4458619..4458708) FT /gene="tRNA-Ser-4" FT /product="tRNA-Ser" FT /note="codon recognized: UCG" FT VR_#90 4467500..4482500 FT /colour=255 255 0 FT CDS 4468247..4469845 FT /codon_start=1 FT /gene="pglA" FT /locus_tag="PSPTO3960" FT /orf_name="PSPTO_3960" FT /product="Polygalacturonase" FT /function="polygalacturonase activity" FT /biological_process="carbohydrate metabolism" FT /protein_id="AAO57421.1" FT /db_xref="GO:0004650" FT /db_xref="GO:0005975" FT /db_xref="HOGENOM:HBG235475" FT /db_xref="HSSP:1BHE" FT /db_xref="InterPro:IPR000743" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="TIGR:PSPTO3960" FT /db_xref="UniParc:UPI0000009141" FT /db_xref="UniProtKB/TrEMBL:Q87Y49" FT /transl_table=11 FT /translation="MSGAAHFSNSAFRKTSWAITSLTASLMIAAPVQAAGEAAVVTPWG FT TINEPASPQVCKQLSAALAPKDGSLDSVDSAALYSRPDQDRIQSAINGCAAGQAVQLIK FT GTGDNSAFLSGALQLKSGVTLWIDDGVTLFASRNPKDYDNGKGTCGVTTIANQDACSSL FT ISAKNTRASGVIGKGVIDGRGGSLLTSGANANQRSWWDLVYQKTLSNAYQQKPRLIQVS FT GGTDFVIQGVTLQNAPDFNIVTDGVTGVTVWGIKILTPSRVYTVEGYHCPTGSTPDQKT FT PGTCFTPETVKNTDGFDPGQSNKVLLAYSYISTGDDNVAIKSSRTSGSRDLMFAHNHFY FT YGHGLSIGSETNGGVHNVSVVDLAADGADSQDGIGLRIKSGAKNGGIVDGVSYENVCMR FT NVKFPLVFDTQYGSASGTSYPDFSGITVKGFHYLGSPRFGGGKMTFVGYNDNGQKRPIS FT ITLDNVVFDGTQPNLTGLTATHFILGPGPVSFANKLVPSIKDNVTVSGSPGEGTPVDCT FT AAFVPMKSVVPGAPF" FT /color=0 255 0 FT gene 4468247..4469845 FT /gene="pglA" FT /locus_tag="PSPTO_3960" FT /old_locus_tag="PSPTO3960" FT /color=0 255 0 FT CDS complement(4470781..4471758) FT /gene="PSPTO3963" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO57424.1" FT /db_xref="GI:28854360" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(4470781..4471758) FT /gene="PSPTO3963" FT /colour=178 58 238 FT CDS 4474543..4474902 FT /gene="PSPTO3966" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for an IS66 family transposase; similar to FT GP:5824138; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57426.1" FT /db_xref="GI:28854362" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNRHRNRVKILYWERNGFCLWLKRLESERFKTSPDETDEAIVLTVQELNWLLDGF FT DLWRNRPHKVLTPRFVA" FT /colour=178 58 238 FT MBL 4474543..4474902 FT /gene="PSPTO3966" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for an IS66 family transposase; similar to FT GP:5824138; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57426.1" FT /db_xref="GI:28854362" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNRHRNRVKILYWERNGFCLWLKRLESERFKTSPDETDEAIVLTVQELNWLLDGF FT DLWRNRPHKVLTPRFVA" FT tRNA complement(4476434..4476509) FT /gene="tRNA-Lys-2" FT /product="tRNA-Lys" FT /note="codon recognized: AAA" FT VR_#92 4487500..4495000 FT /colour=255 255 0 FT promoter 4489552..4489584 FT tRNA 4498448..4498524 FT /gene="tRNA-Met-3" FT /product="tRNA-Met" FT /note="codon recognized: AUG" FT tRNA 4498716..4498792 FT /gene="tRNA-Met-4" FT /product="tRNA-Met" FT /note="codon recognized: AUG" FT VR_#93 4505431..4532282 FT /colour=255 255 0 FT CDS 4507088..4508254 FT /codon_start=1 FT /locus_tag="PSPTO3995" FT /orf_name="PSPTO_3995" FT /product="Abortive infection protein, internal deletion " FT /protein_id="AAO57454.1" FT /db_xref="HOGENOM:HBG492858" FT /db_xref="TIGR:PSPTO3995" FT /db_xref="UniParc:UPI0000009161" FT /db_xref="UniProtKB/TrEMBL:Q87Y17" FT /transl_table=11 FT /translation="MIYSFGARNYFSFKDGFEVSLEFNSKVPKSISRSKKVSNILGIKG FT ANASGKTNILKCLKFLAWFTTESFKSEPSDAMHLSAFFGNTKPSDFYIDFTQNGVRYRY FT ELTTTRTLVIREAVYKKVTRKTPLLERKHNSITYRTSDLAGIDLITLRDNASIIDTVEH FT YKLKDIGDDLSNIHRFFSTFGGNVHGFGIVSDTTLYNYGSISKLYHEHPEALSFASKII FT QEADLGISGLGIHQSESADGKTRYFPVFLHNAQCGYGGENWLTYHEESDGTSALYRRLY FT QYWKVLKTGGVLVMDEFDTNFHPDLLPKFLDLFLSEDSNPNDAQFIFTSHNLEIMDYLG FT KYRTYLVSKECGESFCYRLDEIPGDIIRNDRSISALYRDGKLGGVPKI" FT /colour=178 58 238 FT CDS complement(4509044..4510597) FT /gene="PSPTO3996" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57455.1" FT /db_xref="GI:28854391" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(4509044..4510597) FT /gene="PSPTO3996" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57455.1" FT /db_xref="GI:28854391" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(4510615..4510974) FT /gene="PSPTO3997" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57456.1" FT /db_xref="GI:28854392" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(4510615..4510974) FT /gene="PSPTO3997" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57456.1" FT /db_xref="GI:28854392" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 4511447..4511806 FT /gene="PSPTO3998" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57457.1" FT /db_xref="GI:28854393" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 4511447..4511806 FT /gene="PSPTO3998" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57457.1" FT /db_xref="GI:28854393" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 4511824..4513377 FT /gene="PSPTO3999" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57458.1" FT /db_xref="GI:28854394" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 4511824..4513377 FT /gene="PSPTO3999" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57458.1" FT /db_xref="GI:28854394" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(4514766..4515260) FT /gene="avrPto1" FT /locus_tag="PSPTO4001" FT /note="similar to GP:309853; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector protein AvrPto1" FT /protein_id="AAO57459.1" FT /db_xref="GI:28854395" FT /translation="MGNICVGGSRMAHQVNSPDRVSNNSGDEDNVTSSQLLSVRHQLA FT ESAGVPRDQHEFVSNQAPQSLRNRYNNLYSHTQRTLDMADMQHRYMTGASGINPGMLP FT HENVDDMRSAITDWSDMREALQYAMGIHADIPPSPERFVATMNPNGSIRMSTLSPSPY FT RNWQ" FT /colour=255 0 0 FT CDS complement(4514766..4515260) FT /gene="avrPto1" FT /locus_tag="PSPTO4001" FT /note="similar to GP:309853; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector protein AvrPto1" FT /protein_id="AAO57459.1" FT /db_xref="GI:28854395" FT /translation="MGNICVGGSRMAHQVNSPDRVSNNSGDEDNVTSSQLLSVRHQLA FT ESAGVPRDQHEFVSNQAPQSLRNRYNNLYSHTQRTLDMADMQHRYMTGASGINPGMLP FT HENVDDMRSAITDWSDMREALQYAMGIHADIPPSPERFVATMNPNGSIRMSTLSPSPY FT RNWQ" FT /colour=255 0 0 FT gene complement(4514766..4515260) FT /gene="avrPto1" FT /locus_tag="PSPTO4001" FT /colour=255 0 0 FT promoter complement(4515296..4515328) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT misc_feature 4515380..4530373 FT /note="PHAGE05; putative prophage; defective prophage FT region. AvrPto nearby, but also many Tn genes." FT /colour=178 58 238 FT CDS complement(4517561..4518493) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_4004" FT /old_locus_tag="PSPTO4004" FT /product="conserved hypothetical protein" FT /note="similar to GP:17865429, and GP:17865429; identified FT by sequence similarity; putative; BLASTS TO A HAEMOPHILUS FT PHAGE" FT /db_xref="UniProtKB/TrEMBL:Q87Y14" FT /protein_id="AAO57461.1" FT /translation="MANEWAPIKLQWPVQATQWMDQMAGARDLIQSEMAITGQRVSMLA FT DIAKTSPGLIAGAAKSAISAGRDALVAQFENVPSCIVVTPFQHGVGQGSGGHQRFLSAP FT NLLQLLADKLTDTTDAVRPQGQQSALVLIFLATRLDQLAATLGRFNVVLPMPDLVRAER FT RAEHLAKLEVEKWVMPIAGQMPLWSQLPLQRCPITKLASQSMAGQLAVLEGYAADSSPM FT ADLADLQARKKAQVQEREQQLADLKAQFINSADDVSIQSRMLGPGDVGQLRRELLEGEA FT PGHEWPLCAGALLVGSAESLSFVQELVGL" FT /colour=178 58 238 FT gene complement(4517561..4518493) FT /locus_tag="PSPTO_4004" FT /old_locus_tag="PSPTO4004" FT /colour=178 58 238 FT CDS complement(4518980..4521406) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_4006" FT /old_locus_tag="PSPTO4006" FT /product="tail fiber protein H, putative" FT /note="similar to GP:13752220; identified by sequence FT similarity; putative" FT /db_xref="UniProtKB/TrEMBL:Q87Y12" FT /protein_id="AAO57463.1" FT /translation="MAASITIAGEKLIAQKQAANLPLTVARFVLANVPGLNVSGPVNRA FT GVKPPAAQIVYTASITQQGFVNPNQVVYSLLMGTDIGDFDWNWIGMETSDDVLLSVAYV FT PLQQKRKNVLPDQIGNNVTRNFLVVFDGAQQLTGIKIDASTWQFDYTARMKGIDERERI FT SNRDMFGRACFFGAGLQLQKVGAAYQLNPGVAYVDGVRLQLDAVLPVTVPAVPTKAWLD FT VVLQRELSDVVASFKVVFGQDVKVDYTDSASARHYLVPLADITGTSSLVDLRPVEAIDS FT ELVKYFAARVGDYPALRARATTKGDVGLGNLPNAISDDPNSNSGGVLATTRMVNAVRTV FT INQAIASIVDGSTAVGRAARLATARAIRFNGAASGIGTYDGAGDTDITLTLADSGVAAG FT TYTRVAVNVKGLVTSGGNPTTLAGYGITDAYSKDDANSSFVKQGGAPGMLGNRINIGWT FT GDRVKVSVDGTDGGRIWTDTTFNPNDKANKATSLSGYGITNAYTVEQVNDLVNRRVQAD FT SIIHAGFASNNTDYPYFRRSSDEKVYYLQPQIGYTPLQQGGGAGQKTNKVFIGWSDVGL FT KLTVDTIDIGRIWTEQSFNPNDKANRSNSIAGYGITDCYTVNQVNSLLGDKANRSNSIA FT GYGITDCYTVTQVNSIVNQRVAGDAIQTAGFASDNPEFPYFRRSSTGGIHYLQNRLGFT FT PVQQGGGANQAGNQLRLGWATNAAGIRAQVDATDLGLLWGEQNFYRPDNNNFLAVSITA FT TEVRLPAGGTWCYSLMHYYSGGAGVVGRSGQAAGGTVISFSGGSTIYGFAWRYAA" FT /colour=178 58 238 FT gene complement(4518980..4521406) FT /locus_tag="PSPTO_4006" FT /old_locus_tag="PSPTO4006" FT /colour=178 58 238 FT CDS complement(4521415..4521939) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_4007" FT /old_locus_tag="PSPTO4007" FT /product="conserved hypothetical protein" FT /note="similar to GP:13752219, and GP:13752219; identified FT by sequence similarity; putative; BLASTS TO A HAEMOPHILUS FT PHAGE" FT /db_xref="UniProtKB/TrEMBL:Q87Y11" FT /protein_id="AAO57464.1" FT /translation="MIKLKLPFWLEGLELTKLVTTAQLWWEQATEWLRWPYLQFDADTC FT HLSILELWAWQRDVTRFAAEPESLFRLRVKYAFINSVDAGSTAGLKRILERLGVGYVEI FT QERMPERDWDVVLLTLSDSQLSENPDLLRVLIRQYGRTCRRYDFVTITPVRLAVALVDF FT NDDQQTLVASL" FT /colour=178 58 238 FT gene complement(4521415..4521939) FT /locus_tag="PSPTO_4007" FT /old_locus_tag="PSPTO4007" FT /colour=178 58 238 FT CDS 4525463..4526485 FT /gene="PSPTO4013" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO57470.1" FT /db_xref="GI:28854406" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 4525463..4526485 FT /gene="PSPTO4013" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO57470.1" FT /db_xref="GI:28854406" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 4526482..4527291 FT /gene="PSPTO4014" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO57471.1" FT /db_xref="GI:28854407" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 4526482..4527291 FT /gene="PSPTO4014" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO57471.1" FT /db_xref="GI:28854407" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT VR_#94 4543232..4563495 FT /colour=255 255 0 FT misc_feature 4543843..4563492 FT /note="PHAGE06; putative prophage; putative lysogenic FT prophage region." FT /colour=178 58 238 FT CDS 4562518..4563495 FT /gene="PSPTO4057" FT /note="identified by match to PFAM protein family HMM FT PF02899" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57514.1" FT /db_xref="GI:28854450" FT /translation="MRPRKKDRHLPPCMYLKHGAYYLVRKGKWERLGSDFQEALLAYA FT KIVGGKSNGGMSLLIDEALDAMRRRLSENTIKQYEAASVRLKTYLEEFEPRQVLPRHV FT AALKLHMADTPNMANRVISFLRMVFAYALERQIVDSNPCTGIRRHAEKKRDRYISDAE FT FAAICAASSEYMSVIWEMCFLTGQRISDVLNIKLSDISDVGIAFEQQKTGAKLIVAMS FT PDLKALLDRVHALPRKVRGATLFCARSGGKPVSYDTCKMGFRAACKAAGVKGATIHDL FT RAKSLTDTDRQGNNAQMLGGHTDAKMTKRYLRLREIDIAQPPTMPKKSL" FT /colour=178 58 238 FT MBL 4562518..4563495 FT /gene="PSPTO4057" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF02899" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO57514.1" FT /db_xref="GI:28854450" FT /translation="MRPRKKDRHLPPCMYLKHGAYYLVRKGKWERLGSDFQEALLAYA FT KIVGGKSNGGMSLLIDEALDAMRRRLSENTIKQYEAASVRLKTYLEEFEPRQVLPRHV FT AALKLHMADTPNMANRVISFLRMVFAYALERQIVDSNPCTGIRRHAEKKRDRYISDAE FT FAAICAASSEYMSVIWEMCFLTGQRISDVLNIKLSDISDVGIAFEQQKTGAKLIVAMS FT PDLKALLDRVHALPRKVRGATLFCARSGGKPVSYDTCKMGFRAACKAAGVKGATIHDL FT RAKSLTDTDRQGNNAQMLGGHTDAKMTKRYLRLREIDIAQPPTMPKKSL" FT VR_#95 4566360..4591742 FT /colour=255 255 0 FT CDS complement(4566810..4568270) FT /gene="PSPTO4060" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57517.1" FT /db_xref="GI:28854453" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(4566810..4568270) FT /gene="PSPTO4060" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57517.1" FT /db_xref="GI:28854453" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT CDS complement(4588320..4591742) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_4081" FT /old_locus_tag="PSPTO4081" FT /product="Rhs family protein" FT /note="similar to GP:15130940, and SP:P16919; identified FT by sequence similarity; putative" FT /db_xref="InterPro:IPR006530" FT /db_xref="InterPro:IPR008727" FT /db_xref="UniProtKB/TrEMBL:Q87XU4" FT /protein_id="AAO57538.1" FT /translation="MFEAARLHDGIEHTGALGGLLAGAVIGIAMAVAGAALIVCTAGLG FT AILLGVVLSIGAGAAPAMGESWGAARTTPAGDIMQTGCSPNVFINGRNAALATQTTAKC FT ENHPAPILIADGSTNVFINGHPAARKGDKVTCGAKIGTGSNNVFIGGGTKRYLKVNEEV FT PEALRVAVDIAIIVASMGRAGLPMLTKGLAQGLKAVAPCALKVAALAGGSYLFGRFVAG FT PAINGVIGGFSGNPVDLTSGRKLLLEEGETDFALPGLMPIEWSRFYASDLNVDSVLGKG FT WVLPWEQSLRRNGSFVYLIDNQGRSVPFVNVEPGHSIYNPYEQMHLVRTQGGHYMLQTQ FT DNIFFYFGEVPNDSKPVPLQRIENALGHYLHFSRTEEGTLTDISATGNVHVHLQYEHPL FT GRLTSVKRIVNKEAVETLARYHYDDNGQLSDVYNRNGDSIRSFSYTDGVMTRHSNALGL FT NCYYRWETIDGQPRVVEHWTSDGEHYHYRYDFKQRTSWAVDVLGRELEVHYNEDRRVTS FT GRDYGGEHYTIDIDENGNITGLVLPDDNTLTFKYDHLSRLVEETDPLGRKITYKHHLAT FT TLVTQTTYPDGSTWKARYDSRGNLLIETDALGHKTEYLNSEDGLPHTIIDATYKSKYLW FT WNSLAQVVRFQDCSGKDTHYRYDDRGHLIAVTDALNTTTTLERKPDGEVLRINHPDGSV FT ESFAYNALGQVVSHTNGKGQITRLSRNARGLPTRREDAKGKAVAYQYDKAIRLVALTNE FT NDATYNFAYDNSDRLIEEKRIDNLTRRFSYNLGGHLTQVEEIGYGDKGEQPSRSTFLER FT DPIGRLLAKLNDDARQDYEYDDGDRLLSIQRKQTDTGRKLGVTAEKLEFTYDLLGRLTK FT ETTPQGALTYDYDPLSNLTTLTLPTGQHLNHLYYGSGHLHQLNLDGQLISDMERDDLHR FT EIYRTQGKLTSCFGYDSMGRKAWQYATTLPAEKLSQIQNPLIKPERYVEHAYNSIHRRY FT EYDPAGELSRTLDKLRGETRYEYEANGQLLARNNGLIVDGEEFRYDAAANRLNFNTSRF FT DHVKDNRLKQWRNHEYKYDAWGNLIEKAVGIVRWQTFTYDCENRLVKTETMADTQVEST FT NPPTPLPSPPTQPTSPPSASPPPTSHKYAPDVC" FT /colour=178 58 238 FT gene complement(4588320..4591742) FT /locus_tag="PSPTO_4081" FT /old_locus_tag="PSPTO4081" FT /colour=178 58 238 FT promoter 4621129..4621160 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 4621223..4622890 FT /gene="hopAK1" FT /locus_tag="PSPTO4101" FT /note="previously known as HopPmaH (PMID 11872842; Guttman FT et al, 2002); similar to GP:1783275, and GP:19071494; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAK1" FT /protein_id="AAO57557.1" FT /db_xref="GI:28854493" FT /translation="MNTINRNIYPVSGISAQDAPVQTDQLQPQGQGIRPGHNSNLIDF FT GLIQQANGPHSSLNTSSSRIQPTDTSTSSNRLGGNGDQLLNKLVEAIRNILNNLLSLL FT EGNQHQGSSPAQTQREQTPTSTQSHASPSSSSSSSPSTSSQSSPSVPSTPQGNAEKPF FT VVQSDHPAEKPVSLQRTSEPTSVTPPQTPPQAVERNSITPDKAPAKPEAVKPAVVNDP FT VLPKTSIPAAAKPDSTVTAAKHATPAARGQGADMSGMIGFAKEANTTGGNNGEVVTVN FT TVADLKKYMEDDKARTVKLGANLSADSKVSINFGANKTLLGTDKGNTLHNIYLASGKT FT ASNDIFQNLNFNHDARYRENGDMQMFISSGQKYWIDHITATGTKDQNPKGLDKLLYVG FT GKADNVSLTNSKFQNNEYGVILGQPDDSAAAKAEYKGYPRMTIANNVFSNLDVRGPGL FT FRQGQFDVVNNSIDKFHLGFTATGNATILSQANYFSNGVDVSNKASNSGVLDDYGDAH FT FKDIGSNVSFTQKSPVTAWTPSYNRDVKTAEAARAYDLANAGAQVVK" FT /colour=255 0 0 FT gene 4621223..4622890 FT /gene="hopAK1" FT /locus_tag="PSPTO4101" FT /colour=255 0 0 FT VR_#97 4677500..4685000 FT /colour=255 255 0 FT CDS 4679391..4680368 FT /gene="PSPTO4152" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO57608.1" FT /db_xref="GI:28854544" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 4679391..4680368 FT /gene="PSPTO4152" FT /colour=178 58 238 FT CDS complement(4683672..4684577) FT /gene="PSPTO4156" FT /note="similar to GP:9949675, and SP:P46233; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="sodium-type flagellar protein MotY, putative" FT /protein_id="NP_793917.1" FT /db_xref="GI:28871298" FT /translation="MRQRYLALLSLFASLPAMAISFQTRLESIEWKVEGDQFECRLTQ FT PITDFGAGEFVRRAGEQATFRLKASYNMLGNGSATLLAAAAPWQPGRGDINLGSVRVS FT NGDIPFNTSQAQAGRLISGLMDGRSPLIRHYNRDGGQMEVRLLPVKFSKAFSDYQACT FT AKLLPMNFDQVKQAEVGFPGGGIELDANAKARLDNMVAYLKADPTVNRIELDGHSDNS FT GNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNTNNANRARNRRVN FT VHLERVAPDERPVPVASSASAAHTS" FT /colour=152 251 152 FT FLAGELLA complement(4683672..4684577) FT /gene="PSPTO4156" FT /colour=152 251 152 FT promoter 4684462..4684494 FT VR_#99 4712006..4722967 FT /colour=255 255 0 FT misc_feature complement(4728366..4728492) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="7.5e-12" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=37.000000 FT misc_feature complement(4728647..4728782) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="7.9e-14" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=43.500000 FT misc_feature complement(4738270..4738407) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="3.2e-11" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=34.900000 FT CDS complement(4756035..4756991) FT /gene="mucB" FT /note="similar to SP:P38108; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="sigma factor algU regulatory protein MucB" FT /protein_id="NP_793983.1" FT /db_xref="GI:28871364" FT /translation="MRAVPLLPLLLGGWLALPVQADDAQDAINRLAKVDQQQSYQGTF FT VYERNGSFSTHRIWHRVADGTIQERLLQLDGSAQEAVRLGGLTQCVSGTLEAGVTSPA FT VAAPRAFDLKRLSAWYDIKTVGKSRVAGRPTTIVALSPKDQHRYGLELHLDNETGLLL FT KSLLLSERGQLLERFQFTDLDTSSVLSEQMLKAGADCKPVTVAKPKPEPSTPVAWHSD FT WLPPGFEVSSSSVRKDPATQSSVTRLMYGDGLAQFSVFVEAVKGASSSDIRTQLGPTV FT AVSRRLTTPQGDMMVTVVGEVPMGTAERIALSMRNDETPVKK" FT /colour=0 255 0 FT CW_VIR_gene complement(4756035..4756991) FT /gene="mucB" FT /colour=0 255 0 FT /note="locus_tag: PSPTO4222" FT CDS complement(4757000..4757590) FT /gene="mucA" FT /note="similar to SP:P38107; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="sigma factor algU negative regulatory protein FT MucA" FT /protein_id="NP_793984.1" FT /db_xref="GI:28871365" FT /translation="MSREALQESLSAVLDNEADELELRRVLNAIDDADTRATWSRYQV FT ARAAMHKELLIPHLDISAAVSAAIADEVSPLKAARGPWRTLGRLAVAASVTVAVLAGV FT RLYNQDDIAGAQLAQQTQQPANLTVPQVKGPAVLAGYTESAEQAPGPMANGVLQGAGQ FT GDQRLPGYLRQHAQEAALKGTESALPYARAASLENR" FT /colour=0 255 0 FT CW_VIR_gene complement(4757000..4757590) FT /gene="mucA" FT /colour=0 255 0 FT /note="locus_tag: PSPTO4223" FT VR_#100 4785000..4822500 FT /colour=255 255 0 FT VR_#100 4785000..4822500 FT /colour=255 255 0 FT tRNA 4787411..4787484 FT /gene="tRNA-Gly-5" FT /product="tRNA-Gly" FT /note="codon recognized: GGG" FT CDS complement(4790778..4792331) FT /gene="PSPTO4251" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57705.1" FT /db_xref="GI:28854642" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(4790778..4792331) FT /gene="PSPTO4251" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57705.1" FT /db_xref="GI:28854642" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(4792349..4792708) FT /gene="PSPTO4252" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57706.1" FT /db_xref="GI:28854643" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(4792349..4792708) FT /gene="PSPTO4252" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57706.1" FT /db_xref="GI:28854643" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(4793542..4794519) FT /gene="PSPTO4253" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO57707.1" FT /db_xref="GI:28854644" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(4793542..4794519) FT /gene="PSPTO4253" FT /colour=178 58 238 FT CDS 4807947..4808969 FT /gene="PSPTO4269" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO57722.1" FT /db_xref="GI:28854659" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 4807947..4808969 FT /gene="PSPTO4269" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO57722.1" FT /db_xref="GI:28854659" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 4808966..4809775 FT /gene="PSPTO4270" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO57723.1" FT /db_xref="GI:28854660" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 4808966..4809775 FT /gene="PSPTO4270" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO57723.1" FT /db_xref="GI:28854660" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT promoter complement(4820136..4820168) FT CDS complement(4822443..4823687) FT /codon_start=1 FT /gene="pnlA" FT /locus_tag="PSPTO4283" FT /orf_name="PSPTO_4283" FT /product="Pectin lyase" FT /function="lyase activity" FT /protein_id="AAO57734.1" FT /db_xref="GO:0016829" FT /db_xref="HOGENOM:HBG421822" FT /db_xref="HSSP:1QCX" FT /db_xref="InterPro:IPR002022" FT /db_xref="InterPro:IPR011050" FT /db_xref="InterPro:IPR012334" FT /db_xref="TIGR:PSPTO4283" FT /db_xref="UniParc:UPI0000009268" FT /db_xref="UniProtKB/TrEMBL:Q87XA5" FT /transl_table=11 FT /translation="MKSCFMQCAAAMLLTLAGPQYLPAADLPEGFAKGVTGGGSAADVH FT PSTLDDLRSALCASHDAHGACTDQTPRVIVLDHLFDFRGSVVANGSAETTAPGCVVKPC FT AQGGEQLALNGANDFCQSRPAVMVTYDNAGLKPLKVGSNKTLIGAGTKAGIAGTGLFIG FT DGAHNVIVRNLTLSDINPSVVWGGDALTLNKADGVWIDHNTFARIGRQMIVTGWGTASH FT VTISSNEFDGRTPYSSTCDGHHYWVWLFLGSQDTLTLSRNYLHDTSGRAPHSGGMKNAQ FT IRAQLVNNVFQRMTYQGAIMSRTSSSQLLVEGNDFENVAHPLFNDTDQPGTAFALFEPV FT SAAANSTCMSVIGRLCIANQQRASGEDYRPQDASALQAFRDYRQYLVVPVSAQEARARV FT PGEAGAGKVGVGLRP" FT /color=0 255 0 FT gene complement(4822443..4823687) FT /gene="pnlA" FT /locus_tag="PSPTO_4283" FT /old_locus_tag="PSPTO4283" FT /color=0 255 0 FT CDS 4827116..4828339 FT /note="Expression detected by direct sequencing of mRNA FT from iron-limited culture" FT /product="xaxA, putative" FT CDS 4827116..4828339 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5625" FT /product="binary cytotoxin component, putative" FT /note="similar to GP:80558283; identified by sequence FT similarity; putative" FT /db_xref="UniProtKB/TrEMBL:A7WK45" FT /protein_id="ABV02588.1" FT /translation="MLSQAALLENEDIARVTLKPVEYLSVILDDEKNGGRSAALILTRE FT DILSLKRYERHALNIPTSLPRVEQQLGFTKSGIPGLEPKDMLVTYQAINNHGKSWLGIE FT DGIKRSGFAIDLFAAQFSGQGQQIINYIEKMDFARQLDLTVADLTIEEVREKNPTPLGE FT TDQKVCITLAAFLKKTASQIKNHQHAAGTLAQHIDTFSTVLSVQLIPGINDKVKLARRS FT GLDQQLKELEKDIEQLTKEIEQKNKEYKFSMNNIAWGGFGGPIGVAITGGIFGAKAEKI FT RKEKNRMVDSKNQKVQTLKEKVPLAAAVRSLQILFEDMNIRMMDAHQSATHLKDLWTML FT AAYIDSSANELAAITDDQALMIFAMQFQGVVTPWLEIRGMTTQLLKIFDSALDQFQREQ FT QPVVVVGR" FT CDS 4828342..4829352 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_4287" FT /old_locus_tag="PSPTO4287" FT /product="binary cytotoxin component, putative" FT /note="similar to GP:80558284; identified by sequence FT similarity; putative" FT /db_xref="UniProtKB/TrEMBL:Q87XA1" FT /protein_id="AAO57738.1" FT /translation="MSTDTLDKALILTPPAPETMNAARQNILAQTSALKLDFLPVMKEK FT MLPLQTALKRADKVYHDNLAAVTVQLNSVNLQPIDLKQQQIEADQRLSDKQKQQAISLL FT NAQRIRQVSNLTMVVRNSAKAIAEHSDDMAQINLKLEGNRLLEILQEQIDSMTLRSASL FT ESTMGEITADRRLLDATIKTFEKYNVADVFKEMLPTAEELKLVALPSPELALVTAGIAR FT LGKLLDKVSSALTYLDLIEERDRLRLRYNALLEESRIAHQEAKATAAKLDELTGLAGVS FT QSKALWVEEAKKVYQSLYNFLEQITQQDDSSAKISQHVEHLKTYIKSFYDTKRFV" FT VR_#101 4870000..4885000 FT /colour=255 255 0 FT CDS complement(4879876..4880313) FT /gene="PSPTO4328" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPs1, transposase OrfB" FT /protein_id="AAO57779.1" FT /db_xref="GI:28854716" FT /translation="MVCDANGVPLRFILSAGQASDIAHAQPLLDQVRISGKPGRPRKR FT SRWLLADKGYDAEHLRQYCDRYRMQPVIPLRAMPRKPRPGLPRLFDLPKYRQRNIIER FT MFGWLKENRRIGTRYDKLARSFAAMVTLACSLRCMRQYFSYKT" FT /colour=178 58 238 FT CDS complement(4879876..4880313) FT /old_locus_tag="PSPTO4328" FT /codon_start=1 FT /locus_tag="PSPTO4328" FT /orf_name="PSPTO_4328" FT /product="ISPs1, transposase OrfB" FT /function="DNA binding" FT /function="transposase activity" FT /biological_process="DNA transposition" FT /protein_id="AAO57779.1" FT /db_xref="GO:0003677" FT /db_xref="GO:0004803" FT /db_xref="GO:0006313" FT /db_xref="HOGENOM:HBG304373" FT /db_xref="InterPro:IPR002559" FT /db_xref="TIGR:PSPTO4328" FT /db_xref="UniParc:UPI0000009295" FT /db_xref="UniProtKB/TrEMBL:Q87X60" FT /transl_table=11 FT /translation="MVCDANGVPLRFILSAGQASDIAHAQPLLDQVRISGKPGRPRKRS FT RWLLADKGYDAEHLRQYCDRYRMQPVIPLRAMPRKPRPGLPRLFDLPKYRQRNIIERMF FT GWLKENRRIGTRYDKLARSFAAMVTLACSLRCMRQYFSYKT" FT /color=178 58 238 FT MBL complement(4879876..4880313) FT /gene="PSPTO4328" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPs1, transposase OrfB" FT /protein_id="AAO57779.1" FT /db_xref="GI:28854716" FT /translation="MVCDANGVPLRFILSAGQASDIAHAQPLLDQVRISGKPGRPRKR FT SRWLLADKGYDAEHLRQYCDRYRMQPVIPLRAMPRKPRPGLPRLFDLPKYRQRNIIER FT MFGWLKENRRIGTRYDKLARSFAAMVTLACSLRCMRQYFSYKT" FT CDS complement(4880361..4880729) FT /gene="PSPTO4329" FT /note="similar to GP:5912506; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPs1, transposase OrfA" FT /protein_id="AAO57780.1" FT /db_xref="GI:28854717" FT /translation="MAKRYELSDASWELIKDLVFPEQKMGRPRSDDRLVLHGILWILC FT SGAAWRDLPERFGPWSTVYQRFRDWRDDGTFDRILERLHIRLNREGLIDLDTWMIDST FT AVRATRASSGAGKKGGLKNR" FT /colour=178 58 238 FT CDS complement(4880361..4880729) FT /old_locus_tag="PSPTO4329" FT /codon_start=1 FT /locus_tag="PSPTO4329" FT /orf_name="PSPTO_4329" FT /product="ISPs1, transposase OrfA" FT /protein_id="AAO57780.1" FT /db_xref="HOGENOM:HBG345676" FT /db_xref="TIGR:PSPTO4329" FT /db_xref="UniParc:UPI0000009296" FT /db_xref="UniProtKB/TrEMBL:Q87X59" FT /transl_table=11 FT /translation="MAKRYELSDASWELIKDLVFPEQKMGRPRSDDRLVLHGILWILCS FT GAAWRDLPERFGPWSTVYQRFRDWRDDGTFDRILERLHIRLNREGLIDLDTWMIDSTAV FT RATRASSGAGKKGGLKNR" FT /color=178 58 238 FT MBL complement(4880361..4880729) FT /gene="PSPTO4329" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:5912506; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPs1, transposase OrfA" FT /protein_id="AAO57780.1" FT /db_xref="GI:28854717" FT /translation="MAKRYELSDASWELIKDLVFPEQKMGRPRSDDRLVLHGILWILC FT SGAAWRDLPERFGPWSTVYQRFRDWRDDGTFDRILERLHIRLNREGLIDLDTWMIDST FT AVRATRASSGAGKKGGLKNR" FT promoter 4881097..4881129 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 4881167..4881802 FT /gene="hopE1" FT /locus_tag="PSPTO4331" FT /note="previously known as HolPtoV (PMID 11872842; Guttman FT et al, 2002) and HopPtoE (PMID 12032338; Petnicki-Ocwieja FT et al, 2002)." FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopE1" FT /protein_id="AAO57782.1" FT /db_xref="GI:28854719" FT /translation="MNRVSGSSSATWQAVNDLVEQVSERTTLSTTGYQTAMGRLNKPE FT KSDADALMTMRRAQQYTDSAKRTYISETLMNLADLQQRKIYRTNSGNLRGAIEMTPTQ FT LTDCVQKCREEGFSNCDIQALEIGLHLRHKLGISDFTIYSNRKLSHNYVVIHPSNAFP FT KGAIVDSWTGQGVVELDFKTRLKFKHREENYAVNANMHEWIERYGQAHVID" FT /colour=255 0 0 FT gene 4881167..4881802 FT /gene="hopE1" FT /locus_tag="PSPTO4331" FT /colour=255 0 0 FT VR_#102 4891381..4912493 FT /colour=255 255 0 FT promoter 4905189..4905221 FT CDS 4910862..4911839 FT /gene="PSPTO4347" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO57797.1" FT /db_xref="GI:28854734" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 4910862..4911839 FT /gene="PSPTO4347" FT /colour=178 58 238 FT VR_#103 4945000..4957500 FT /colour=255 255 0 FT CDS 4946342..4948633 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_4385" FT /old_locus_tag="PSPTO4385" FT /product="Rhs element Vgr protein" FT /note="identified by match to TIGR protein family HMM FT TIGR01646" FT /db_xref="InterPro:IPR006533" FT /db_xref="UniProtKB/TrEMBL:Q87X05" FT /protein_id="AAO57835.1" FT /translation="MLDANATHIALTLEGISVDFQVLSFLGSEALNQPFCFDIELVSAR FT PDLKLEELLHKRGCLTFGATGNGLVHGLVYRITQGDSGKSLTRYSIRLVPQLSYLRHNH FT DQQIFQHLTVPKIIAKVLEARGILADAYRFQLGATYPKRDYCVQYDESDLHFIQRLCEE FT EGIHFHFQHSASGHTLVFGDDQTVFRKLAPVSYQQDSGMAAERPVIKRFNLRLETRTTR FT VSRRDYDFEKPSILPQGSAKIAASPDLEDYDYPGRFTDSERGKQLSTRALERHRADYAL FT VEGKGDEPTLVSGHFLALSEHPRAEWNDLWLLLEVIHEGKQPQVLGENVTSDVTDNKDD FT FHQGYHNRFLATPWDAHYRPALEHPKPKALGIQTAFVTGPPGEEIHCDEYGRVKVQFHW FT DRDGQANDNSSCWLRVATGWAGNAYGGITTPRVGMEVLVTYLEGDPDQPLITGCLFHKE FT NVAPYDLPANKTRSTFKTLSSPGGKGYNEFRIEDKKGAEQIYLHAQRDWDENIEHDQKI FT RVGNERHDTVEANTLSEFKLEEHRITHLDRKSEARADDHLTVGATRHVKIGTAQFVEAG FT TEIHYHAGNKVVVEGGVELTVKAGGSFVKIDAGGVTISGPEAKVNTGGSAGVGAGIGIL FT APLIPGLAAADAAGNLMKEAKANPTWLELNLHYDNLEPVPGASYRVDFADGSKREGVLD FT DDGFARLENVPQGPAKIYYGENPRPFNREGVTVAQNSDEKVNQDLRKLGLDPDQIDLPA FT LVEKVAGRVS" FT /colour=178 58 238 FT gene 4946342..4948633 FT /locus_tag="PSPTO_4385" FT /old_locus_tag="PSPTO4385" FT /colour=178 58 238 FT CDS complement(4953854..4955407) FT /gene="PSPTO4389" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57839.1" FT /db_xref="GI:28854776" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(4953854..4955407) FT /gene="PSPTO4389" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO57839.1" FT /db_xref="GI:28854776" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(4955425..4955784) FT /gene="PSPTO4390" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57840.1" FT /db_xref="GI:28854777" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(4955425..4955784) FT /gene="PSPTO4390" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO57840.1" FT /db_xref="GI:28854777" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT misc_feature complement(5004950..5005076) FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="2.9e-09" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=28.400000 FT promoter 5024215..5024247 FT promoter 5024215..5024247 FT CDS complement(5050863..5052323) FT /gene="PSPTO4485" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57934.1" FT /db_xref="GI:28854872" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(5050863..5052323) FT /gene="PSPTO4485" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO57934.1" FT /db_xref="GI:28854872" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSHEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT tRNA complement(5061291..5061367) FT /gene="tRNA-Met-5" FT /product="tRNA-Met" FT /note="codon recognized: AUG" FT tRNA complement(5061463..5061548) FT /gene="tRNA-Leu-4" FT /product="tRNA-Leu" FT /note="codon recognized: CUC" FT CDS 5081470..5081871 FT /gene="PSPTO4510" FT /note="This gene assignment is based in part on its FT position within a multicopy insertion sequence directly FT adjacent to an ORF matching several IS3 family FT transposases usign a blastp analysis.; identified by match FT to PFAM protein family HMM PF04218" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfA" FT /protein_id="AAO57958.1" FT /db_xref="GI:28854896" FT /translation="MDSGKRRSQRDYTLAFKLSVVDQVEKGELSYKEAQRRYGIQGRS FT TVLVWLRKHGRQDWSQGASIREQRSRSMTEPTLPPTPEQRIKELEEQLELSNQKAQFF FT EAVVNVLKNDYGVSVVKKPPGKSSRKGKSKT" FT /colour=178 58 238 FT MBL 5081470..5081871 FT /gene="PSPTO4510" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="This gene assignment is based in part on its FT position within a multicopy insertion sequence directly FT adjacent to an ORF matching several IS3 family FT transposases usign a blastp analysis.; identified by match FT to PFAM protein family HMM PF04218" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfA" FT /protein_id="AAO57958.1" FT /db_xref="GI:28854896" FT /translation="MDSGKRRSQRDYTLAFKLSVVDQVEKGELSYKEAQRRYGIQGRS FT TVLVWLRKHGRQDWSQGASIREQRSRSMTEPTLPPTPEQRIKELEEQLELSNQKAQFF FT EAVVNVLKNDYGVSVVKKPPGKSSRKGKSKT" FT VR_#104 5081470..5115360 FT /colour=255 255 0 FT CDS 5081895..5082692 FT /gene="PSPTO4511" FT /note="identified by match to PFAM protein family HMM FT PF00665" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfB" FT /protein_id="AAO57959.1" FT /db_xref="GI:28854897" FT /translation="MGISRQAYYKRNRAFDARVCQDQEVVDFVLEKRRRQPKLGTRKL FT HYLMSVEAPASLCVGRDRMFTILRGARELVPRKRAYHKTTHSHHRFRRHPNLLKAGPE FT QVVANGPEQVWVADITYLPTQESVAYVSLVTDAYSRKIVGHHVHESLHAQSVMKALEK FT AVGERKTDQMLIHHSDRGAQYCSDLYQQLHTRHGIRCSMTDGYDCYQNAMAERVNGIL FT KTEFLLHRPKDLADAVKMVDESVQIYNGERPHLSLKYKTPDAVHRAF" FT /colour=178 58 238 FT MBL 5081895..5082692 FT /gene="PSPTO4511" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00665" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfB" FT /protein_id="AAO57959.1" FT /db_xref="GI:28854897" FT /translation="MGISRQAYYKRNRAFDARVCQDQEVVDFVLEKRRRQPKLGTRKL FT HYLMSVEAPASLCVGRDRMFTILRGARELVPRKRAYHKTTHSHHRFRRHPNLLKAGPE FT QVVANGPEQVWVADITYLPTQESVAYVSLVTDAYSRKIVGHHVHESLHAQSVMKALEK FT AVGERKTDQMLIHHSDRGAQYCSDLYQQLHTRHGIRCSMTDGYDCYQNAMAERVNGIL FT KTEFLLHRPKDLADAVKMVDESVQIYNGERPHLSLKYKTPDAVHRAF" FT CDS 5088445..5093706 FT /gene="PSPTO4518" FT /note="This gene is aparrently the initiating component of FT a non-ribosomal peptide synthetase (due to the presence of FT an initial non-amino acid adenylation/ligase domain) and FT is most likely associated with the following gene which FT appears to be a terminating component. This gene contains FT a thiolation domain as well as one complete amino acid FT activation, thiolation and condensation domain modules FT which appears to be specific for serine according to the FT prediction algorithm at http://raynam.chm.jhu.edu/ FT nrps/index2.html. Taken together these two genes appear FT to direct the biosynthesis of a previously undescribed FT natural product.; similar to GP:1171128; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="non-ribosomal peptide synthetase, initiating FT component" FT /protein_id="NP_794271.1" FT /db_xref="GI:28871652" FT /translation="MDKPTALHFNTFLDVVRYRATHDSVNAERLAFTYLADGESVSDS FT LTYVQLDQKARSLAAHLQRHTRPGDRVLLVYPPCMEYTIAFYACIYAGVIAVPALSPA FT NAKTLPRLHLIAQDSQPALALTMDAVLTGLQRIVTDDNTPNLLTDITWLSSNLLVDAS FT ADWQCPPTVASDIVFLQYTSGSTGAPKGVMVSHANLLANVELSKQTYRIREQDVFVSW FT LPAHHDFGLIGAIILPVYMASHCVQFPPAAFVMRPYRWLKLISDYRARITGGPNFAFQ FT LCVQRVTEEQKQSLDLGSLEIAVNGAERIRPGTLRSFVEAFSGCGLKPHAMVPAYGMA FT ESVLLVTANTQTPIGQLPRMRTISKSALENGQVRPERHATDAVELVATGTEITGDHRV FT GIFHPQHALRLAAQQVGEIWISGPSTARSYWRQEAESQVFNTRAEGDETRWFRTGDLG FT FVNDGDLYITGRLKEVMIFSGRNIYPQDIEITVEAIDPAFRANGCAAFSIENGEVSQL FT VVVQELESRQHVEFDSVMPRLRAELADRHEVFDLAAVLLVKTGTLPRTSSGKIQRARC FT RDLFEAAELKPIWSWSREDEGHQADTRSSAHLTEIEAQLLSIWQTTLDRQDISSTDSF FT FLLGGHSLLATQMMMEVRKRFNVDLALSVLFHSPTLHQLAAEISNARPPSGQSLPAIA FT RAPHQVPVPLSYAQQRFWFLDQYQPDNPFYSLPLALTIDGPLDAEIVQQVVNLLVMRH FT TPLRTLFKREGGVLQQHILPVLKVPVTHVDFSQSGDQAACAIAEAIRQEAYQPFNLAQ FT GPLIRARLLQSAPQRHVLLLTLHHISCDGWSSNVLQHEFSALYDALVHDQPAALPALP FT FEYTDYTLWEQQHIAGPWLEEKLAFWRAHLANAPTSLDLQTDFPRHENTRQEGDVRTI FT QVPQELVRQLETFARLNNATVFMVMVTAMNVLLQRMTGQRDLCIGVMSANRPEGTEGL FT IGNFINVVPLYSHIKGDEAFSNLLKTTSRQLLAAYDQQIPFELILKHLAPPRQTGGTP FT YAQFVMNFHNEIAEPTPRPGLQRSSGVSLVGHHPSTVNHAAFELKMEVHSTTRNLSIA FT FEYNKELYTPSTIDRVMNHFLVLLTGATGQPQVPVNTLPLLHENERRQLTSLWNDTDR FT DYPLGQTLHGLFEQQVERTPEAIALVFEAEQLSYSQLNTRANQLAHRLLDYGVGLDSR FT VALCIERSAQMVITLMAILKAGGAYVPLDPGYPTERLAYMLDDSKPDVLVSQESVRDC FT LPEHSVPTLWLETEEQEIAGCSSHNLTIGDTDSLAYCIYTSGSTGRPKGVMNAHGAVV FT NRLQWMQEQYALSNQDRVLQKTPFSFDVSVWEFFWPLIQGARLVICKPEGHKDPSYLW FT NLIGQQGVTTAHFVPSMLQAFLKTGPAQPADSLRHVFSSGEALPVAVANEFLERYRHT FT RLHNLYGPTEAAVDVSYWECQPDYRHPLVPIGRPVANTRLYILDETLQPAPIGVIGDL FT YIAGVQLARGYFGRPDLTAERFIPDPNDNHGGRMYLTGDRGRYLPSGDIQYLGRIDHQ FT IKIRGFRIEPGEIENALLQCPTVREAVVVPRDDAFGGQYLVAYIASSVSEPDAAQLRK FT QIGKILPDYMQPSFYVVLAALPLSANGKIDRQALPPHEQIAQSLARDYLAPTTATEKS FT LVSLWQETLKVPRVGINDSFFELGGHSLLATQILASVQQTFSVSLPLKHLFESPTVAA FT MAAYIDQAARTPRASAPPIKRLTRNQT" FT /colour=135 206 250 FT NRPS 5088445..5093706 FT /gene="PSPTO4518" FT /colour=135 206 250 FT CDS 5093815..5104113 FT /gene="PSPTO4519" FT /note="This gene is aparrently the terminal component of a FT non-ribosomal peptide synthetase (due to the presence of FT the terminal thioesterase domain) and is most likely FT associated with the previous gene which appears to be a FT initiating component. This gene contains three complete FT amino acid activation, thiolation and condensation domain FT modules and appears to be specific for glycine, an FT unidentified amino acid and serine according to the FT prediction algorithm at http://raynam.chm.jhu.edu/ FT nrps/index2.html. Taken together these two genes appear FT to direct the biosynthesis of a previously undescribed FT natural product.; similar to GP:6563397; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="non-ribosomal peptide synthetase, terminal FT component" FT /protein_id="NP_794272.1" FT /db_xref="GI:28871653" FT /translation="MRCIKNRTSWTENQKRFRVMSADQFSTSFAQQRLWFLEQYEPGT FT GLYNIPAACRINGVLRLDILERSLNAIIERHEALRTSFSVDKDLPVQVIMREAPVLIR FT PVKLAALLERNLTLQQFMDDEAASPFDLTQAPLIRATAIEVRADEHVLLLTLHHIVAD FT GWSMSVLLDELSRLYNAELNGVAADLQALEIHYADYAVWQREWLQEEVVQPQLDYWET FT QLKDAPSVLELPTDRPRPARLDYAGNRVHFTLPAELGAQLQELSQRHHVTLFTTLICA FT FNTLLLRLSNQPDICIGYPVANRGRAEIQPLIGFFVNTLVLRSQMSTQQTFAAYLQQT FT QSTLLDSDLNQDIPFERLVEALRPARELNHSPLFQVLFSFFNQDLAGGLTLSGTTSGT FT LEQNCRFSKFDLSLEMNTRQNTLGGFFEYRTALYDQATIERMSGYYRVLLESIVVDTT FT ARIGDLEILPLQERLSRLATAPTPAHTLSADQCVHDLVLTQARATPDATAILCAGQEV FT SYRQLEQQATAIADRLIALGAGPETCVAICLDRSVTMVAALLGTWMAGAHYVPMDPGY FT PHARLLHMLQDSKARILLSERPHVQAFSAAAVQIVLLDEVQSNPRPSDIRHPVAALNT FT AYVIYTSGSTGLPKGVQVPHRAVVNFLLSMTNQPGINAGDRLLAVTSISFDISVLELF FT LPLISGASLVLADSEAAADGQALIKLAMHQDVTFIQATPSNYWLMLEAGWPSTLKLKV FT LCGGEALPPVLAQKLLQRSDSVWNMYGPTETTIWSAISRVTGSASTLGRPIANTVLRV FT LDENARLCATGSPGELHIGGEGVARGYLDRADLTAQKFVPDPYASGSGARIYKTGDLV FT RWLPNGEIEFLGRIDHQVKVRGFRIELGEIETRLVSFPSVRQGAVIVREDQPGDQQIV FT AYLLVGEQYAAEPEQLRHHLAQTLPGYMIPNHFVVLEQFPLTPNGKLDRKRLPAPNTT FT PPGANRVLPGTPMEKAVADIWQHVLNLEGVGITDNFFELGGHSILATQVVSRLRNTLQ FT IELSVRTLFEAPTIAQLIASLGSPTVRQAQSIIPRSPSQHRQPLSYAQERLYFLDQFE FT PASAAYTIALALELNGPLEASLLHRCLNELIRRHEPLRTTFVLDADGKPQAQVHPEAL FT SQLVYRDLRHHSTPYLLAQTQANAEAQHLFSLEKGPLFRASLLQTGEQQHILLLTLHH FT IVSDGWSVAVLAREVMALYQAFAQGQPSPLAPLDIQYGDYAAWQREWQAPIEFASKTD FT YWSCHLAQAPTTLELPTDRPRPAIQTYRGRVISRSLGKTLSARIDALSQAQEGTPFMT FT LLALFNVLLNRYSGQQDIVIGTPIANRTRPEIEPLIGLFVNTLAMRIRLEGNPTFSEL FT LGQVRDTTLNAYAHQELPFEKVVESLAIPRDMSRSPLFQVLFVLQNTALEAMNLPGLE FT IGNFALESTTAKFDLTLELTPSSEGYQMRWEYNSDLFDADTIERMTRHFETLARSAIS FT DPSQPAQRLSMITAQEKQHILHEWNATQQVYRPLAVHQLFTEMSEPCADLPAVMFGTA FT SMSYRQLEARSNQFAHYLQRSGVLPGTLVGICLERSMHVPVAILAVLKAGAVCVPMDP FT SYPTERLRFMAQDARADLIITLTTLRPRVEGCSHTIICMDQCADAWHEPSSNPARPQN FT LLDLCYVIYTSGSTGLPKGAALTHEMLTNLVQWQLTESRLSRGDNTLQFSPLSFDVSF FT DEFFSTWASGGTLVMVSEDTRRDPVLLLELIQRQNIARLFIPFVALQGIADAARDVDK FT LACLKEVVCGGEQLQVTQEVVDLFQKLPDALLHNQYGPTESHFVTGYRLSGDATQWPA FT LPPIGKPLFNSQMYVLDASLEPVPVGVRGDLYIAGVHLARCYWERPDITAERFVPNPH FT SLSPGARMYKTGDVARYLPDGNIEYLGRSDHQVKIRGFRIELAEVEQALMAQETVASA FT AAMVREDRPGLKKLVGYLVAKSDCTLNIVDIKEHLRRTLPDYMVPTTFVILPTLPLTP FT SGKVDKRSLPQPENDNHENQYVAPRSDAERQLAAIWASVLNLSQVGITDDFFELGGHS FT LLATQVVSRIRKQLNVDMALRTLFEAPTIEQLLPRLSTSPVVTLSAITATNTGSGMKV FT ASYAQERLFFLNRLDRSSTAYNIALALELNGPLKKPVLQQCLDELIRRHEPLRTTFAL FT QEDGQVVSLVHPPQLDTLISLDLRHTAQPLSVAEKQVRDHASQLFSLETGPLLRVLLL FT QVADEHHILLFTVHHIIADGWSIAVLTREIMALYQAFSTDQASPLPPLEIQYSDYAFW FT QRSLQAPSVFAAQVGYWRQQLDQAPARLELPTDRPRPAIQTYRGQAVTHTWPPTLSKK FT IDTLSQSLGVTPFMTLLTLFSLLLSRHSGQRDIVVGTPIANRTRTEVEPLIGLFVNTL FT ALRTRIEGNPTFRQLLQQVRNTTLGAYAHQDLPFEKVVEALDTPRNMSHSPLFQVMFV FT LQNTAPEPLKIPDVEVRIFDIGTTTAKFDLSLELTPTVQGYQVRWEYNCDLFDATTIE FT RLAAQFQTLAESAVLDAQKTVASLDLLSASEKNRMLEQWNATKVSHRPVAALHHLFEQ FT QVEQTPDAIAVSFEGQHLSYGALNEAANQLAHYLISRGTRADDLIAICMERSVEMVVS FT LLGVLKAGGAYVPIDPHYPEERIAYMLADAAPILTMTQRSLLKLTALQRTDSLCLDEH FT ATSLAHLPKTNPQRLIDPACLAYCIYTSGSTGAPKGSLNSHEAIINRILWMQDTYLLD FT ATDRVLQKTPFSFDVSVWEFFWPLSVGARMLLAKPEGHKDPRYLETLIEREGVTTAHF FT VPSMLSAYMALTQASHTRALRRVFSSGEALSTSVQNEFFKRYPATQLHNLYGPTEAAI FT DVTHWHCQAGDVGHAVPIGRPVANTRTYILDETLQPVPIGVTGNLYLAGVQLSRGYLK FT RVDLTAERFIPDPHGTPGSRMYMTGDTARYRAHGEIEYLGRNDQQIKLRGFRIELGEI FT EMQLCAHPQVSQAVVSVNTSDADNPTLTAYLVCNADTQPSVDELRECLARTLPDYMAD FT VCFQFLDHLPLTSNGKVDRRALPQPVSAVRDQAIQLLAPRTALEKSVAAVWKNTLNLE FT FISLNDNFFHEGGHSLLAMKMIDQVNRELGLAARVRDIFESATLGAFIEKISQGIGER FT GSNRIRLKQGTRRHLFLVHAVGGVVSPYIKLSQLMPDDVSVHAFQAGGLEHGTDVVDT FT LEKMAAIYIEQMLEIQPEGPYWLGGWSMGGVIAFEMARQLEALDREVRQLLLIDAPAP FT GHAAQEQTWPLGAYLMDMARSLSVDLPLSASEMNQLIEHPDRDVLAIATMRRIGVIPD FT SMDDQQVSRRLQIFCTHQQALEAYRPKTGINSNLTLLHTEESAELRDKWRPLCGQSFN FT ATGFTADHYSILEAATPCISKLFN" FT /colour=135 206 250 FT NRPS 5093815..5104113 FT /gene="PSPTO4519" FT /colour=135 206 250 FT CDS 5159584..5159943 FT /gene="PSPTO4566" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58013.1" FT /db_xref="GI:28854951" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 5159584..5159943 FT /gene="PSPTO4566" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58013.1" FT /db_xref="GI:28854951" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT VR_#105 5159584..5172500 FT /colour=255 255 0 FT CDS 5159961..5161514 FT /gene="PSPTO4567" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58014.1" FT /db_xref="GI:28854952" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 5159961..5161514 FT /gene="PSPTO4567" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58014.1" FT /db_xref="GI:28854952" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT VR_#106 5185000..5240144 FT /colour=255 255 0 FT CDS complement(5185073..5185606) FT /gene="hopS2" FT /locus_tag="PSPTO4588" FT /note="Previously known as ORF15 (PMID 12032338; FT Petnicki-Ocwieja et al 2002) and HolPtoZ2 (PMID 12615215; FT Greenberg and Vinatzer, 2003)." FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopS2" FT /protein_id="AAO58034.1" FT /db_xref="GI:28854972" FT /translation="MKKSGAGTQAYALFASATGSSSKGVLSTIARHLTGCFAPNKTAL FT HSATAVSYELLPGNYSVAASVHGLSVDHRQPALTRLSNVLFNQALALDLERFDEGAPA FT DEMFRPSLKREGAHPRLADSLGGEQLAVQTMEKGLKRLAEDPAQSFARCHSFFYPISS FT DTTSPQASLHSVASSSG" FT /colour=255 0 0 FT gene complement(5185073..5185606) FT /gene="hopS2" FT /locus_tag="PSPTO4588" FT /colour=255 0 0 FT CDS complement(5185621..5186094) FT /gene="shcS2" FT /locus_tag="PSPTO_4589" FT /note="identified by Glimmer2; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III chaperone ShcS2" FT /protein_id="AAO58035.1" FT /db_xref="GI:28854973" FT /translation="MIAFATGLLEHSLKRLGYDAADLQSLRDEGYLLWHGKNGHTSLL FT VPAAGGDALFVISTLSYIDPEQDGRLLALALHLNLSPAHTLGASIALDIEQNTLCLRY FT THDLTGHGTDNLSRALESTQALAEQIKQVIETFRSEFGRPPMPAHTARRPDAVAL" FT /colour=200 150 100 FT gene complement(5185621..5186094) FT /gene="shcS2" FT /locus_tag="PSPTO_4589" FT /old_locus_tag="PSPTO4589" FT /colour=200 150 100 FT promoter complement(5186123..5186154) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS complement(5186263..5186646) FT /gene="hopT2" FT /locus_tag="PSPTO4590" FT /note="previously known as HolPtoU3 and HolPtoU-related FT (PMID 12615215; Greenberg and Vinatzer, 2003); similar to FT GP:19071526, and GP:19071526; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopT2" FT /protein_id="AAO58036.1" FT /db_xref="GI:28854974" FT /translation="MFCRRSCMNGCRITPARVGSPKTEASGLQLNSRIEKVVVEHISG FT HPAAKITMQSLVGTLAHTFVMAHGEIKGWAEIVQSPSRPHESNRKGSGVFSACVDLMA FT CVGWNAALTRATADPATTTANKASW" FT /colour=255 0 0 FT gene complement(5186263..5186646) FT /gene="hopT2" FT /locus_tag="PSPTO4590" FT /colour=255 0 0 FT misc_feature complement(5186668..5186958) FT /note="PSPTO4591; this region contains an authentic point FT mutation causing a premature stop and is not the result of FT a sequencing artifact; identified by similarity to the FT C-terminal regions of HopO1-1 and HopO1-2; identified by FT Glimmer2; putative" FT /color=255 0 0 FT misc_feature complement(5186668..5186958) FT /note="PSPTO4591; this region contains an authentic point FT mutation causing a premature stop and is not the result of FT a sequencing artifact; identified by similarity to the FT C-terminal regions of HopO1-1 and HopO1-2; identified by FT Glimmer2; putative" FT /color=255 0 0 FT CDS complement(5187067..5187573) FT /gene="hopO1-3" FT /locus_tag="PSPTO4592" FT /note="This region contains an authentic point mutation FT causing a premature stop and is not the result of a FT sequencing artifact; identified by similarity to the FT N-terminal regions of HopO1-1 and HopO1-2; similar to FT GP:19071518, and GP:19071518; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopO1-3" FT /protein_id="AAO58038.1" FT /db_xref="GI:28854976" FT /translation="MNINPSLGAHGSAYSSPQSDTSKATGKAPAPSFFKQLGGCFSPC FT LGSHASSSQQLSASHAQTLSQNYSSNIQGTSRTRQPRAPSPRLSDTPMKQALSSMIER FT ERLRLQGLSGGMFSGIDSADAMIGRALTKKDSNPKAARFSDDEFLAVHLYTTCLYRPI FT NHHLRYQH" FT /colour=255 0 0 FT gene complement(5187067..5187573) FT /gene="hopO1-3" FT /locus_tag="PSPTO4592" FT /colour=255 0 0 FT CDS complement(5187920..5189089) FT /gene="hopT1-2" FT /locus_tag="PSPTO4593" FT /note="Previously known as HolPtoU2 (PMID 11872842; FT Guttman et al, 2002); similar to GP:19071528; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopT1-2" FT /protein_id="AAO58039.1" FT /db_xref="GI:28854977" FT /translation="MIKTVSDNSIPGTYGIAFTRVDTAAQISRPVPSDIQRNSSIEKA FT VIEHIADHPAAKVVMSALVEALTGVFVKAQGEIKGWAEIVQAASRPHDSNRKGTGVLS FT PRFDVMGCVGWNAATIRATCRVGTLREKGTLFTNLMLSDNFKRILERSMTDPALQRKL FT EGLVDLDYLKTTDGNLYAMSGWAARASESREQIGKAAFESASNLGSAQISARELAFHR FT HNPVNHPSNQARVGFGISSPANNDLQVLRGHGSSVWKVKPGSDFARLASASGKPVIAG FT PSGTASRFMAVARFISPGCLRDLGLDSEQAFKELVRYACYGYFGQDDHHSMLEVNLGI FT APHGLDEQWDDKLYTEPFSHVIMGRGFSVDNAAQQHIVARATDEPVEHSAADRVG" FT /colour=255 0 0 FT gene complement(5187920..5189089) FT /gene="hopT1-2" FT /locus_tag="PSPTO4593" FT /colour=255 0 0 FT CDS complement(5189095..5189991) FT /gene="hopO1-2" FT /locus_tag="PSPTO4594" FT /note="Previously known as HopPtoO2 (PMID 11872842; FT Guttman et al, 2002) and HopPtoS3 (PMID 12032338; FT Petnicki-Ocwieja et al, 2002); identified by match to PFAM FT protein family HMM PF03496" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopO1-2" FT /protein_id="AAO58040.1" FT /db_xref="GI:28854978" FT /translation="MNISPVSGAHGSSYPSAQSTASTASKGPSGSFLKQLGGCFSPCL FT GSSSTGAILSPAHEQVLSHTYSSNIKGKLRTTPPKGPSPRLSDTPMKQALSSMIVQER FT KRLKSQPKSLASDIERPDSMIKKALDEKDGHPFGERFSDDEFLAIHLYTSCLYRPINH FT HLRYAPNNDVAPVVEALKSGLAKLAQDPDYQVSSQLHRGIKQKMSDGEVMSRFKPGKT FT YRDEAFMSTSTHMQVSEEFTSDVTLHLRSSSAVNIGPFSKNPYEDEALISPLTPFKVT FT GLRKQDDKWHVDLNEIADNSDE" FT /colour=255 0 0 FT gene complement(5189095..5189991) FT /gene="hopO1-2" FT /locus_tag="PSPTO4594" FT /colour=255 0 0 FT CDS complement(5190048..5190437) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_4595" FT /old_locus_tag="PSPTO4595" FT /product="hypothetical protein" FT /note="identified by Glimmer2; putative" FT /db_xref="UniProtKB/TrEMBL:Q87WF5" FT /protein_id="AAO58041.1" FT /translation="MNKGLKRLAEHPDNVVKETLYRGINKVVDDKFIHKNFKLGEVYRD FT KTFVSATPDLSTVNATFTRHTVKSSKARHQHLCINAVHYWRLRAVLQYASGKFRCRVLK FT RKGFLRLILPFWWRTRAGQTREGGI" FT gene complement(5190048..5190437) FT /locus_tag="PSPTO_4595" FT /old_locus_tag="PSPTO4595" FT CDS 5190629..5191606 FT /gene="PSPTO4596" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58042.1" FT /db_xref="GI:28854980" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 5190629..5191606 FT /gene="PSPTO4596" FT /colour=178 58 238 FT CDS complement(5191741..5192097) FT /gene="hopS1" FT /locus_tag="PSPTO4597" FT /note="Previously known as holPtoZ (PMID 11872842; Guttman FT et al, 2002), HopPtoS4 (PMID 14702323; Schechter, FT 2004)ORF26 (PMID 12032338; Petnicki-Ocwieja et al, 2002).; FT similar to GP:19071536; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopS1" FT /protein_id="AAO58043.1" FT /db_xref="GI:28854981" FT /translation="MKISGSTSPAHTSTNSAQKSSSKGLLSGLAKHFKGMLVSGNTSG FT HSALGHYASSSSGSKGKAPVRDDYSNGPQTRLNNTPLKRALARELDRFGYGSSATESF FT DRSLQRKDKNPELGKV" FT /colour=255 0 0 FT gene complement(5191741..5192097) FT /gene="hopS1" FT /locus_tag="PSPTO4597" FT /colour=255 0 0 FT CDS complement(5192110..5192583) FT /gene="shcS1" FT /locus_tag="PSPTO_4599" FT /note="identified by Glimmer2; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III chaperone ShcS1" FT /protein_id="AAO58045.1" FT /db_xref="GI:28854983" FT /translation="MNAFATGQLEYSLKKLGYDAAALQALREEGYLLWKGKNDQTSLL FT VPSADLDALFVINTLSYIDPEHDGRLLALALHLNLSPVHTMSACIALDVEQNTLCLRY FT THDLGGSGADTLLLALENAQALAEQVRQVIETFRRDQGRPSGQTSLSRQSSALMR" FT /colour=200 150 100 FT gene complement(5192110..5192583) FT /gene="shcS1" FT /locus_tag="PSPTO_4599" FT /old_locus_tag="PSPTO4599" FT /colour=200 150 100 FT promoter complement(5192613..5192644) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 5195601..5196866 FT /gene="PSPTO4603" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58049.1" FT /db_xref="GI:28854987" FT /translation="MDFQVIEQIVNGARRKLLVQDCIPVYYPNLYITMERSGRALETT FT KKYLEHLIVLEQFLSFSSIDLISRLEQRPHSQYLTDSELSRFVSDAGFRKETLAMKYA FT GMRLHPTAYKTVGKVHAQQRIEAVRDYVAFLYDKLGDHLTRYEAGDDLKKRINRKIKA FT ASPAWKNTRVDEMKGLTSQERTRLLKIMHPDSAENPFPDKAIRLRNYIILLLGLDMGL FT RRSEMLLIKTSDIHWHSRQLAVVNLEDESLDPRTMAPQFKTHERMLVMTDDLYDAITD FT YESNYRHRKPRIGTSQARKHPFLLVAHKRNEGGPLTIKAIDAVLSRVREIAPELAHVH FT PHILRHDAVYTMLESMCEELAALTPEDRTTQVQKTLTWMFGWSPGSDMPGRYGAKFWK FT EEADEAIQKRAERFKAIRQKAGTTLGGSE" FT /colour=178 58 238 FT MBL 5195601..5196866 FT /gene="PSPTO4603" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58049.1" FT /db_xref="GI:28854987" FT /translation="MDFQVIEQIVNGARRKLLVQDCIPVYYPNLYITMERSGRALETT FT KKYLEHLIVLEQFLSFSSIDLISRLEQRPHSQYLTDSELSRFVSDAGFRKETLAMKYA FT GMRLHPTAYKTVGKVHAQQRIEAVRDYVAFLYDKLGDHLTRYEAGDDLKKRINRKIKA FT ASPAWKNTRVDEMKGLTSQERTRLLKIMHPDSAENPFPDKAIRLRNYIILLLGLDMGL FT RRSEMLLIKTSDIHWHSRQLAVVNLEDESLDPRTMAPQFKTHERMLVMTDDLYDAITD FT YESNYRHRKPRIGTSQARKHPFLLVAHKRNEGGPLTIKAIDAVLSRVREIAPELAHVH FT PHILRHDAVYTMLESMCEELAALTPEDRTTQVQKTLTWMFGWSPGSDMPGRYGAKFWK FT EEADEAIQKRAERFKAIRQKAGTTLGGSE" FT CDS 5196863..5198458 FT /gene="PSPTO4604" FT /note="identified by match to TIGR protein family HMM FT TIGR01834" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58050.1" FT /db_xref="GI:28854988" FT /translation="MNIAVDALQAPTKTTLDAWLNTPRLAKCGKVFTPAEPMWKPDKS FT ANRSVNWEAAIGCVSPDWQPWLHATLAYRMADMAASTVAHAASGLSRAAQAGIDPLNE FT DHLIALRERLNEGEFSTIAALMAFWHDCESLEQRPSQPLIGAYQALPRKKRSRNDVIL FT SLDPEQGPFTQVEQDALHQWIHQQFCHAQLDPEQYLYLRLLMIYGQRGAQVRMMVFGD FT FTKSDQGCKVRFHRAKQKGDEAGWRAKSETFTLDEDFFNTVQAYKAMVLAQLWQAYPD FT GADWNVAIENVPLFRRKLEDKAEFWERLTPPVLLDSPHQKSLEDAPQPTFHVGPGTLR FT SWLARIERMEGFPISPRTHQPLKMTRGHRFRHTLGTDLSNAGLDEWTMARAFMHIDTQ FT TVRKYRQVSAELMALVDAKMSDHLALVVNAFTGIIVTDRASAKNGDRADRQIEDVAVC FT GATAACHLDAPFTCYACAKFQPLLYANHREVLERLERRRAQTIDTDKTTGVLWDRAIL FT ACRKVILDCEAMRRSSDSRRTEE" FT /colour=178 58 238 FT MBL 5196863..5198458 FT /gene="PSPTO4604" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to TIGR protein family HMM FT TIGR01834" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58050.1" FT /db_xref="GI:28854988" FT /translation="MNIAVDALQAPTKTTLDAWLNTPRLAKCGKVFTPAEPMWKPDKS FT ANRSVNWEAAIGCVSPDWQPWLHATLAYRMADMAASTVAHAASGLSRAAQAGIDPLNE FT DHLIALRERLNEGEFSTIAALMAFWHDCESLEQRPSQPLIGAYQALPRKKRSRNDVIL FT SLDPEQGPFTQVEQDALHQWIHQQFCHAQLDPEQYLYLRLLMIYGQRGAQVRMMVFGD FT FTKSDQGCKVRFHRAKQKGDEAGWRAKSETFTLDEDFFNTVQAYKAMVLAQLWQAYPD FT GADWNVAIENVPLFRRKLEDKAEFWERLTPPVLLDSPHQKSLEDAPQPTFHVGPGTLR FT SWLARIERMEGFPISPRTHQPLKMTRGHRFRHTLGTDLSNAGLDEWTMARAFMHIDTQ FT TVRKYRQVSAELMALVDAKMSDHLALVVNAFTGIIVTDRASAKNGDRADRQIEDVAVC FT GATAACHLDAPFTCYACAKFQPLLYANHREVLERLERRRAQTIDTDKTTGVLWDRAIL FT ACRKVILDCEAMRRSSDSRRTEE" FT CDS 5204349..5205311 FT /gene="PSPTO4608" FT /note="similar to SP:P20628, and PID:142038; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58054.1" FT /db_xref="GI:28854992" FT /translation="MQELTKNHTNDQRRLTAVEFQTLAKVPAAVEWFANLDNPRTRRA FT YQNDLEDFCSFIGLASADEFRVVTRSHVLAWRAHLEHRGLAGATIRRKLAALASLFDH FT LLENNAIAGGNPVHGVKRPRIESNEGKTPALGDHQAKALLEAPDETTLKGQRDRALLA FT VLLYHGLRREEAALLQVSDIQERRGIQHLKVHGKGGKVRYLPLHPIAAGRIHQYLENS FT EHHLAERKVPLFMPLRGKLTGAGITANGIYAVVTAYAKKAGIEVDGLGVHGLRATAAT FT NALEHEADIAKVQAWLGHANISTTKIYDRRENRPEDSPTYKVKY" FT /colour=178 58 238 FT MBL 5204349..5205311 FT /gene="PSPTO4608" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to SP:P20628, and PID:142038; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58054.1" FT /db_xref="GI:28854992" FT /translation="MQELTKNHTNDQRRLTAVEFQTLAKVPAAVEWFANLDNPRTRRA FT YQNDLEDFCSFIGLASADEFRVVTRSHVLAWRAHLEHRGLAGATIRRKLAALASLFDH FT LLENNAIAGGNPVHGVKRPRIESNEGKTPALGDHQAKALLEAPDETTLKGQRDRALLA FT VLLYHGLRREEAALLQVSDIQERRGIQHLKVHGKGGKVRYLPLHPIAAGRIHQYLENS FT EHHLAERKVPLFMPLRGKLTGAGITANGIYAVVTAYAKKAGIEVDGLGVHGLRATAAT FT NALEHEADIAKVQAWLGHANISTTKIYDRRENRPEDSPTYKVKY" FT CDS 5220631..5221653 FT /gene="PSPTO4625" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58071.1" FT /db_xref="GI:28855009" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 5220631..5221653 FT /gene="PSPTO4625" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58071.1" FT /db_xref="GI:28855009" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 5221650..5222459 FT /gene="PSPTO4626" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58072.1" FT /db_xref="GI:28855010" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 5221650..5222459 FT /gene="PSPTO4626" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58072.1" FT /db_xref="GI:28855010" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(5246633..5247610) FT /gene="PSPTO4643" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58089.1" FT /db_xref="GI:28855027" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(5246633..5247610) FT /gene="PSPTO4643" FT /colour=178 58 238 FT VR_#107 5272223..5433007 FT /colour=255 255 0 FT CDS 5282597..5284126 FT /gene="cfl" FT /note="Probably ligates succinate semialdehyde to the acyl FT carrier protein Cfa1.; similar to GP:13959822; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid synthetase, ligase component" FT /protein_id="NP_794429.1" FT /db_xref="GI:28871810" FT /translation="MSLISEFRSVVAQQPDTTAVVEDQRAVSFTELAQLADKVSAGLL FT QAGLQPGDRVAIHLGNRLELVALYYACLEIGAVTVPINRRLVTGEIEHLLHHSGARYY FT IGDQETYSRYAAVIAGSATVERAWIVAGEEALKEEQYLPWSDLLVSSPSKRPPSHADS FT LAAIFYTSGTTGLTKGIVHSQATLAQAVDLMKAMMPPRTAQGALDTGAVHSMMDAIVP FT WSILMILAAHRLGRAVVLLPVLTAETTLALLQRLPLSFLKGAPSHFNNLLAAGEASAA FT TPLPSLTSTYSVSGGDPCPPKLGRRWHNLWGGTLRGSYGTTESGPIFCQPDVAATEQS FT SIGWPLPGVALQQTENGELLIRSPANTPGLWNGQDADRLPAARWIATGDLVQRQDDGG FT YLIIGREKDMLKCDAYSISPVEVEQELLKLPDIAEAVVFGVPDATIGERPVALLRTTS FT GRELPTQQLKQHLKALIAEYKHPRQYLFVERIPLSSAGKVSRKQLASDYREILGAAPS FT T" FT /colour=0 0 255 FT diffusible 5282597..5284126 FT /gene="cfl" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4680" FT CDS 5284213..5284464 FT /gene="cfa1" FT /note="Proposed to be loaded with succinate semialdehyde FT as the starter unit for coronafacic acid biosynthesis. The FT ligase responsible for loading this ACP is probably the FT cfl gene immediately upstream. The succinate semialdehyde FT unit is proposed to be extended by one acetate unit, FT cyclized and dehydrated to yield CPC (cyclopentenone FT carboxylate) which is subsequently transferred to the FT polyketide synthetase, Cfa6.; similar to PIR:JC5745, FT SP:Q00767, GB:M76657, and PID:153292; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid synthetase, acyl carrier FT protein component" FT /protein_id="NP_794430.1" FT /db_xref="GI:28871811" FT /translation="MNEIEKTIVDILVDDLFISTPRADIDLNANLRNALGLDSLGFSE FT LRAQCEYAFGVKIEDEDFNPKHFDSVHTLAQLLTALQAK" FT /colour=0 0 255 FT diffusible 5284213..5284464 FT /gene="cfa1" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4681" FT CDS 5284476..5284973 FT /gene="cfa2" FT /note="Probably involved in the final step of the FT biosynthesis of CPC (cyclopentenone carboxylate) on the FT acyl carrier protein Cfa1. Catalyzes the dehydration of FT the initial cyclization product.; similar to SP:P72238; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid synthetase, dehydratase FT component" FT /protein_id="NP_794431.1" FT /db_xref="GI:28871812" FT /translation="MSLPESDKQPRAQRTMGFTELKTWLRHRHPMVYLDRVLDYEPGV FT QIKTLMAVSGQTDALAGHFPERAIYPASHLMQAISQSAIILFQLSTSRLAGDEMTLVG FT SIKSRFTRPVVPGDLVIFQLDCESLRPDFFTFSCRATVDGRSVGMLKGSLVRKSLADL FT GEHLW" FT /colour=0 0 255 FT diffusible 5284476..5284973 FT /gene="cfa2" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4682" FT CDS 5284967..5286112 FT /gene="cfa3" FT /note="Possibly involved in the biosynthesis of CPC FT (cyclopentenone carboxylate), an intermediate in the FT biosynthesis of coronafacic acid, from acetyl CoA and FT succinyl semialdehyde.; similar to PIR:JC5747, and FT GP:1655813; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid beta-ketoacyl synthetase FT component" FT /protein_id="NP_794432.1" FT /db_xref="GI:28871813" FT /translation="MVSRPVEVWVTGMAWSTALGDDLEVVWQSLLAGRSGIRSVDFPV FT ALRSPLASPLPDLDPALPLPERQHRLTVATLRRALQDAGLAKATEEVVPVLATSYGHH FT LDVPETESLSRWAVEAAREAGCQHAPITVSTACSAGADALLLGLSLIRRGFTDTCLCG FT GADILTPAKRLGHSQLGTLSADGLRAFDRAHSGTVLGEGAGFLVLETRAAALARGARP FT YGILAGAGSANDAVSAVAPDLSGDCLALAVRRALCDAGLTAHEVGCISTHGTGTRLND FT EVETKTYSDLFASSPRLPLLFGTKGAFGHTLGATGALEAISLLLALGNQQVPPIVGLE FT NPLTGIALPLAMRTALACPAEVGISVTLGFGGFDTCLVFQRAREAMR" FT /colour=0 0 255 FT diffusible 5284967..5286112 FT /gene="cfa3" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4683" FT CDS 5286109..5286642 FT /gene="cfa4" FT /note="Possibly involved in the cyclization of CPC FT (cyclopentenone carboxylic acid) on the acyl carrier FT protein, Cfa1. This intermediate is then passed to the FT polyketide synthetase, Cfa6.; similar to PIR:JC5748; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid synthetase component" FT /protein_id="NP_794433.1" FT /db_xref="GI:28871814" FT /translation="MTDLDWSVYHLNALGQAESVAALGSEGGAAQKASAYADPLSWLV FT FEAVDYVLDNCRDAVLAAGQTVGHIVVSDVCTLHTMQHIARDLGRNRLSPLRFSGACP FT GLVCSLPGQLLRFSGPSLVLSMPPQGGLRPAALLARDWLDSGAASYVLVSAHDTDGAQ FT HRVRCTLLQLQTEQVSP" FT /colour=0 0 255 FT diffusible 5286109..5286642 FT /gene="cfa4" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4684" FT CDS 5286639..5288057 FT /gene="cfa5" FT /note="Possibly the ligase which activates coronafacic FT acid and transfers it to CoA or an acyl carrier protein.; FT similar to GP:7649554, and PIR:PC4426; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid synthetase, ligase component" FT /protein_id="NP_794434.1" FT /db_xref="GI:28871815" FT /translation="MNVVVDTQGVQALFERVLPMEAGSGREPFEGFATLCEGLQRLGV FT KPGRAVLVALPNGTHFVALLFALLLLGAVPTPLPYAAPPGRIRRFAKLLGADLLILPC FT GAAIKALDAREAGRLSSELQWARLKDIVTLPYEPGEVVLLTSGTSGIFSGCVFDSAAL FT LLNARRHAASIGQSAADRLLINLPLFYSFAFVAQLLSSYVLGNEVVLATPPFTPIHYH FT RTLLDLGITLSSLTPVMVTALCAADLDGLPPSLRRLTIGGDALAANLVPRLLARNPDL FT ELYLTYGLTQAGPRVATLAAHLEPAERHASVGRPLPEVEVELGGAPGASEGELLVVTD FT TAMQRRIRAGETDRLPPLRGQKRLVATGDHFHIDADGYLFFRQRNPTFVMRRGEKLCP FT RSICEIVESLPGIVSAEAWVRPNAGPNDEVALILDVQSQDPDLNEQALRQQLAGILLR FT AEQPDRLDVTFAQHAIWQKGRR" FT /colour=0 0 255 FT diffusible 5286639..5288057 FT /gene="cfa5" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4685" FT CDS 5287945..5296104 FT /gene="cfa6" FT /note="This gene is the first of two multimodular FT polyketide synthetases involved in the biosynthesis of FT coronafacic acid. This synthetase is proposed to receive FT CPC (2-carboxy-2-cyclopentenone) from an acyl carrier FT protein (cfa1), it then adds a buyrate group and then FT completely reduces the ketone of the (former) carboxylate FT group. The resulting product is then passed to the second FT polyketide synthetase (cfa7).; similar to GP:13346874; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid polyketide synthase I" FT /protein_id="NP_794435.1" FT /db_xref="GI:28871816" FT /translation="MNKRYGNNLPGSCCALSNRIDWTSPSRSTPSGKKAAVNRFQYFC FT RSLPVTTFTVPLILSDASPTALAATAQRLRAEHETRSFAEWQVFCRQQLTRDHAEYRA FT AILATDQASLLKGLDMLARGRASRHLVLGRADQLRQPVLVFPGQGPLWPRMTTGLSAT FT LPSYQQALHRHGDVIEARIGWNPARALAEGEGIERLLRIQPLQFALACSLAETWRAFG FT IEPAAVIGHSVGEAAAAHVGGYLDEASGAALTVLWGETLTAIEGQGGMLSVAAALDDI FT KPLLDDQESLSVAAINAPRSVTLSGTLMALDALQARLTDAGFWAWRVPGGQVAGHGPQ FT VEQLRDAVTSRAPAKVMDGQVPYYSSVSGGRQNGEHLDADYWFRVLRETVRFQDSLQA FT LIADGHRLFIEVSPHPVLTSLIDEALRGAGVVDGAVATLDQRKDDRESLLQAMAHAFV FT HGAPVDWSQVIERLLPEGSMSAQLAPTAATAGDDTLAAANLAQLGEPEQCRLLLKLLA FT QEMETLIGQPFASETQAFRDCGFTSLHVVEFAQAVSAAVGVSLPVTLVYDHPTPRAVV FT TYLRGVLGLQSPSQRQAAPIVTGAHHDEPIAIIGMSCRYPGGANSPEALWTLLMQERD FT AISEYPTDRGWDTTKLYDSEPGRFGKISTRTSGFLHDASAFDPAFFGISPREALTLEP FT QQRLLLEVSWEALERAGIDPASLHGSLTGVYAGIMGTEYGTQIQHASEDVTGYGYMGT FT ATCVAAGRVSYCLGLQGPALAIDTACSSSLVAIHTACEALRSNDCQLALAGGVTVMPT FT PGVLIDFSQQRVLAPDGRCKAFSASADGVGLGEGVGMLVLERLSQAQAKGRLILGVIR FT GSAVNQDGASNGLTAPNGTAQQQVIRHALANAGLQPEDVDAVDAHGTGTRLGDPIEAN FT ALLATYGQRPAERPLLLGSIKSNTGHTQAAAGVASLMKMVMALRTGTLPRSLHITAPS FT TEVDWSTGAIELLSERRPWPTVADRPRRAGISSFGVSGTNAHLIVEEYVAPAATSACQ FT VPETQAPLWPLAAKSTEALRDVAARLHGHVLEQAHLAPDDIGYTLGISRSGFPFRAAL FT RGTSREALLEALHALASGTDHPCLLQGTAQVRARKRVFIFPGQGSQWAGMGMELYAAF FT AVYRQTIDQIETALQPYVDWSLVAVLRGEEGAPSLERIDVVQPALFAVMVAIARLWQS FT LGCTPDAVIGHSQGEIAAAYIAGALKLEDAVKILAIRSQLMLAQAGTGAMATVVLPEQ FT QAAELAARVDASLTLAVFNSPSSTVISGATNAIARLLETCKRERIVARRVAVDVAGHS FT PQIEVLRPQLLARFADLRPQATQIPFYSTVAGHNPAVSLDGRQLGAGYWCDNLCLPVR FT FADTVQALSSAGDVTFIECSPHPVLLPPLEETIGDQTSSLGSLQRNKPAVDCLVAGLS FT QLYLEGHPLSWRALYPQGRIVELPTYPFDHKPFWLTGQGPTDVTGAGQRATQHPLLSA FT AVDLPEGGMLLTGTLGLGAHPWLADHAAAGVVLLPGTAYLDMLLFAAAQTDCTQLLEL FT TLQAPLVLEQQGQIDLLLTVSRAEAEGLRQASLHARRHGDATAGWTLHASAQLVPMPP FT QTLIPLDQAWPPTAAIPLDSAALYQRLSEAGYEYGLAFRGLTAAWQDGERTYVEVTLP FT ETLPSGTHVLHPALLDAALHPLALADEEAAAPLRLPFAFSGVSVTAERPRQLRAVLQR FT TQAETYSVSAYDETGNALLHIAALQLRPASRDTLRDLARVQPAHDLLRLTWSQLSARP FT RVQRAVTRWVRIGTAEPGLSSAPTYPSLTALGQALESSTTPADVLVWPLPEVQGANSA FT LATRQLCVEVIAQLQVWLAEERLADTRLLVVTRKANATVAGEAVDPAHAALWGLLHSA FT QNENPGRLLLLDTEGPLADPAPLQAVLASDQRQLALRRGQLLVPHLTRSGPNSVLTPP FT LGGGAWRLEITRAGNLDDLALQPEPQADAPLENGQIRLAVRAAGVNFYDVVCALGLIP FT PQHKLGTEAAGIVTEVGTGVTDLRPGDRVLVMSEGAFGPLLVADQRTARKLPADWTFA FT QAAGFPVAFLTAYYSLVRLAQVRPGDKVLIHAAAGGVGQAAIQLAKHLGAEVFATAHP FT DKWPILKALGIAQDHIATSRDLSFAGRFGALLGEAGMDVVLNSLAGEAIGVSLALLGR FT GGRFIELGKTEVREPAAVALQYPGRHYHYLDRPDQDPQDTGRMLDELLGLMCDRILTP FT LPVTAFDLRDAVQALRWMQQGRHTGKVVLTLPRTLDPDGTVLITGGTGTLGSLAARHL FT VVTGQARHLVLASRSGPQADGALALRQELEAAGAQVRLAACDLADPESVERLLNSLPA FT KHPLTAIIHTAGILADATLPNLGPEELERVFVPKADAAWMLHERTRQLDLAAFVLYSS FT SAGTLGSPGQANYAAANRFLDALAQTRQRQGLPATSLAWGWWQPVTGLSSRLTAADNA FT RIARTGFAPITPEHGHALLDTAIAAPQAFFVAAPLNPQTLRKNAQAGTLHPLFERLGG FT GSPGARGSEGPAKVQDLRQLLAGLDPQARTKQLQTVIATQVAAILGLDDPGQVLPEAT FT FKESGIDSLMALELRNRLATAAGLRLAATLTYDQPTPAALAAYLNDALFPDGGAPDAD FT TAAIDEPKVRALLASLSLSALREADLLAPLLQLAQHPFVKAPPLAADLATASADELVA FT LALRTQE" FT /colour=0 0 255 FT diffusible 5287945..5296104 FT /gene="cfa6" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4686" FT CDS 5296110..5302310 FT /gene="cfa7" FT /note="This gene is the second of two multimodular FT polyketide synthetases involved in the biosynthesis of FT coronafacic acid. This synthetase is proposed to receive FT CPE (2-[1-oxo-2-cyclopenten-2-ylmethyl]butanoic acid) from FT the first synthetase, Cpe6. It then adds one final FT acetate group, catalyzes the cyclization of the second FT ring and converts a ketone to a double bond. The product FT is released by a terminal thioesterase domain.; similar to FT GP:13162634; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid polyketide synthetase II" FT /protein_id="NP_794436.1" FT /db_xref="GI:28871817" FT /translation="MTETKNTDSERLTEALRASLMANETLKRQNHELQAAAQEPIAIV FT AMGCRLPGGLASPEALWRLVEAGEALSNALPSDRGWQLDSLFPADSPLRERVAGWRGG FT FLDKVAGFDAAFFRISDREALAMDPQQRLLLEVCWEVLERAGIVPDTLKNSATGVFLG FT ATQNGYLADLQRRNPAADGYRLQGGLSSIISGRIAFVLGLRGPAVTVDTACSASLTAI FT HLAVQSLRSHECSLALAGGVTVMATPEVFAEFTRQNGLAADGYCKAFAEQADGTCFAE FT GAGVLLLERLADAQRAGHPVLAVIRGTAINQDGASNGLTAPSGSAQEQVIQLALQNAR FT LRSLDIDVVEAHGTGTALGDPIEAGALINTYGRGRPPERPLWLGSLKSNIGHTQLAAG FT VASVIKMVMALNQSVLPKTLHAQEPSRKIDWSEQTVRLLDRARPWPETDRPRRAGVSS FT FGFSGTNAHLILEQAPPATQVACHPTVAELEGLPAISFPLSAACAKGLRAQARQTIAL FT LENPTTDLAALNASLALQRSAFDHRAVILATQREDALMQLRALAEGRHAPGLIQGKRS FT PSGTTAFLFSGQGAQWPSMGRNLYRLCPPFAAALDEVCAALDPLLAQPLKNVMFADKG FT SDRAALLDRTDFTQPALFAFEVSLYRMLRHFGIVPDVLLGHSIGEIAAAHVAGVFALA FT DAAHFVAVRGRLMQAITHEGAMVAIEASEQDVRATLAGLEQSVAIAAVNAPTAVVISG FT DRSAVERLAADWQQRGHRTQMLRVSHAFHSPHLDGILAELRQTLAGLSFHAPTLPIVS FT TVTGMPLTAEQARSPDYWADQARQPVRFAAALCWLLEHRLTTAVEIGPDAVLTALGRT FT NASHHPNGDTAAQWIAPQRRDKDDSRPLFAALAQLYTRGAALDWRRLLPPAPTLALPT FT YPFQHRHYWLQPRSCANGHAGNMPGLLALEHPLLAHGLERADGQGWVFWGQLDGSRQP FT WLLEHRVGGQAYGAGAMTAECILTIGNRLGCPWLQDLTLQRLVPLPEQGAVDIQIYLD FT VPDAQGVRNVAAYYRPAEPDATGGWQHFASCQLLPDPTEPPLWPDLQTAVWPPAHAEP FT TAFADLYARLAEQGVVLEGSFRRIVRAWQSPEGIYVEAERAHSEPGSTFTLHPTLLDA FT GLQSGLLVEGAASSAAAPRLLFSMSGMRLYQAGATQLRGLLQLKARPTSPTAPRDYRM FT RLADYQGRAVVTLDSMVLKSASTGVLPRRLVGYRVLWREVSPDHVADPHEALWLGAKD FT DLPSDCVSAAYQHLADAITTLATTPPGTALVLVPPVPPATPAAANRALQDLAATLREW FT LEDERTARHPLLVATRRAVATADDEDVPNLSQAALWGLVRTAQEEHPGRILLLDLDTA FT HATPRDFARALAAAKGDEPQLAWRQGRLLTPRLVRSSGVEPATEQRSDVSLDPEGTVL FT ITGGTGTLGRALARHLVAKHGVRHLLLVSRSGAAAPEATALVEELAEQGTATTVAACD FT VADPQALAQLLDGLPARHPLTAVFHVAGVIEPAPLLQLTPAQLEAVVRPKLDAAWQLH FT LQTRHRNLAAFVLYSSAAGLLPQPGQSHYAAANTFLDALAHHRRHLGLPAVALAWGLW FT AERSAMGERMAAAGIQELLDRGQLPIALEDGLSQVDLALTGSLPPLAIPARLDLPALR FT RHGPLALLRELLAEGSGQTASQGPEALAKLAPTERRTRLLAVIAQGVGEVLEHPDPAA FT IPGDTEFLVLGFDSLTAVELGSWLAATTGIRLPSTAVFDHPTPSALADHLSACLDQPE FT RAPAPTIATVGMLFEELREAMRQGRLAQGLERLAQFAAKRPTFAPDAAEGHAPAPSWS FT RQERDRPLLICLNSFLPARANLTYQRLGRELKGHYDMATLPLPGYDNGPLPASAEAVA FT VALAHAVEACAAGRPFTLLGFSTGGLVAYAVAELLQQRGIHPAALCLIDTYPPAAMRS FT AVLKEVLSDWLESRSDFWSTDDDGLSAMAYYLELFGRWSPLPLEAPVLLLQAEQASAA FT GASDTWPQLWPRLTQVVKTSGRHFALLSDEVQQTAQHLILVLADYSGAAS" FT /colour=0 0 255 FT diffusible 5296110..5302310 FT /gene="cfa7" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4687" FT CDS 5302800..5304005 FT /gene="cfa8" FT /note="The product of this reaction is butyryl-CoA which FT is required for the biosynthesis of coronafacic acid. In FT other organisms this activity is part of various pathways FT and is known as ccr, or ccrA.; similar to GP:4731329, and FT GP:15823984; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="crotonyl-CoA reductase" FT /protein_id="NP_794438.1" FT /db_xref="GI:28871819" FT /translation="MNQALTETMQAFLIRPERYGEPQQAIQLEQVQIPTLGPHQVLIE FT VMAAGLNYNNVWAAQGKPVDIIAARRKRNRDAEPFHIGGSEASGYVKAVGDAVTHVKV FT GDTVVVSCSVYDATAIESRVAPDPMFCSNQEIYGYETSYGSFAEYTLVEDYQCFPKPK FT FLSWEESATLMLNGPTAYKQLTHWAPNTVKPGDAVLIWGAAGGLGSMSIQLTRALGGL FT PVAVVSSPDRGRYACELGAVGYLLRTDYPHLGRLPDLNSDAHSAWTKSFASFRRDFFM FT TLGKKELPKVVIEHSGQATFPTSLQICDRSGMVVIVGGTSGYNCDFDVRHLWMHQKRI FT QGSHYANIRECQEFLQLVEQRRVVPTLNTLYRFEETPRAHQALLSGEVVGNAAVLVKA FT ERPGLGVGC" FT /colour=0 0 255 FT diffusible 5302800..5304005 FT /gene="cfa8" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4689" FT CDS 5304061..5304804 FT /gene="cfa9" FT /note="This thioesterase is likely responsible for the FT release of the coronatine intermediate, CPE (coronatine FT cyclopentenone) the proposed product of Cfa6. Its FT biological role may be as an editing function to release FT abnormal substrates from Cfa6. See Jiralerspong, S. et. FT al. (2001), Gene 270:191.; similar to GP:4582977, and FT GP:3114702; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="CFA synthetase, thioesterase component" FT /protein_id="NP_794439.1" FT /db_xref="GI:28871820" FT /translation="MSSTNDHPWLVRASREQRPRTLYAFPYAGGDAQAYLGWASRLDA FT SIEWITLELPGRGSCPATSYADVQEFVQALVPLFADCQKPFAFFGHSFGALLSFLICR FT ALAERQLPLPRGLILSGCKAPAYFEPVAQPALSDDDTIALIRAYGGTPEVVLSNRALM FT SFFLPTIKADLTLVRSYRWQPQPRLPIPLLILSGRQDSTHGPDVAQGWRDVTSGETTF FT QAFDGGHFFIKDHHYDVLQIMNQFLLKSL" FT /colour=0 0 255 FT diffusible 5304061..5304804 FT /gene="cfa9" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4690" FT promoter 5305220..5305252 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT CDS 5305803..5307701 FT /gene="hopAD1" FT /locus_tag="PSPTO4691" FT /note="Previously known as HolPtoS (PMID 11872842; Guttman FT et al, 2002) and HopPtoI (PMID 12032338; Petnicki-Ocwieja FT et al, 2002); identified by match to PFAM protein family FT HMM PF02918" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAD1" FT /protein_id="AAO58135.1" FT /db_xref="GI:28855073" FT /translation="MLIGHSLHHMRPTAVDSSLPTSATSQTISNTKSRLDPHRVRELT FT FIGVGSSVAYLLNELNGRFADSGVTTPFLGKVSIVGKDDSWAENVRGKGYINHQTEII FT SQWDQQVPKYDPNYAARAEFSASNRRQLTRTVELGAEHLKAQVTGISRLDDGCFRINL FT DNGQILQSRQIVLGTGAGPHTSIWNSVTSHTQAEKRLDNIKLHEQKALRGKVLDLDEF FT MRASDASPQTFAGKTVVIHGPNAGIDAAERAGELGANAVWFTRSTNPVLLDGNQLKFA FT PELAKSAIHKVDKLDIRPTKLENGFALRLHYSSLGQDSREPKKVLDADYYVYAMGQDI FT HKPGSAAAILGSLLDHLEPIYDYDQVYSDQPFKTVIGLQSRGSNSDNGLIIVGAAVAQ FT LATNVQHSYKDHALDRILEEMTRLPEKQTEKLSQMLLEGAPSVQIQTYLKTWQLDSGQ FT PPDKQVLQNQVENYLAARDYFQRQTNEQKGNLDGVAAEVKNQTLTEVASVIVSPQLGT FT IKASAAALSGLMPAYVANGENNFTTDNRTMLRAGIAARYPNIGNAEASAFIDEVVTLR FT HLNSQRFIEKVAGEMMDKGAQPLVSLRPPVLGVPASVRTAYEAYLHALNSGAHDGTPL FT SQRWLPKK" FT /colour=255 0 0 FT gene 5305803..5307701 FT /gene="hopAD1" FT /locus_tag="PSPTO4691" FT /colour=255 0 0 FT CDS complement(5308353..5309906) FT /gene="PSPTO4693" FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58136.1" FT /db_xref="GI:28855074" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(5308353..5309906) FT /gene="PSPTO4693" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58136.1" FT /db_xref="GI:28855074" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(5309924..5310283) FT /gene="PSPTO4694" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58137.1" FT /db_xref="GI:28855075" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(5309924..5310283) FT /gene="PSPTO4694" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58137.1" FT /db_xref="GI:28855075" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 5310495..5310746 FT /gene="PSPTO4695" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy13, transposase OrfA" FT /protein_id="AAO58138.1" FT /db_xref="GI:28855077" FT /translation="MLDQGYSHIEAARSLGVVESALRRWVSQLQQERNGVTPQSKALT FT PEQQKIQEQEARIARLEREKSILKMANALLMSEEHERMR" FT /colour=178 58 238 FT MBL 5310495..5310746 FT /gene="PSPTO4695" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy13, transposase OrfA" FT /protein_id="AAO58138.1" FT /db_xref="GI:28855077" FT /translation="MLDQGYSHIEAARSLGVVESALRRWVSQLQQERNGVTPQSKALT FT PEQQKIQEQEARIARLEREKSILKMANALLMSEEHERMR" FT CDS 5310778..5312067 FT /gene="PSPTO4696" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy13, transposase OrfB" FT /protein_id="AAO58139.1" FT /db_xref="GI:28855078" FT /translation="MPCEVFEIPRSCYYDHCLRRRSTNSELVRLRGRFNELFTQSRSA FT AGSRSIVSLMQEDSEQIGRFKVRGLMRELGLISKQPGSHDYKKATVERPDIPNILNRE FT FDVTAPNQVWCGDITYIWAQGKWHYLAVVMDLYARRVLGWAFSKKSDTDLVIKALDMA FT YEQRGKPQGLLFHSDQGAQYGSRQFRKRLWRYRVRQSMSRRGNCYDNSPMARVFRSLK FT TEWIPAVGYMTAQEAQGDISHYLMHRYNRVRPHQFNDGLAPAQYEKTLTSCSGSVDHY FT IRLNQQGLIDLNTWMIDSTAVRATRASSGAGKRGPEEPLDHALGRSRGGLTTRIHMVY FT DANGVPLRFMFSPGQASDIAHAQSLLDLVRVPGKPGRPRKRSRWLLADKGYGAEHLRY FT YCDRYRMQPVIPPRAMPRKPGLACPDSLIVQSIGSAT" FT /colour=178 58 238 FT CDS 5310778..5312067 FT /old_locus_tag="PSPTO4696" FT /codon_start=1 FT /locus_tag="PSPTO4696" FT /orf_name="PSPTO_4696" FT /product="ISPsy13, transposase OrfB" FT /function="DNA binding" FT /function="transposase activity" FT /biological_process="DNA transposition" FT /protein_id="AAO58139.1" FT /db_xref="GO:0003677" FT /db_xref="GO:0004803" FT /db_xref="GO:0006313" FT /db_xref="HOGENOM:HBG304374" FT /db_xref="InterPro:IPR001584" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR012337" FT /db_xref="TIGR:PSPTO4696" FT /db_xref="UniParc:UPI00000093EF" FT /db_xref="UniProtKB/TrEMBL:Q87W63" FT /transl_table=11 FT /translation="MPCEVFEIPRSCYYDHCLRRRSTNSELVRLRGRFNELFTQSRSAA FT GSRSIVSLMQEDSEQIGRFKVRGLMRELGLISKQPGSHDYKKATVERPDIPNILNREFD FT VTAPNQVWCGDITYIWAQGKWHYLAVVMDLYARRVLGWAFSKKSDTDLVIKALDMAYEQ FT RGKPQGLLFHSDQGAQYGSRQFRKRLWRYRVRQSMSRRGNCYDNSPMARVFRSLKTEWI FT PAVGYMTAQEAQGDISHYLMHRYNRVRPHQFNDGLAPAQYEKTLTSCSGSVDHYIRLNQ FT QGLIDLNTWMIDSTAVRATRASSGAGKRGPEEPLDHALGRSRGGLTTRIHMVYDANGVP FT LRFMFSPGQASDIAHAQSLLDLVRVPGKPGRPRKRSRWLLADKGYGAEHLRYYCDRYRM FT QPVIPPRAMPRKPGLACPDSLIVQSIGSAT" FT /color=178 58 238 FT MBL 5310778..5312067 FT /gene="PSPTO4696" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy13, transposase OrfB" FT /protein_id="AAO58139.1" FT /db_xref="GI:28855078" FT /translation="MPCEVFEIPRSCYYDHCLRRRSTNSELVRLRGRFNELFTQSRSA FT AGSRSIVSLMQEDSEQIGRFKVRGLMRELGLISKQPGSHDYKKATVERPDIPNILNRE FT FDVTAPNQVWCGDITYIWAQGKWHYLAVVMDLYARRVLGWAFSKKSDTDLVIKALDMA FT YEQRGKPQGLLFHSDQGAQYGSRQFRKRLWRYRVRQSMSRRGNCYDNSPMARVFRSLK FT TEWIPAVGYMTAQEAQGDISHYLMHRYNRVRPHQFNDGLAPAQYEKTLTSCSGSVDHY FT IRLNQQGLIDLNTWMIDSTAVRATRASSGAGKRGPEEPLDHALGRSRGGLTTRIHMVY FT DANGVPLRFMFSPGQASDIAHAQSLLDLVRVPGKPGRPRKRSRWLLADKGYGAEHLRY FT YCDRYRMQPVIPPRAMPRKPGLACPDSLIVQSIGSAT" FT CDS complement(5312676..5313014) FT /gene="PSPTO4697" FT /note="This gene is missing the translational start site FT found in other IS element copies elsewhere in the genome, FT but it might be supplied by OrfA in a programmed FT frameshift.; similar to GP:12484141; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPs1, transposase OrfB" FT /protein_id="AAO58140.1" FT /db_xref="GI:28855079" FT /translation="MLDQISLPGSKGHPRKHCRYVLADKGHDSQILRQYCDRYGMQPV FT IPLRRMHRKPRPGVPRLFDGTQCRKRNGIGRLFSLLKEKRRICTHYDKLASSFKAMVT FT LGMHRKMLAG" FT /colour=178 58 238 FT MBL complement(5312676..5313014) FT /gene="PSPTO4697" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="This gene is missing the translational start site FT found in other IS element copies elsewhere in the genome, FT but it might be supplied by OrfA in a programmed FT frameshift.; similar to GP:12484141; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPs1, transposase OrfB" FT /protein_id="AAO58140.1" FT /db_xref="GI:28855079" FT /translation="MLDQISLPGSKGHPRKHCRYVLADKGHDSQILRQYCDRYGMQPV FT IPLRRMHRKPRPGVPRLFDGTQCRKRNGIGRLFSLLKEKRRICTHYDKLASSFKAMVT FT LGMHRKMLAG" FT CDS complement(5313602..5327197) FT /gene="PSPTO4699" FT /note="This gene consists of four complete FT condensation-amino acid adenylation/ligation-thiolation FT modules followed by a thioesterase. The initial FT condensation domain implies that another thiolation FT domain-containing protein precedes this one in the FT functional complex although no such component is found FT upstream of this gene. This gene is found within the FT coronatine biosynthesis gene cluster and does not appear FT to be functionally related to those genes. Prediction of FT amino acid specificities at http://raynam.chm.jhu.edu/ FT nrps/index2.html suggests the sequence: FT Leu-Ser-unknown-Ser. If expressed, this gene may direct FT the biosynthesis of an undescribed natural product.; FT similar to GP:3510629; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="non-ribosomal peptide synthetase, terminal FT component" FT /protein_id="NP_794446.1" FT /db_xref="GI:28871827" FT /translation="MKPSNQKASKNSNFSYELSSVQQGIWLGQIADSNIPLYNIGMRL FT EINGDLDIPMFEKAINLVAKHNDALRLALFHEGDIARQRVLPSVDIRLALVDFSDYVD FT SVERALEYLQQSFSRPFNPLEGILWEVQLVRCSASHHYWLGRCHHLVMDGAGVTLFCH FT AVEKAYNNLLAGIDELEEAPSYSDFLIKDKAYLSSSRLERDRAFWRERYTQLPPPLLQ FT WSGDHAVGSMCKSGHIRSTIKRDLFNALVAVATEHDLSPVAIFFAAVGAYFSRVGDAE FT EVIIGMPLHNRTTACQKKTIGMFSSVIPIGVRVDPNRSLLELMGNVAAELRRCYRHEH FT FPIAELNRALNIGHSRRKQIFDITLSFEKFDADFIFGGSPAQAIRMYSGFDQTPLSIA FT ICDYYSDDDIVVDFNFNLTCFGQDEIERIRDRITLLLKLVAAHDSTPISQLALMGETE FT RRQVLVEFNATHQALQQDLLVHQLFEQQAQQQPQALALVCGDECVTYADLNRRSSQVA FT HVLLSLGIVADDRVAICVERSVEMVVGLLGILKAGGAYVPLDPGYPLERLRYMLEDSA FT PVAVLVQPETRELLGALAMPVLDLQSANWAVKAELDRVSPTVTPQHLAYVIYTSGSTG FT QPKGVMIEHRNLVNLVAWHCDAFDLTHHNRVSSVAGVGFDACAWEIWPALCVGASLSL FT LPGQALGNDVDALLWWWRRQDLDVSFLPTPVAEMAFTQEIEPATLQTLLIGGDRLRRF FT PNPDSQVALINNYGPTETTVVATSGLIDATQSVLHIGRPIANTQVYLLDAHGQPVPIG FT VSGEIHIGGAGVGRGYLNLPELTAERFVEDPFSAEPAARMYRSGDLGRWLADGNIEYL FT GRNDDQVKIRGLRIELGEIETQLKQIANIREAVVVAREDTPGEKRLTAYYTQQEAKQA FT ITAQTLRTALQARLPEYMVPAAYVKLSEWPLTPNGKLDRRALPTPGDDAYASGDYEAP FT AGKVERALADIWQELLGIDRAGRHDHFFELGGHSLLAMRLISLVRQRLNVELRLAELF FT AHPQLEALACVVEQAQSNALPQIAPVSREMPLPLSFAQQRQWFLAQMEGASVAYHIPA FT GLRILGALDEPALQRSLNRIVARHEVLRTTFVQQTADQSVVLRIHPEETGCPLRKYDL FT TTHADGSRELARLVDEEAIRRFDLQQGPLIRGSLVRLSDEEHVLLLTMHHIVSDGWSM FT GILTRELGALYASGCQDEAAPLPPLLIQYADYAMWQRSWLSGEVLHKQSTYWQTALLD FT APALLMLPADRVRPAQQDYTGASVAVVLDATLSNELKTLSRRHGTTLFMTLLAGWATV FT LSRLSGQDEVVIGSPVANRMSAEVEGLIGFFANTLALRVDVSDDPTVEALLSRVKACT FT LAAYEHQDLPFEQVVELLKPVRSLSHSPLFQAMLSWQNMPTAELAIDGLELTLLDSVV FT RTTKYDVSLDLAEVEGRIVGSLEYATALFDRDTAQSYVAYLERVLRAMVENERQVVGA FT IKLLGETERRQVLVEFNATHQALRQDLLLHQLFEQQAQQQPQALALVCGDERVTYADL FT NKRSNQVAHVLLSLGIVADDRVAICVERSVEMVVGLLGILKAGGAYVPLDPGYPLERL FT CYMLEDSAPVAVLVQPETRELLGALGALAMPVLDLQSANWAAEAEHDRVLSTVTPQHL FT AYVIYTSGSTGQPKGVMIEHCAIVNRLLWAQDHYRLSREDRFLQKTPFGFDVSVWEFF FT LPLLAGAQLVIARPAGHQDPEYLAELIAGSGVTILHFVPSMLQSFLNQVGPLACSTLR FT QVFCSGEALPYSLQKHFEQRFAHVQLHNLYGPTEAAVDVTYWHCVPDLHTGIVPIGRP FT VANTRLYLLDPHMQPVPVGVRGEIYIAGIQLARGYLNRDALTAERFVKDRFSNDPTAR FT MYRSGDLGRWLADGNIEYLGRNDDQVKLRGFRIELGDIEAHLAGCAGVGEAVVVAQED FT TPGEKRLIAYYTTREAKEIIAVQTLRAALQASLPEYMVPAAYVKLSGWPLTPNGKLDR FT RALPAPEGDAYVSRGYEAPRGKVEMALAEIWQELLDVERVGRHDHFFELGGHSLLAVS FT LMGRMRQAGLSADVRMLFAQPTLSAFAEVLGNGHEVEVPANGIVVGCTRITPSMLPLA FT DLSEDAIERIVSTVPGGTANVQDIYALAPLQEGVLFHHLASLEGDPYLLNTRFALPSE FT DHLKAFVRALQGVIARHDILRTAVLWEGLDEPVQIVWREAPLAVEALELKAADGDIEQ FT QLQERFDPRHCRLDLTKAPLMKMAYAYDDANSRWVAILLFHHMVLDHMALEVVQHEVQ FT ADLLGQAARLPTPVPYRNHVAQARLGVSQAAHEAFFQEMLGQVTEPTLPFGLHDVQGD FT GRDIRQARQAVPAELAGRIRRQARSLGVSAASLHHLAWAHVLGRTSGREEVVFGTVLL FT GRMQGGDGADRSLGMFINTLPVCLNVGEQSVSEGVKATHARLTALLGHEHASLPLAQR FT CSAIAPSLPLFSALLNYRHSAQPEISDQADRPWGEIEVLGWNEWTNYPLTLAVDDLGE FT GFALTVQSTAGVDPQRVCAYMETALESLVEALEHYPESLLRRLDVLPRAERQLLQEWN FT ATAVDYPQDTCVHQLFETQVEKTPEAIALVFEARKFTYAQLNARANQLAHYLIGLGIG FT PDDRVAICVERSPEMVVGLLGVLKAGAAYVPLDPTYPEQRLRYMLEDSAPAAVLVQRM FT TRALPGKLAVPLLDLEGGGWESEADYDPVARAVKPHHLAYVIYTSGSSGRPKGVLIEQ FT KGFRNLMHWYLDELKLASDDAVLLVSSYSFDLTQKNILGPLLVGGTLHLAREAFIPDV FT LLKQIQRERITHINLSPSAFNALINANDSRQLDSIRRVVLGGEPVQFARLEMLPEPRP FT EFINSYGPTECSDVVAWHRLVEDIDCYRSSVFPIGRPIANTRIYLLDVHGQPVPIGVS FT GEIYIGGAGVARGYLNLPELTAERFLDDPFSAEPAVRMYRSGDLGRWLADGNIEYLGR FT NDDQVKIRGFRVELGEIESQLAVCPGVREAVVLAREYSPGDKRLVAYLTAQEGAVLSA FT AQLREQLSQGLTEHMIPSAFVTLASFPLTPNGKLDRRALPAPEDDAYASRDYEAPVGE FT VEPALAEIWQALLGIDRAGRQDHFFELGGHSLLAVQLVSRLRRQFGVDVALRDVFAEP FT TLQGLARQVTNARLTAQPPLTPVDRNLPLPLSWAQQRLWFLDQLDRAAGAAYHIAAGL FT RLRGQLNRDALQATLDRIVARHEILRTHFVLHKGQAIQLIAPAAQGFALATHDLRSLG FT STAQHEAVERLAREESVAPFDLSSGPLIRGRLVQLSETEHVLLVTQHHIVSDGWSTGV FT LLQEIGTLYRAFSQGLADPLPALAFQYADYAASQRQWLQGETLQTQVDFWRQHLSGAP FT ALLELPTDHRRPPLRSYAGGRVSLALGPALTAGLRQLGQRHGATLFMTLLAGWSSLLS FT RFSGQDDVVIGTPVANRPRSELESLIGFFVNTLALRIRPEGSLSVAALLEQVKAVMLA FT AHAHQDLPFEQVVEALQPPRSLGHSPIFQVMLALNNTPGGGELSLPELSLEPLQTPHT FT TAQFDLSLSLVEAKGGLLGSLEYASDLFERATIDRMAGHLQVLLEGMVADDQQPVGKL FT PLLSCAQRRQVLETFNDTAAAYPADKLLHQLFEERVAQHPDALAVVDEAGSLTYGELN FT VRANRLAHYLIGLGVQPDDRVAICVQRSLEMVVGLLGILKAGGAYVPLDPGYPPERLR FT YMLEDSAPVGLLLQGETRMLLGELAVPMLDLQEGDWEVEADHNPVVPTIKPQHLAYVM FT YTSGSTGKPKGVANQHNGVVNRLWWAQSEYQLGADDCVLQKTPFGFDVSVWEIFLPLL FT AGAQLVMARPGGHQDPHYLMEVIERRSISMLHFVPSMLQAFVNQTPAGRCSTLKRVIC FT SGETLPHTLQLQSQAHFPKSELHNLYGPTEAAIDVTAWHYVAEQEIGIVPIGRPIANT FT RIYLLDMHGQPVPIGISAEIYIGGVGVARGYLNRPELTAERFLEDPFSAGPAARMYRS FT GDLGRWLADGNIEYLGRNDDQVKLRGYRIELGEIESQLAACLGVREAVVLAREHSPGD FT KRLVAYLTAHEGAVLSATQLREQLSQGLAEYMIPSTFVTLESFPLTPNGKLDRRALPA FT PEDDAYASRGYEAPVGEIEHALAEIWKALLGLERMGRHDHFFELGGHSLLAVQLVSSL FT RERFEVEVALGDLFLHPTICELAASCLSGLNKSLHPNLTTIRKEGTQYPLFLIHEGSG FT DIGYAQQLAKQISSDIPVYGFSASGLQIGEEHLTTIEAMASRYIQGIRHIQPDGPYRV FT AGWSAGGTIAYEIAHQLIGAGATVEFLGLIDTTSDYRHLFNAQEVEHAHPYETPEIEA FT LLRLLSPDARHGAVSHLAAARDFEALLAYTQVQGLLPEGIDSDLAKRYLALIHSIGLA FT LYRYVPPALPTRLTLFSATGESRSDISIGWGGLIPKEQLQIISVRGTHHSILKEPDIR FT ALGRAILEVVTNKGAAKTSLV" FT /colour=135 206 250 FT NRPS complement(5313602..5327197) FT /gene="PSPTO4699" FT /colour=135 206 250 FT promoter complement(5328019..5328051) FT CDS complement(5328266..5329000) FT /colour=178 58 238 FT CDS 5329495..5330472 FT /gene="PSPTO4702" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58142.1" FT /db_xref="GI:28855081" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT CDS 5329495..5330472 FT /old_locus_tag="PSPTO4702" FT /codon_start=1 FT /locus_tag="PSPTO4702" FT /orf_name="PSPTO_1188" FT /product="ISPssy, transposase" FT /function="DNA binding" FT /function="transposase activity" FT /biological_process="DNA transposition" FT /protein_id="AAO58142.1" FT /db_xref="GO:0003677" FT /db_xref="GO:0004803" FT /db_xref="GO:0006313" FT /db_xref="HOGENOM:HBG219632" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="InterPro:IPR002559" FT /db_xref="TIGR:PSPTO0171" FT /db_xref="UniParc:UPI0000008338" FT /db_xref="UniProtKB/TrEMBL:Q877U1" FT /transl_table=11 FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHYP FT KGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETTIL FT NFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDPEMH FT QTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGDAGYT FT GVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHPFRVIK FT RQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /color=178 58 238 FT MBL 5329495..5330472 FT /gene="PSPTO4702" FT /colour=178 58 238 FT promoter 5330688..5330720 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter 5330722..5330777 FT /note="putative CorR binding site; identified by sequence FT alignment; downstream gene(s) exhibit CorR-dependent FT diffential expression; PMID: 16838789" FT CDS 5330802..5331053 FT /gene="hopAQ1" FT /locus_tag="PSPTO4703" FT /note="previously known as HopPtoAA (PMID 11872842; FT Guttman et al, 2002)" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAQ1" FT /protein_id="AAO58143.1" FT /db_xref="GI:28855082" FT /translation="MNRISTSSVNSSFNYTAPTKEAQNRFASAPDNSPLVATTTSITQ FT TLVQPGRLDKNHRLMDSKIINFSVAFNLGRTRSIAGGSA" FT /colour=255 0 0 FT gene 5330802..5331053 FT /gene="hopAQ1" FT /locus_tag="PSPTO4703" FT /colour=255 0 0 FT CDS 5331204..5331803 FT /gene="corR" FT /codon_start=1 FT /transl_table=11 FT /product="DNA-binding response regulator CorR" FT /protein_id="NP_794449.1" FT /db_xref="GI:28871830" FT /translation="MPSSSILLIDDHVLFRSSVALMLEIRLPVGTTVSEASRIEQALA FT QALPAPDLILLDLQLESANGLEGIALLQERWPLARVVIVSAFDRDAIVCEAIQRGAVE FT FHSKTECPEHLLQRIQALLSGEPPEPRTIASTPLTLTSRQRQVLGLLCQGLTNKEIAS FT QLWRSEHTVRSHVQAILTILQASCRTEAADTARRLGLVL" FT /colour=0 0 255 FT diffusible 5331204..5331803 FT /gene="corR" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4704" FT diffusible 5331800..5333372 FT /gene="corS" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4705; This region contains an FT authentic frame shift and is not the result of a FT sequencing artifact; sensor histidine kinase, authentic FT frameshift; similar to GP:6826916, GB:U07474, GB:U07477, FT GB:U07478, GB:U07479, GB:U07486, GB:U07487, GB:U07488, FT GB:U07490, GB:U07499, GB:U07506, SP:P01620, SP:P01621, FT SP:P04207, SP:P18135, SP:P18136, PID:470484, PID:470490, FT PID:470492, PID:470508, PID:470510, PID:470512, FT PID:470516, PID:470534, PID:470548, PID:470554, FT PID:470558, PID:470560, PID:470562, PID:470564, FT PID:470566, PID:470568, PID:470570, PID:470572, FT PID:470574, PID:470578, PID:470580, PID:470582, FT PID:470588, PID:470590, PID:470592, PID:470596, FT PID:470620, PID:470626, PID:470628, PID:510840, FT PID:510842, PID:510844, PID:510846, PID:511004, FT PID:515958, PID:553477, PID:553478, PID:553486, FT PID:561640, PID:561699, PID:561703, PID:561709, FT PID:619431, PID:619617, PID:619761, PID:619762, FT PID:619767, PID:619768, PID:619769, PID:681900, FT PID:695533, PID:695536, PID:722416, PID:722434, FT PID:722436, PID:722452, PID:722454, PID:7" FT CDS complement(5333538..5333711) FT /gene="corP" FT /note="similar to GP:6797731; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="response regulator CorP" FT /protein_id="NP_794450.1" FT /db_xref="GI:28871831" FT /translation="MPSSSILLIDYHALFRSSVALMLEMRLPRTTVSEASRIEEALAQ FT ACRPPISSCSICK" FT /colour=0 0 255 FT diffusible complement(5333538..5333711) FT /gene="corP" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4706" FT CDS 5333913..5334143 FT /gene="PSPTO4707" FT /note="Possibly the ACP required for the activation of FT coronafacic acid, if so, probably ligated by Cma5.; FT similar to GP:7228478; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronafacic acid synthetase, acyl carrier FT protein component, putative" FT /protein_id="NP_794451.1" FT /db_xref="GI:28871832" FT /translation="MSSAKLDQIFEAIFQRPVENDEDIFDLGANSLTAIQLIGQVNEA FT FGANINMEQFFLTPCKQTVLAQLQVAAAADKA" FT /colour=0 0 255 FT diffusible 5333913..5334143 FT /gene="PSPTO4707" FT /colour=0 0 255 FT CDS 5334154..5335002 FT /gene="PSPTO4708" FT /note="distantly related to hydrolases such as OMNI|AF0865 FT (carboxylesterase), GP|3114897 (prolinase) and GP|15029380 FT (lipase). Presumed relevant to coronatine biosynthesis by FT presence in gene cluster.; similar to PIR:A55543, and FT PIR:A55543; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronatine biosynthesis protein, putative" FT /protein_id="NP_794452.1" FT /db_xref="GI:28871833" FT /translation="MHSLFTLNLDLERAGKVICVQSLPFDTARETLLLLSPVGTQCCY FT MKNAALFLISHFNLIILESDTWLAYANEAGVNPEEGVADFIRQFNAALPEPVRVDALV FT GYCSSAPLALLAANQGACRTLLLLNGAYFLKDDGVIKSQYERDVERMMQSIPQGNCAQ FT VYEAVSLLHTKSAYTPSDYRYQQVRPLRELSAFRQYLTFLNSLASLESVRIAQTVKTP FT TLVWCGSQDRYTDTASSRYIAQLLPHSELVEDPDGQHHDFVDGHERLYLTMTHFLTRH FT KQRAIQ" FT /colour=0 0 255 FT diffusible 5334154..5335002 FT /gene="PSPTO4708" FT /colour=0 0 255 FT CDS 5334999..5336786 FT /gene="cmaA" FT /note="Specificity for alloisoleucine implied from FT published pathway for CMA biosynthesis, Ullrich & Bender, FT 1994. Prediction of specificity at FT http://raynam.chm.jhu.edu/ nrps/index2.html suggests an FT aliphatic amino acid.; similar to GP:2673890, and FT PIR:A55543; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronamic acid synthetase, alloisoleucine ligase FT component" FT /protein_id="NP_794453.1" FT /db_xref="GI:28871834" FT /translation="MTSYHSHPPKAYRRFESVCTQAPNAIAVVDEGKLVTYQQLQTQV FT LERSEALIRQGLADHPYMPLMANRCLEYLITMLACCKLGITYVSIEPGTPSKRLIAVL FT EQLGCNHLLLLGQPTDLRPDPTLTCFRLDDCGTLCYDGPALRPPIRRRLDDASVITVM FT FTSGTTGLPKGVRISHDGLLNLVDNVQQQVQGKPRSYVHHSSIGFDAALFEVWVPLLT FT GACVTLQPGAFNIDALDHCVRAASCDVLLLTTSLFHLVAQHRLSMLDAVRVLYVGGEV FT LKPVHARALLLANPRITLVNGYGPTENTVFSTWYSLNKPEDAERDVMPIGQFLHQVYG FT KIVDAKLQEVEVGTPGELLLTGANLALGYLDDALTQTRFLQLPEGTYYRTGDYVIEDE FT HGMLFYQGRIDEQVKIKGFRVEIAEVEHALTQLPGVAQAVVQAHVMNDLEKSLHAFIV FT LRHGSPTIEESKLMSLLGDRLPHYMVPRRIHYLAELPLTANGKVDKRSLQPPEKAAAA FT PPQAGSAVLDIWSGILGTRNLQLEHSIYGYGASSLSVVMAHSRINEILGRTTPFDEVA FT RLSTFQEWVQYYATHEDPVTSLRSQHGND" FT /colour=0 0 255 FT diffusible 5334999..5336786 FT /gene="cmaA" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4709" FT CDS 5336773..5337702 FT /gene="PSPTO4710" FT /note="BarB1 and BarB2 are believed to chlorinate the one FT of the methyl groups of leucine in the biosynthesis of FT barbamycin in Lyngbya majuscula (Chang, et. al., 2002, FT Gene 296:235). While SyrB2 (although not found in this FT genome) is believed to chlorinate the methyl group of FT threonine in the biosynthesis of syringomycin in FT Pseudomonas syringae syringae. Activation of FT alloisoleucine at the beta methyl position is presumed to FT be required for the subsequent cyclization to CMA.; FT similar to GP:2673891, GP:5748808, GP:23452293, GB:M83088, FT SP:P36871, and PID:189926; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronamic acid synthetase, chlorinating enzyme FT component, putative" FT /protein_id="NP_794454.1" FT /db_xref="GI:28871835" FT /translation="MEMTDFSLTKQELQQFDRDGFIGPFTLYEPEEMKQMHKTIRAQL FT FNRTHAPYDAPLDVAITNYDRHLDVDLLTSHVFRKEIVHRVRSILGPDVICWRSEFIP FT KYPGNEGTDWHQADTFAHASGEPQLVWPEGEPFGGAINVWTGFTDATQENGCMQFIPG FT SHKQMNYDETRGMTFDPVTNNNVVKGQYPRGFNGYDYTTLQKDKSWKPDEASAVPIVM FT KAGQFVIFRSMLMHSSLPNSTPDKTRLGYVARYVPGRVKVYPDTDYVKEFGGEYRLDR FT FGVVQVSGTTTDPKNRVARKSLSGMDLKPLVIY" FT /colour=0 0 255 FT diffusible 5336773..5337702 FT /gene="PSPTO4710" FT /colour=0 0 255 FT CDS 5337712..5338134 FT /gene="PSPTO4711" FT /note="This enzyme shows homology to methylmalonyl-CoA FT epimerases which deprotonate their substrate at the carbon FT adjacent to the CoA thioester, forming an enolate FT intermediate. This cyclase is proposed to act on the FT 4-methyl chlorinated alloisoleucinyl-CmaA thioester (the FT proposed product of CmaB) in analogous fashion. This FT enolate can then act as the nucleophile in displacing the FT chlorine atom and closing the CMA cyclopropane ring.; FT similar to GP:18042135; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronamic acid synthetase, cyclase component, FT putative" FT /protein_id="NP_794455.1" FT /db_xref="GI:28871836" FT /translation="MEQPSYLAIDHIAYATRSTEKTSEFFTALGFEVLFHKQPIEKFG FT VLITKLRSPAGEIVEVVEPFRPDSVVSRLLVNVEACIYHAAFRVRDIQTTQISLASMG FT GVSVTNPMTIPYPATEEHRSLTTSHMFHPAVGLFEITG" FT /colour=0 0 255 FT diffusible 5337712..5338134 FT /gene="PSPTO4711" FT /colour=0 0 255 FT CDS 5338144..5338905 FT /gene="cmaT" FT /note="Probably acts to release coronamic acid from CmaA.; FT similar to GP:541616, GB:L22343, and PID:402148; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="coronamic acid synthetase, thioesterase FT component" FT /protein_id="NP_794456.1" FT /db_xref="GI:28871837" FT /translation="MADPFVVQRPWLAPLPGAPMNACRLLLCFPYGGGGASAFNDLSR FT LADVGVATWAVKLPGREDRSMEAPVTRVANVIEAIVDALQSVGIPYAFYGHSFGAGLA FT LDVAHALAERDRPLPTHLVLSGRMPPHTGYSPLLGAMDDNQLWQHVCSESLLPLPTDA FT SCSFARHALGKLKADLALNAQLTYRFIRPLPVPLYVLNGQDDPLLELHRLDEWQRYTS FT TSFHSEYVPGGHFFFNINFQLLYLPLLTALDEQGS" FT /colour=0 0 255 FT diffusible 5338144..5338905 FT /gene="cmaT" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4712" FT CDS 5338911..5339549 FT /gene="PSPTO4713" FT /note="This gene is found within the coronatine FT biosynthetic gene cluster and may have a function in that FT process.; similar to GP:3256494, GB:X05257, and PID:46457; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="alanyl tRNA synthetase-related protein" FT /protein_id="NP_794457.1" FT /db_xref="GI:28871838" FT /translation="MERAFWNTPYLSSLDARVLSIDGRDVVISPTIFFAESGGQESDK FT GCINRIEVTQATVVDERIIYRLAEDPDFAVSDLVSVEIDWPRRYALMRLHFAAEIVLE FT FFYKKFPDLEKIGAHIGQHKARIDFSLEGNVSQYFPEILQGVEHLVAAGLPIESRFTD FT TKCLRRCWYIKGFSEVPCGGTHLRTTGEVGRIRLKRNNIGAHKERVEIYLVD" FT /colour=0 0 255 FT diffusible 5338911..5339549 FT /gene="PSPTO4713" FT /colour=0 0 255 FT CDS 5339568..5340179 FT /gene="cmaU" FT /note="similar to GP:541617; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="cmaU protein" FT /protein_id="AAO58153.1" FT /db_xref="GI:28855092" FT /translation="MFNIMSVLGLLLLMPGPTNTLLLRSGALSGFRHAWSLSLLEYSA FT YLLQISFWGYLLSHIGDSAPWCLQVVQLASMAYLFKTSHRLWRNPDNPYHSSPNVHIS FT RMYFFRLTLINPKGLLVVSFIAPEQTFTDIKLYLYFVAQLSMVVIPIGCAWVLLGAYI FT KRSGHAWLTTLNINRTASVIICCFAVAILSQLTDSLIKTKLAF" FT /colour=0 0 255 FT diffusible 5339568..5340179 FT /gene="cmaU" FT /colour=0 0 255 FT /note="locus_tag: PSPTO4714" FT CDS complement(5342748..5344211) FT /gene="hopAA1-2" FT /locus_tag="PSPTO4718" FT /note="previously known as HopPtoA2 (PMID 12437299; Badel FT et al,2002); identified by match to PFAM protein family FT HMM PF02987" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAA1-2" FT /protein_id="AAO58156.1" FT /db_xref="GI:28855095" FT /translation="MHINQSAQQPPGVAMESFRTASDASLASSSVRSVSTTSCRDLQA FT ITDYLKHHVFAAHRFSVIGSPDERDAALAHNEQIDALVETRANRLYSEGETPATIAET FT FAKAEKFDRLATTASSAFENTPFAAASVLQYMQPAINKGDWLATPLKPLTPLISGALS FT GAMDQVGTKMMDRARGDLHYLSTSPDKLHDAMAVSVKRHSPALGRQVVDMGIAVQTFS FT ALNVVRTVLAPALASRPSVQGAVDFGVSTAGGLVANAGFGDRMLSVQSRDQLRGGAFV FT LGMKDKEPKAALSEETDWLDAYKAIKSASYSGAALNAGKRMAGLPLDVATDGLKAVRS FT LVSATSLTKNGLALAGGYAGVSKLQKMATKNITDSATKAAVSQLSNLVGSVGVFAGWT FT TAGLATDPAVKKAESFIQDKVKSTASSTTSYVADQTVKLAKTVKDMSGEAISSTGASL FT RSTVNNLRHRSAPEADIEEGGISAFSRSETPFQLRRL" FT /colour=255 0 0 FT gene complement(5342748..5344211) FT /gene="hopAA1-2" FT /locus_tag="PSPTO4718" FT /colour=255 0 0 FT promoter complement(5344375..5344407) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS complement(5345081..5346253) FT /gene="hopV1" FT /locus_tag="PSPTO4720" FT /note="identified by Glimmer2; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopV1" FT /protein_id="AAO58158.1" FT /db_xref="GI:28855097" FT /translation="MRFDAARGQKPKAPMDAPSSLRLRAIAGGMPSEEAGTTAPADVN FT QPPPADVRPEMGVGPVRLFVKLMVGTLALSTGVRFARYPGDFAKDPGGSVWAAINLQH FT RSSVTHLEQGNKTVLERFGAHIPKDSACFKARADVTHDVPSGVAGQWNHKTQRVKLNP FT NIHFESHPAQVAGHEFIHCYTHPEFVERHIKHPHWKALNEGLTTRLTEKLPDPKRLLP FT IPLAKDPYHGFKLSTGDSWPDAARRIEDEVGEDVLLKAFFGGDDQAISEVAKAAAQIY FT PKIASRITERELYQAGSMRGGQQLAECYVGALLKNGQKLPDSFTNYLLPVFSYSDISP FT GHAKKIQAQAEKSQKRMGIVFDTAFFSPDLKTQRLALGMLREDLLMHWKKVIPDRK" FT /colour=255 0 0 FT gene complement(5345081..5346253) FT /gene="hopV1" FT /locus_tag="PSPTO4720" FT /colour=255 0 0 FT CDS complement(5346338..5346730) FT /gene="shcV" FT /locus_tag="PSPTO_4721" FT /note="identified by Glimmer2; putative" FT /codon_start=1 FT /transl_table=11 FT /product="hypothetical protein" FT /protein_id="AAO58159.1" FT /db_xref="GI:28855098" FT /translation="MSLSPTLQKLTNILGPTKNAKPVTEAIQWQEGMDITLHVSGDSL FT TLLAKIIELRTDPKDDILLRKLLTHTFPGLRLRRGALTINPDESALVFSYEHDFHLLD FT KARFESLLANFAETAQELRDTATHFRFN" FT /colour=200 150 100 FT gene complement(5346338..5346730) FT /gene="shcV" FT /locus_tag="PSPTO_4721" FT /old_locus_tag="PSPTO4721" FT /colour=200 150 100 FT CDS complement(5347118..5348524) FT /gene="hopAO1" FT /locus_tag="PSPTO4722" FT /note="previously known as HopPtoD2 (PMID 12032338; FT Petnicki-Ocwieja et al, 2002); similar to GP:14994330; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAO1" FT /protein_id="AAO58160.1" FT /db_xref="GI:28855099" FT /translation="MNPLQPIQHSITNSQMSGGQQLEAEGSQAHNSYSHPDRISLSQL FT SQSAHLALDHLSTQPNTDHQRVASLVRNAVQDGKFQLQSSNDTQVTYKTSVCPPANAD FT TMGAAHLINNELTVQARLNDQLEYDIVSAHLYGPSEAISIDASSPPSANDLASSGLSE FT RTHLGMNRVLLRYAVPPRETEDQCVMVIDKMPPPKHGKMSFFRTTNDLSKLPLGMETG FT GLSDLKLAGCERISSVEQVKSIRAALGGGPLTVLDLREESHAIVNGLPITLRGPMDWA FT NAGLSQVDGAARESAMITELKRTKSLTLVDANYVKGKKSNPQTTELKNLNVRSEREVV FT TEAGATYRRVAITDHNRPSPEATDELVDIMRHCLQANESLVVHCNGGRGRTTTAMIMV FT DMLKNARNHSAETLITRMAKLSYDYNMTDLGSISALKRPFLEDRLKFLQAFHDYARNN FT PSGLSLNWTQWRAKIALE" FT /colour=255 0 0 FT gene complement(5347118..5348524) FT /gene="hopAO1" FT /locus_tag="PSPTO4722" FT /colour=255 0 0 FT promoter complement(5348578..5348610) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter 5350034..5350065 FT /pseudo FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; regulatory function of this putative promoter FT appears to have been orphaned by the insertion of a FT transposable element (PSPTO4524)" FT CDS 5350102..5350647 FT /pseudo FT /color=255 0 0 FT CDS 5350102..5350647 FT /pseudo FT /color=255 0 0 FT /color=255 0 0 FT CDS 5350688..5351665 FT /gene="PSPTO4725" FT /note="similar to GP:8885851, and GP:1196750; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="IS52, transposase" FT /protein_id="AAO58162.1" FT /db_xref="GI:28855101" FT /translation="MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWAQLEAQVAPFYS FT NTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPD FT ATTLLRFRRLLETHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGK FT RDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYV FT SGDAGYTGAAKRPEHAERDVIWSIAARPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKV FT EHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQAAG" FT /colour=178 58 238 FT MBL 5350688..5351665 FT /gene="PSPTO4725" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:8885851, and GP:1196750; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="IS52, transposase" FT /protein_id="AAO58162.1" FT /db_xref="GI:28855101" FT /translation="MQKTFSELEYTGKKKQTRRDRFLADLEQLVPWAQLEAQVAPFYS FT NTAGKRGRPAIGVSRMLRMYVVQQCFGFSDEGCEDAVYDSQAIRGFMGIDLGRESAPD FT ATTLLRFRRLLETHQLTRLLFETINQHLASRGLLLKEGTIVDATLIAAPPSVKNREGK FT RDPEMHQARKGNQWHFGMKAHIGVDATSGLVHSVVGTAANVADVTQVGQLLHGDETYV FT SGDAGYTGAAKRPEHAERDVIWSIAARPSSYKQHGEGSVLYRVKRKIEYAKAQLRAKV FT EHPFQVIKVRFNHRKVRYRGLEKNTAQLFSLFGLANLMLAKRYLQQAAG" FT CDS 5351817..5353451 FT /pseudo FT /color=255 0 0 FT CDS 5351817..5353451 FT /pseudo FT /color=255 0 0 FT /color=255 0 0 FT gene 5351817..5353451 FT /locus_tag="PSPTO_4726" FT /old_locus_tag="PSPTO4726" FT /note="This region contains an authentic frame shift and FT is not the result of a sequencing artifact; This gene is FT disrupted by an IS element insertion.; HopD protein, FT interruption-C; previously known as HopPtoD-related; FT similar to GP:14905934; identified by sequence similarity; FT putative" FT /pseudo FT /color=255 0 0 FT CDS complement(5353685..5355166) FT /gene="hopG1" FT /locus_tag="PSPTO4727" FT /note="Previously known as HolPtoW (PMID 11872842; Guttman FT et al, 2002) and HopPtoG (PMID 12032338; Petnicki-Ocwieja FT et al, 2002)." FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopG1" FT /protein_id="AAO58163.1" FT /db_xref="GI:28855102" FT /translation="MQIKNSHLYSASRMVQNTFNASPKMEVTNAIAKNNEPAALSATQ FT TAKTHEGDSKGQSSNNSKLPFRAMRYAAYLAGSAYLYDKTANNFFLSTTSLHDGKGGF FT TSDARLNDAQDKARKRYQNNHSSTLENKNSLLSPLRLCGENQFLTMIDYRAATKIYLS FT DLVDTEQAHTSILKNIMCLKGELTNEEAIKKLNPEKTPKDYDLTNSEAYISKNKYSLT FT GVKNEETGSTGYTSRSITKPFVEKGLKHFIKATHGEKALTPKQCMETLDNLLRKSITL FT NSDSQFAAGQALLVFRQVYAGEDAWGDAERVILKSHYNRGTVLQDEADKIELSRPFSE FT QDLAKNMFKRNTSIAGPVLYHAYIYIQEKIFKLPPDKIEDLKHKSMADLKNLPLTHVK FT LSNSGVGFEDASGLGDSFTALNATSCVNHARIMSGEPPLSKDDVVILIGCLNAVYDNS FT SGIRHSLREIARGCFVGAGFTVQDGDDFYKQICKNASKQFYNG" FT /colour=255 0 0 FT gene complement(5353685..5355166) FT /gene="hopG1" FT /locus_tag="PSPTO4727" FT /colour=255 0 0 FT promoter complement(5355224..5355256) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT promoter 5355530..5355562 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; promoter appears to be responsible for the FT HrpL-dependent expression of hopQ1-2, despite the long FT intervening stretch of insertion sequences and FT pseudogenes; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT gene 5355978..5356022 FT /locus_tag="PSPTO_5623" FT /note="This region contains an authentic frame shift and FT is not the result of a sequencing artifact; This gene FT isdisrupted by an IS element insertion.; HopH protein, FT interruption-N; identified by sequence similarity; FT putative" FT /color=255 0 0 FT gene 5355978..5356022 FT /locus_tag="PSPTO_5623" FT /note="This region contains an authentic frame shift and FT is not the result of a sequencing artifact; This gene FT isdisrupted by an IS element insertion.; HopH protein, FT interruption-N; identified by sequence similarity; FT putative" FT /color=255 0 0 FT CDS 5356088..5356525 FT /pseudo FT /color=178 58 238 FT CDS complement(5356558..5357367) FT /gene="PSPTO4729" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58164.1" FT /db_xref="GI:28855103" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(5356558..5357367) FT /gene="PSPTO4729" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58164.1" FT /db_xref="GI:28855103" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(5357364..5358386) FT /gene="PSPTO4730" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58165.1" FT /db_xref="GI:28855104" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(5357364..5358386) FT /gene="PSPTO4730" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58165.1" FT /db_xref="GI:28855104" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 5358542..5359036 FT /pseudo FT /color=178 58 238 FT gene 5359162..5359782 FT /note="C-term region of HopH; disrupted by an authentic FT frameshift" FT /color=255 0 0 FT gene 5359162..5359782 FT /note="C-term region of HopH; disrupted by an authentic FT frameshift" FT /color=255 0 0 FT CDS 5359854..5360336 FT /gene="holQ1-2" FT /locus_tag="PSPTO4732" FT /note="previously known as HolPtoQ2 (PMID 12615215; FT Greenberg and Vinatzer, 2003) and HolPtoQ-like (PMID FT 12928499; Buell et al, 2003); similar to GP:17427254, and FT GP:19071520; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopQ1-2" FT /protein_id="AAO58166.1" FT /db_xref="GI:28855105" FT /translation="MSSPALERSKSAPTLLTSAQREMLAHPVDQYLRDVQKSALKGLW FT EGIQAGLLPGLDDSWFFRTFMPNAQIEAAQMDKNKERSFDDIWPKVTELNLYDLLTLM FT ASVPGAAKLLFKPKATHSEGFGVLEQVGPDDVTHPEKAKLLMSALSKSALVQSTAVPD FT " FT /colour=255 0 0 FT gene 5359854..5360336 FT /gene="holQ1-2" FT /locus_tag="PSPTO4732" FT /colour=255 0 0 FT promoter complement(5361707..5361739) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS complement(5365761..5367314) FT /gene="PSPTO4737" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58170.1" FT /db_xref="GI:28855109" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(5365761..5367314) FT /gene="PSPTO4737" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58170.1" FT /db_xref="GI:28855109" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(5367332..5367691) FT /gene="PSPTO4738" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58171.1" FT /db_xref="GI:28855110" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(5367332..5367691) FT /gene="PSPTO4738" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58171.1" FT /db_xref="GI:28855110" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(5368939..5370987) FT /gene="PSPTO4742" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58173.1" FT /db_xref="GI:28855112" FT /translation="MVDFYEGVVNETQPFDAAGSIPVDPTWRPSADFVICRNVDGEVT FT ACYGGAKWDLNPIRLKANRIAMIGFNSIFKKYDSGQSCLVKEVRYLLFCLFFYVQTGH FT LGRMSAGMLGQYFLTLRTAARYCWDQEANPLVGVISLQQLFSNPAYLNAYSKWMAREN FT IGSTQRRLTKSLISHMVAIGEERLGYKLHGVFNIDFCAVAEVQHQHPVIPTKIYLGVI FT NSVGDWMDFIYPKRKAIEHFLDCFISPYYGYTEAHQKTMFGGPDVVEPEFDQALRLHK FT LDKIFTGDLNCAGRGVLSSAILKVQWILKTVIHIYTGMRDQEVMLLPYNCIDVEEVVA FT ATLDEDGVSRDKPKIVKVLSSTTKFTGYRKSSSWLATDEVVRAVEIARSICRAISNLF FT GVRPEDMPLFLNPAIINRRETKVGVPTWNDVSKPKFLLNQLVITESDFQELQATDPLR FT DFLSAAGFSIGSPWSFTSHQFRRSLAFYGSNSGFISLPTLRKQFKHLSVQMTRYYANN FT FSRLKTIFGYYDEEVGDFVLPKHHVLFEYQIGMPLNIAYDLLSHAFGDGAQLFGGTGS FT YISTQRKKMHESGIHIATLRKKTENQALDGRISFKVTLLGACTYPGKCDSYLLGDITS FT CLSCADGIIERDKLEEAIGDSEADLLLYEPGSGEYQVVEAELTSLKKFHQKFIAVVEV FT " FT /colour=178 58 238 FT MBL complement(5368939..5370987) FT /gene="PSPTO4742" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58173.1" FT /db_xref="GI:28855112" FT /translation="MVDFYEGVVNETQPFDAAGSIPVDPTWRPSADFVICRNVDGEVT FT ACYGGAKWDLNPIRLKANRIAMIGFNSIFKKYDSGQSCLVKEVRYLLFCLFFYVQTGH FT LGRMSAGMLGQYFLTLRTAARYCWDQEANPLVGVISLQQLFSNPAYLNAYSKWMAREN FT IGSTQRRLTKSLISHMVAIGEERLGYKLHGVFNIDFCAVAEVQHQHPVIPTKIYLGVI FT NSVGDWMDFIYPKRKAIEHFLDCFISPYYGYTEAHQKTMFGGPDVVEPEFDQALRLHK FT LDKIFTGDLNCAGRGVLSSAILKVQWILKTVIHIYTGMRDQEVMLLPYNCIDVEEVVA FT ATLDEDGVSRDKPKIVKVLSSTTKFTGYRKSSSWLATDEVVRAVEIARSICRAISNLF FT GVRPEDMPLFLNPAIINRRETKVGVPTWNDVSKPKFLLNQLVITESDFQELQATDPLR FT DFLSAAGFSIGSPWSFTSHQFRRSLAFYGSNSGFISLPTLRKQFKHLSVQMTRYYANN FT FSRLKTIFGYYDEEVGDFVLPKHHVLFEYQIGMPLNIAYDLLSHAFGDGAQLFGGTGS FT YISTQRKKMHESGIHIATLRKKTENQALDGRISFKVTLLGACTYPGKCDSYLLGDITS FT CLSCADGIIERDKLEEAIGDSEADLLLYEPGSGEYQVVEAELTSLKKFHQKFIAVVEV FT " FT CDS complement(5372875..5374362) FT /gene="PSPTO4744" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58175.1" FT /db_xref="GI:28855114" FT /translation="MAAYENTDHEGRLVLIPQVIDAFADLCFGDTPEGSIPVTIFGVG FT RQINGFQVNEAIGDTADRAIFNMPFLFHRNGEPWKEANSFLLSLVKNKHVSSRPADEA FT RRKASRLLDYLIFTENNNIHWMDFSGRRIVHRPTYKYHLYLFQLLERGPAVANQYTSV FT VYQFYKFVSMHWHPIDIARVDSVREIKVAIENKYGFTRQITVEKRSQTQKTNKGKVVP FT IGLVDDEGECLRPLTNPELSDLLSLFDSGGWDAQERLIILLPLLTGSRKQTVLTLRVK FT HVEALMQGLRTPKGTYLLKAGPRTGIDTKGNKPQTLHVPEQLAEDLLTYVRSAYAKNR FT RKRFQLNYATDYPHLKSIPDEDMYVFLSEQANCYYMASNDPRFPFIKTRPLGAVADTL FT KKKIKRSVSSSFPRGFTYHWLRATFAYQLYQHLIPLLKDGHLLSGEDISIIQSRMHHE FT RRETTENYLKLFKMTPDKIRAQEDYEGVLFKMSSYSDLILVDDNA" FT /colour=178 58 238 FT MBL complement(5372875..5374362) FT /gene="PSPTO4744" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58175.1" FT /db_xref="GI:28855114" FT /translation="MAAYENTDHEGRLVLIPQVIDAFADLCFGDTPEGSIPVTIFGVG FT RQINGFQVNEAIGDTADRAIFNMPFLFHRNGEPWKEANSFLLSLVKNKHVSSRPADEA FT RRKASRLLDYLIFTENNNIHWMDFSGRRIVHRPTYKYHLYLFQLLERGPAVANQYTSV FT VYQFYKFVSMHWHPIDIARVDSVREIKVAIENKYGFTRQITVEKRSQTQKTNKGKVVP FT IGLVDDEGECLRPLTNPELSDLLSLFDSGGWDAQERLIILLPLLTGSRKQTVLTLRVK FT HVEALMQGLRTPKGTYLLKAGPRTGIDTKGNKPQTLHVPEQLAEDLLTYVRSAYAKNR FT RKRFQLNYATDYPHLKSIPDEDMYVFLSEQANCYYMASNDPRFPFIKTRPLGAVADTL FT KKKIKRSVSSSFPRGFTYHWLRATFAYQLYQHLIPLLKDGHLLSGEDISIIQSRMHHE FT RRETTENYLKLFKMTPDKIRAQEDYEGVLFKMSSYSDLILVDDNA" FT CDS 5378945..5381041 FT /gene="PSPTO4746" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family domain protein" FT /protein_id="AAO58177.1" FT /db_xref="GI:28855116" FT /translation="MQLPPELAFLSPFFVEPSETYRTAVWLRSDFDEQVWEYSFDYKE FT PKHLDWGLTLEDGSLLTAPKNDTLLKGLKYYLTSSTRDAFGPGETNELQGAMLQRFCH FT ACHIVDYLLINGKRFQLGTYGLEGLTGGNLIEILENVAATPLIAESVYNWKERLRGFC FT LGLLESSNTTALDAVIQNKPSISLITAEQVDEDTLEIPHGWIPKIRAALYLKNLYHKQ FT TNGSQPNTTLISKLLYPETLWGKNQAKITYKILCYNDDSSVFEREYPPAPVTSGLREK FT MRDSTYAMYRRAIYNLGVLHEIPVAAPTINALQLAEHFTPDLSTTGRFRTLPSDVVFK FT SLQHAIEFHLDHGQDLTKAFCRIALECKKRNISPASLTHEEVQAIVGEKLRKFGITQL FT SMAIRSMNSGRYHSGVKGTKDCYFSNLRSNCGLYELIAVYTGAVQLTVGVLMARRISE FT LHMLKAEDCLDETEQWLLFMNAKSTRHLFGLRRKEARPIEPIAADMIKTLIRMQKILV FT RIGYLSNLTTLFAVPDFKGAKKLSDSSAYLYNRNLDLFCDYFEMPLNAEGQRYYLRQH FT QLRRFFAMLFFYCGSFAKLDTLQWMMGHADPKHIYRYITESMDGAVLAGAKAHFAAER FT LIEGDDEDFQDLAQLLKARYGARDFTTVDAHDLEDQIQELVLEGWVEIEPEFFTDHQG FT KQFKVVARLKRVPEAA" FT /colour=178 58 238 FT MBL 5378945..5381041 FT /gene="PSPTO4746" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family domain protein" FT /protein_id="AAO58177.1" FT /db_xref="GI:28855116" FT /translation="MQLPPELAFLSPFFVEPSETYRTAVWLRSDFDEQVWEYSFDYKE FT PKHLDWGLTLEDGSLLTAPKNDTLLKGLKYYLTSSTRDAFGPGETNELQGAMLQRFCH FT ACHIVDYLLINGKRFQLGTYGLEGLTGGNLIEILENVAATPLIAESVYNWKERLRGFC FT LGLLESSNTTALDAVIQNKPSISLITAEQVDEDTLEIPHGWIPKIRAALYLKNLYHKQ FT TNGSQPNTTLISKLLYPETLWGKNQAKITYKILCYNDDSSVFEREYPPAPVTSGLREK FT MRDSTYAMYRRAIYNLGVLHEIPVAAPTINALQLAEHFTPDLSTTGRFRTLPSDVVFK FT SLQHAIEFHLDHGQDLTKAFCRIALECKKRNISPASLTHEEVQAIVGEKLRKFGITQL FT SMAIRSMNSGRYHSGVKGTKDCYFSNLRSNCGLYELIAVYTGAVQLTVGVLMARRISE FT LHMLKAEDCLDETEQWLLFMNAKSTRHLFGLRRKEARPIEPIAADMIKTLIRMQKILV FT RIGYLSNLTTLFAVPDFKGAKKLSDSSAYLYNRNLDLFCDYFEMPLNAEGQRYYLRQH FT QLRRFFAMLFFYCGSFAKLDTLQWMMGHADPKHIYRYITESMDGAVLAGAKAHFAAER FT LIEGDDEDFQDLAQLLKARYGARDFTTVDAHDLEDQIQELVLEGWVEIEPEFFTDHQG FT KQFKVVARLKRVPEAA" FT CDS 5381679..5383103 FT /gene="PSPTO4748" FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58179.1" FT /db_xref="GI:28855118" FT /translation="MDVLNSRRLYSLLGEFKMFRSFSINQVTTVDASNMPFMIWPNGS FT PCIIGNLYIQSLLHRPGRSNGLSRKGSKGGTMAGYAANVGQLLRRCYRDHIDPIHLTD FT GKFTDYIDELREEPSSSNPAQPKKTENAVIDTGKRWLDFLGFVGRFYGKPGFVSLQGA FT IRAREETYYIKTRSGKPIARTYMWHHSFGSYHRSHTRDPITDEQIKLLKATIRVQKAS FT AFVKVRRANILDMLAGTGARRTEIALLRVEDVRAALAMEEPMLRLTTLKREDKAQRVI FT PMLLSTLVKLNRYIEGERRKLMREVYKDGEDHGFVFVSSTTGRPLSSDSISNEVRDLR FT KAAGIECQICPHMFRHAFITKLFVRFVTRHKINNADEFRQALLDTSTFLAEVVSWTGH FT IDPISLERYIDLAFRDVTSYSETLTSVHMVMAMDQYFIEEEELEARLEEGMPIVEYRQ FT AKKALRESSKKDMEIAKRRESSLG" FT /colour=178 58 238 FT MBL 5381679..5383103 FT /gene="PSPTO4748" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF00589" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58179.1" FT /db_xref="GI:28855118" FT /translation="MDVLNSRRLYSLLGEFKMFRSFSINQVTTVDASNMPFMIWPNGS FT PCIIGNLYIQSLLHRPGRSNGLSRKGSKGGTMAGYAANVGQLLRRCYRDHIDPIHLTD FT GKFTDYIDELREEPSSSNPAQPKKTENAVIDTGKRWLDFLGFVGRFYGKPGFVSLQGA FT IRAREETYYIKTRSGKPIARTYMWHHSFGSYHRSHTRDPITDEQIKLLKATIRVQKAS FT AFVKVRRANILDMLAGTGARRTEIALLRVEDVRAALAMEEPMLRLTTLKREDKAQRVI FT PMLLSTLVKLNRYIEGERRKLMREVYKDGEDHGFVFVSSTTGRPLSSDSISNEVRDLR FT KAAGIECQICPHMFRHAFITKLFVRFVTRHKINNADEFRQALLDTSTFLAEVVSWTGH FT IDPISLERYIDLAFRDVTSYSETLTSVHMVMAMDQYFIEEEELEARLEEGMPIVEYRQ FT AKKALRESSKKDMEIAKRRESSLG" FT CDS complement(5402565..5404118) FT /gene="PSPTO4764" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58194.1" FT /db_xref="GI:28855133" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(5402565..5404118) FT /gene="PSPTO4764" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58194.1" FT /db_xref="GI:28855133" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(5404136..5404495) FT /gene="PSPTO4765" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58195.1" FT /db_xref="GI:28855134" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(5404136..5404495) FT /gene="PSPTO4765" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58195.1" FT /db_xref="GI:28855134" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(5406651..5407460) FT /gene="PSPTO4768" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58198.1" FT /db_xref="GI:28855137" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL complement(5406651..5407460) FT /gene="PSPTO4768" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58198.1" FT /db_xref="GI:28855137" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS complement(5407457..5408479) FT /gene="PSPTO4769" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58199.1" FT /db_xref="GI:28855138" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL complement(5407457..5408479) FT /gene="PSPTO4769" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865160; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58199.1" FT /db_xref="GI:28855138" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS complement(5416707..5418173) FT /gene="hopI1" FT /locus_tag="PSPTO4776" FT /note="previously known as HopPmaI (PMID 11872842; Guttman FT et al, 2002); similar to GP:19071496; identified by FT sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopI1" FT /protein_id="AAO58206.1" FT /db_xref="GI:28855145" FT /translation="MINLTHIASSLARAALSDSTKPKMERAINVASHIAGKVALQVTS FT SLLEQKGLLNERQQKGLSMILKALSGKEPVNNVETHEGGGRFNLARAAFDVASVVWER FT DKSMHNVMSFLGVSDSKGKMLFSLGKKLADAMAKPEPGKDNSEATNARHAYFSSNLKL FT NKLMNDLTDQVFNKIRQSNGDRVRRPMPEPFWRPYGAQQQARPQTPPGTRPQANSAPP FT PPPKAEPRPASGRPDGAQQQARPETPPRTRPQANSTPPPPPKAEPRPASGRPDGAQQQ FT ARPETPPRTRPQANSTPPPPPKAEPRPASGRPDGAQQQARPETPPRTRPQANSAPPPP FT PKAEPRPASGRPDGTQQQARPETPPRTRPQANSAPPPPPKAEPSAGGERPSTARPNNT FT SAADASARVGDSAPAKPPVKPLYEHLGLTDMSVDLSAVKKAYRDAAMKNHPDKNRGNE FT AEAAERFKVISNAYKILSDPELRKAYDNGRINEAGNRA" FT /colour=255 0 0 FT gene complement(5416707..5418173) FT /gene="hopI1" FT /locus_tag="PSPTO4776" FT /colour=255 0 0 FT promoter complement(5418197..5418228) FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS complement(5431547..5433007) FT /gene="PSPTO4792" FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO58222.1" FT /db_xref="GI:28855161" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT /colour=178 58 238 FT MBL complement(5431547..5433007) FT /gene="PSPTO4792" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF01609" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy6, transposase" FT /protein_id="AAO58222.1" FT /db_xref="GI:28855161" FT /translation="MLRIERYRAFFVMAYIQGESRSQTSLFPVSLEELIPEDHLVRVI FT DLYVAKLDLVQLGFDKAIPKSTGRPAYDPADQLKLYLYGYFQRIRSSRRLEAECQRNI FT EVMWLINRLKPDFKTIADFRKNNKPAFIATCRAFVRFCRTAGLIAGELVAIDGSKFQA FT VASSRRHVNLKQLKRQEEKLDKRIAQYLAELDEADKAETTDSIDRSAIKAALAQLEAR FT QQDNQSCQALMRSMGIEQFNTHESDARMMRTAKGPRVAYNVQTVVDAEHCLILHHEVT FT QDGDDRKQLEPMAKAAKAELQQDELTVTADAGYSNGKQFQACEDASITAYVPPNRSKN FT PGSQEEQLFERKDFIYEAGHDRFQCPAGKWLTLKQHNKGDRIYQAEVDDCANCALKTQ FT CTRAQRRYVSRHAHEEAFERMEQRMQAHPEMMANRRSIVEHPFGNLKQWLFGNGRFLL FT RQLEGTKAEMALAVNAYNLKRAIKVLGVRHLMALMG" FT CDS 5454870..5456207 FT /gene="hopAJ2" FT /locus_tag="PSPTO4817" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAJ2" FT /protein_id="AAO58246.1" FT /db_xref="GI:28855185" FT /translation="MPSRFTHRPQLRQLIAASSLIALVACAEKPTAADATPLQTSKAQ FT TNAPAVAPTPALVVDDTLTIQPAVSFSEWQAGFRAQALKAGIRADVFDLAFAGVTPDM FT SVVKADRSQPEFSRPVWEYLDGAISAVRVRKGQALLSQYADDLQKIEQQYGVDRQALV FT AVWGMESNFGSFQGSQSVIRSLATLAYEGRRPGFAQSQLLAALEIIQHGDITPDKMLG FT SWAGAMGQTQFIPTTYNTHAVDFDGDGRRDIWNTPADALASTAHYLQSSGWQRGQPWG FT FEVVLGSGFDYSLADSTTRKSLAEWQQLGLKQPDGSAIPVAASQQQAVLLLPAGYRGP FT AFLVLDNFRAILKYNNSTSYALAISLLSDRFKGAGYVVGAWPRADTPLSRSERIELQS FT LLSARQYDAGAPDGIIGANTRKAIRSAQQSFGWPADGYPTHELLEALRKPVGQ" FT /colour=255 0 0 FT CDS complement(5553785..5554186) FT /gene="PSPTO4905" FT /note="This gene assignment is based in part on its FT position within a multicopy insertion sequence directly FT adjacent to an ORF matching several IS3 family FT transposases usign a blastp analysis.; identified by match FT to PFAM protein family HMM PF04218" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfA" FT /protein_id="AAO58333.1" FT /db_xref="GI:28855272" FT /translation="MDSAKRRSQRDYTLAFKLSVVDQVEKGELSYKEAQRCYGIQGRS FT TVLVWLRKHGRQDWSQGASIREQRSRSMTEPTLPPTPEQRIKELEEQLELSNQKAQFF FT EAVVNVLKNDYGVSVVKKPPGKSSRKGKSKT" FT /colour=178 58 238 FT MBL complement(5553785..5554186) FT /gene="PSPTO4905" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="This gene assignment is based in part on its FT position within a multicopy insertion sequence directly FT adjacent to an ORF matching several IS3 family FT transposases usign a blastp analysis.; identified by match FT to PFAM protein family HMM PF04218" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy11, transposase OrfA" FT /protein_id="AAO58333.1" FT /db_xref="GI:28855272" FT /translation="MDSAKRRSQRDYTLAFKLSVVDQVEKGELSYKEAQRCYGIQGRS FT TVLVWLRKHGRQDWSQGASIREQRSRSMTEPTLPPTPEQRIKELEEQLELSNQKAQFF FT EAVVNVLKNDYGVSVVKKPPGKSSRKGKSKT" FT tRNA 5592964..5593050 FT /gene="tRNA-Leu-5" FT /product="tRNA-Leu" FT /note="codon recognized: CUG" FT tRNA 5593211..5593297 FT /gene="tRNA-Leu-6" FT /product="tRNA-Leu" FT /note="codon recognized: CUG" FT VR_#108 5630000..5645000 FT /colour=255 255 0 FT CDS complement(5641904..5642881) FT /gene="PSPTO4971" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58399.1" FT /db_xref="GI:28855339" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(5641904..5642881) FT /gene="PSPTO4971" FT /colour=178 58 238 FT promoter complement(5649753..5649785) FT CDS complement(5671299..5672852) FT /gene="PSPTO4994" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58422.1" FT /db_xref="GI:28855362" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(5671299..5672852) FT /gene="PSPTO4994" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58422.1" FT /db_xref="GI:28855362" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(5672870..5673229) FT /gene="PSPTO4995" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58423.1" FT /db_xref="GI:28855363" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(5672870..5673229) FT /gene="PSPTO4995" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family." FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58423.1" FT /db_xref="GI:28855363" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(5708165..5709001) FT /gene="PSPTO5018" FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy9, transposase OrfB" FT /protein_id="AAO58446.1" FT /db_xref="GI:28855386" FT /translation="MELRPLHSLDGLLKFAGLARSTFYYQQKVLLADDKYAGLKDLIQ FT ATFYEHKGRYGYRRITAALRRAGHLVNHKTVQKLMGQLGLKSLIRVKKYRSYKGETGK FT AAPNLLKRDFKAQYLNQKWATDVTEFKVGGQKLYLSPIMDLYSGEIISYAIARRPLYS FT MVDEMLEGAFKRLGPHEKPILHSDQGWQYRMPIYQRLLNENSITASMSRKGNCYDNAA FT IESFFSTLKFEFFYLNKFNDLDELQAGIEEYIEYYNHSRIKLKLNGLSPVEYRMQAAK FT AA" FT /colour=178 58 238 FT MBL complement(5708165..5709001) FT /gene="PSPTO5018" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy9, transposase OrfB" FT /protein_id="AAO58446.1" FT /db_xref="GI:28855386" FT /translation="MELRPLHSLDGLLKFAGLARSTFYYQQKVLLADDKYAGLKDLIQ FT ATFYEHKGRYGYRRITAALRRAGHLVNHKTVQKLMGQLGLKSLIRVKKYRSYKGETGK FT AAPNLLKRDFKAQYLNQKWATDVTEFKVGGQKLYLSPIMDLYSGEIISYAIARRPLYS FT MVDEMLEGAFKRLGPHEKPILHSDQGWQYRMPIYQRLLNENSITASMSRKGNCYDNAA FT IESFFSTLKFEFFYLNKFNDLDELQAGIEEYIEYYNHSRIKLKLNGLSPVEYRMQAAK FT AA" FT CDS complement(5709001..5709540) FT /gene="PSPTO5019" FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy9, transposase OrfA" FT /protein_id="AAO58447.1" FT /db_xref="GI:28855387" FT /translation="MGKYTEQAKLAAVKEYCAGKAGLRDVAHRHDVDFSCLRQWVAAY FT QIHGPAALKEKRRQRYSDEFKLAVLKRMHDERLSLRQTAALFDIRQFGIINLWQRLFD FT EGALNASSKPPKKAGRPRKMTTPLPPVNSSPINDESRSRDELLAEVKQLRMEVDYLKK FT LDALVQKKQRIAQQKKRKS" FT /colour=178 58 238 FT MBL complement(5709001..5709540) FT /gene="PSPTO5019" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy9, transposase OrfA" FT /protein_id="AAO58447.1" FT /db_xref="GI:28855387" FT /translation="MGKYTEQAKLAAVKEYCAGKAGLRDVAHRHDVDFSCLRQWVAAY FT QIHGPAALKEKRRQRYSDEFKLAVLKRMHDERLSLRQTAALFDIRQFGIINLWQRLFD FT EGALNASSKPPKKAGRPRKMTTPLPPVNSSPINDESRSRDELLAEVKQLRMEVDYLKK FT LDALVQKKQRIAQQKKRKS" FT CDS complement(5733209..5735251) FT /gene="pilJ" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilJ" FT /protein_id="NP_794764.1" FT /db_xref="GI:28872145" FT /translation="MSSTDRSREGARSRTQIILLFVALIVFIMLLFANFAYLNTQSNY FT DKQYIGHAGELRVLSQRIAKNATEAAAGKTQAFKLLADARNDFDVRWGYLRKGDPATG FT LPAAPELIRDELRTVQRDWEGLRKSTDVILASEQTVLSLHQVAATLAETIPQLQAEYD FT KVVENLLQSRAPAAQVVVAQRQALLAERILGSVNTVLAGDETAVQAADAFGRDASQFG FT RVLNGMLEGNATLRITQVEDRDARARLAEIAELFEFVSGSVDEILETSPELYQVREAS FT GNIFNTSQTLLDETSVLANSLENLAKRRTMNTVGGYVLGLLALMSIILIGLVMVRETN FT RQLRETAQKSERNQTAIMRLLDEIENLADGDLTVTASVTEDFTGAIADSINYSIDQLR FT ELVVTINLTAEQVASAVTETQATAMQLSAASEHQALQISAASTAVNDMAASIDQVSAN FT ASESSAVAERSVAIANKGNEVVQNTIHGMDNIREQIQDTSKRIKRLGESSQEIGDIVS FT LIDDIADQTNILALNAAIQASMAGDAGRGFAVVADEVQRLAERSSSATKQIETLVRAI FT QNDTNEAVISMEQTTSEVVRGARLAQDAGVALGEIEGVSRVLAELIESITDAAHQQAE FT SAGQISQTMTVIQQTTSQTTSGTSATAESIGNLAKMASEMRRSVSGFTLPPSKKIG" FT /colour=0 255 0 FT CW_VIR_gene complement(5733209..5735251) FT /gene="pilJ" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5031" FT CDS complement(5735284..5735823) FT /gene="pilI" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus protein PilI" FT /protein_id="NP_794765.1" FT /db_xref="GI:28872146" FT /translation="MAEPRTAFELLLDMDRRCRSLAAGLPLQETHQQDWVGIGFRMGD FT QRFVAPIGEIAEILHEPRHAVMPGVKFWVAGVANLRGRLLPLMDLCGFFGHELTSARK FT QRRVMVVEYNDIFAGLVVDEVFGMQRFSQLSLIPHTPQDVDQRLVPFLRGQFIREQAW FT QIFSPWALVQSADFMDLAS" FT /colour=0 255 0 FT CW_VIR_gene complement(5735284..5735823) FT /gene="pilI" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5032" FT CDS complement(5735838..5736203) FT /gene="pilH" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus response regulator PilH" FT /protein_id="NP_794766.1" FT /db_xref="GI:28872147" FT /translation="MARILIVDDSPTEMYKLTGMLEKHGHEVLKAENGADGVALARQE FT KPDAVLMDIVMPGLNGFQATRQLTKDADTSNIPVIMITTKDQETDKVWGKRQGARDYL FT TKPVDEETLMKTLNAVLAG" FT /colour=0 255 0 FT CW_VIR_gene complement(5735838..5736203) FT /gene="pilH" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5033" FT CDS complement(5736250..5736660) FT /gene="pilG" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus response regulator PilG" FT /protein_id="NP_794767.1" FT /db_xref="GI:28872148" FT /translation="MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDAL FT AKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFKSTPVIMLSSKDGLFDKAKGRIV FT GSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS" FT /colour=0 255 0 FT CW_VIR_gene complement(5736250..5736660) FT /gene="pilG" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5034" FT VR_#109 5750000..5759135 FT /colour=255 255 0 FT promoter 5751475..5751507 FT CDS complement(5756578..5759135) FT /pseudo FT /colour=178 58 238 FT gene complement(5756578..5759135) FT /locus_tag="PSPTO_5056" FT /old_locus_tag="PSPTO5056" FT /note="This region contains an authentic frame shift and FT is not the result of a sequencing artifact; Rhs element FT Vgr protein, authentic frameshift; similar to GP:17431099; FT identified by sequence similarity; putative" FT /colour=178 58 238 FT promoter complement(5761609..5761641) FT CDS 5764733..5765947 FT /gene="hopAN1" FT /locus_tag="PSPTO5061" FT /note="Also known as Ipx53 (PMID 11967070; Boch et al, FT 2002).; identified by match to PFAM protein family HMM FT PF00994" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopAN1" FT /protein_id="AAO58488.1" FT /db_xref="GI:28855428" FT /translation="MLVRGGMRTVQSIGIPSAEMAAGLDADAIVIALKSRTTPSADAV FT AESLAALEWLRERGCEQIFFKYCSTFDSTAAGNIGQVSEALLEQLGSDFTLACPAFPE FT NGRTIFRGHLFVQDQLLSESGMQNHPLTPMTDANLVRVLQAQTTGKVGLLRYDSIAQG FT VEGVRNRIAELRAEGVRMAIADALSDADLYTLGEACADLPLLTGGSGLALGLPGNFRK FT AGKLRDIDAAKQIAISGGEVVLAGSASVATNSQVAAWLEANRPALRINPLDLAAGKPV FT VEQALAFARDAGQTVLIYATSTPDEVKAVQNELGVERSGAMVEAALGEIAKGLLDAGV FT RRFVVAGGETSGAVVQALGVQLLQIGAQIDPGVPATVSSGAQPLALALKSGNFGARDF FT FSKALKQLAGEA" FT /colour=255 0 0 FT gene 5764733..5765947 FT /gene="hopAN1" FT /locus_tag="PSPTO5061" FT /colour=255 0 0 FT CDS 5769093..5769608 FT /gene="PSPTO5065" FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO58492.1" FT /db_xref="GI:28855432" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT /colour=178 58 238 FT MBL 5769093..5769608 FT /gene="PSPTO5065" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO58492.1" FT /db_xref="GI:28855432" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT CDS 5769665..5770444 FT /gene="PSPTO5066" FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO58493.1" FT /db_xref="GI:28855433" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAVKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT /colour=178 58 238 FT MBL 5769665..5770444 FT /gene="PSPTO5066" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO58493.1" FT /db_xref="GI:28855433" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAVKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT CDS complement(5835504..5837660) FT /gene="pilQ" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilQ" FT /protein_id="NP_794860.1" FT /db_xref="GI:28872241" FT /translation="MKWARPSMHSSAQRKLIMTRILSIIGVSLCIAMLSPVLQAANLK FT TLDVAALPGDRIELKLAFDAPVPAPRGYTTAQPARIALDLPGVTSQLETKSRELGTGN FT ARSVVVVQAQDRTRVIINLTTLAPYSSRVDGNNLFVVIGQGAAAAQASQPTTAMGAQR FT VAVPPPAPASARPFIPAGVKAIRNVDFQRGELGEGNVVIDLSNPSIAPDIQEQGGKIR FT VDFAKTQLPEPLRVRLDVKDFATPVQFVSASATGDKASILIEPSGAFDYSAFQTENKL FT TISVRPLTNEDLDRRAADKPVYTGEKLSLNFQDIDVRSVLQLIADFTNLNLVASDTVQ FT GGITLRLQNVPWDQALDLVLKTKGLDKRKVGSVLLVAPADEIAARERQELESLKQIAE FT LAPLRRELLQVNYAKAADIAKLFQSVTSAESKAEERGSITVDDRTNNIIAYQTQDRLD FT ELRRIVSQLDIPVRQVMIEARIVEANVDYNKQLGVRWGGSTNTSRNGKWTTYGLDDNG FT DEGGNTNANLTSNIPFVDLGAADATTGIGLGFVTNNTLLDLELSAMEKTGNGEIVSQP FT KVVTSDKETAKILKGTEIPYQESSSSGATTVSFKEASLSLEVTPQITPDNRIIMEVKV FT TKDEPDYLNAVLGVPPIKKNEVNAKVLISDGETIVIGGVFSNTQSKVVDKVPFLGDVP FT YLGRLFRRDVVSESKSELLVFLTPRIMNNQAISVSR" FT /colour=0 255 0 FT CW_VIR_gene complement(5835504..5837660) FT /gene="pilQ" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5128" FT CDS complement(5837657..5838184) FT /gene="pilP" FT /note="similar to GB:M86917, SP:P22059, and PID:189403; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilP" FT /protein_id="NP_794861.1" FT /db_xref="GI:28872242" FT /translation="MRAARLLCVSVVLAGLAGCGNDNDFADLSEFMDQARARPSGTIE FT PLPKFRPYEAFTYNAAALRSPFQPPIKIDLLNRQKGTRLVAPDEHRVRQFLEGFNIEA FT FEMVGTIGNESGTFALLRGAGGVHRVKVGDYLGRNNGRVVSIGDAQVDVIEIVPDGEG FT AWLERPRSISLKERS" FT /colour=0 255 0 FT CW_VIR_gene complement(5837657..5838184) FT /gene="pilP" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5129" FT CDS complement(5838181..5838804) FT /gene="pilO" FT /note="similar to GB:Z11899, GB:Z11898, GB:Z11900, FT GB:Z21964, GB:Z21963, SP:P31359, SP:Q01860, and PID:35169; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilO" FT /protein_id="NP_794862.1" FT /db_xref="GI:28872243" FT /translation="MNMSEWLEGLRKVDLSELDLNNMGSWPAAIKAIAGVLVAVLIFA FT LGYFFFIQDLETQLESTQASEVALKEQFSNKAFQAANLEPYRKQMEEMENTFGALLRQ FT LPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEAVQQFYIELPIQITVVGGYHDLATF FT VSGVASLPRIVTLHDFEIKPVDSKVPTKLRMSILAKTYRYNDEGLKK" FT /colour=0 255 0 FT CW_VIR_gene complement(5838181..5838804) FT /gene="pilO" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5130" FT CDS complement(5838801..5839427) FT /gene="pilN" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilN" FT /protein_id="NP_794863.1" FT /db_xref="GI:28872244" FT /translation="MARINLLPWREELREARKKRFLTALVCVLVVSVGILFLIDRYVS FT SAIEHQMARNAFLQTQIAQLDIRIKEISDLKARRKQLLERMKIIQDLQGNRPVTGRVF FT DQLARTLPDGVYFSQVKMTSKLIAISGAAESNNRVSDLMRNLEASDWLEAPSLTEVKA FT TTAGAVDQANVFQLTVRQTQPPVAAVAPAGAASVAPTAAPAPAAGAKP" FT /colour=0 255 0 FT CW_VIR_gene complement(5838801..5839427) FT /gene="pilN" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5131" FT CDS complement(5839427..5840491) FT /gene="pilM" FT /codon_start=1 FT /transl_table=11 FT /product="type IV pilus biogenesis protein PilM" FT /protein_id="NP_794864.1" FT /db_xref="GI:28872245" FT /translation="MFELFGKKANTLLGIDISSTSVKLLELSRSGTRYKVESYAVEPL FT PANAVVEKNIAELEGVGQALSRVLIKAKTNVKIVAVAVAGSAVITKTIEMDAGLSDDD FT MENQLKLEADQYIPYPLEEVAIDFEVQGYSVRNPERVEVLLAACRKENVEVREAALAL FT AGLTARVVDVEAYALERSFGLLAAQLGNGHDELTVAVVDIGATMTTLSVLHHGRIIYT FT REQLFGGRQLTDEIQRRYGLSMEEAGLAKKQGGLPDDYVSEVLDPFKEALVQQVSRSL FT QFFFAAGQYNSVDHIMLAGGTASISGLEHLIQRRIGTPTMVANPFADMALSSKVNAGA FT LASDAPALMIACGLALRSFD" FT /colour=0 255 0 FT CW_VIR_gene complement(5839427..5840491) FT /gene="pilM" FT /colour=0 255 0 FT /note="locus_tag: PSPTO5132" FT VR_#110 5853760..5859572 FT /colour=255 255 0 FT promoter 5859272..5859304 FT VR_#111 5865000..5872500 FT /colour=255 255 0 FT promoter 5908418..5908450 FT VR_#112 5920000..5940000 FT /colour=255 255 0 FT CDS complement(5932848..5934401) FT /gene="PSPTO5212" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58638.1" FT /db_xref="GI:28855579" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(5932848..5934401) FT /gene="PSPTO5212" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58638.1" FT /db_xref="GI:28855579" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(5934419..5934778) FT /gene="PSPTO5213" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58639.1" FT /db_xref="GI:28855580" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(5934419..5934778) FT /gene="PSPTO5213" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58639.1" FT /db_xref="GI:28855580" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 5936100..5936459 FT /gene="PSPTO5214" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58640.1" FT /db_xref="GI:28855581" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 5936100..5936459 FT /gene="PSPTO5214" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58640.1" FT /db_xref="GI:28855581" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 5936477..5938030 FT /gene="PSPTO5215" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58641.1" FT /db_xref="GI:28855582" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 5936477..5938030 FT /gene="PSPTO5215" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58641.1" FT /db_xref="GI:28855582" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT VR_#113 5950000..5957500 FT /colour=255 255 0 FT CDS complement(5950789..5951196) FT /gene="PSPTO5230" FT /codon_start=1 FT /transl_table=11 FT /product="flagellar protein FliL, putative" FT /protein_id="NP_794961.1" FT /db_xref="GI:28872342" FT /translation="MKAWILVLLALSLPVMAQEEAKEEGGPPKAAYVSLTPPFVGNYA FT LDGGPKLRVYKADIALRVTGADAEAAVKRNDALIRNQLVSLFTQQTVDSMSSAEAKEN FT IRQEALKQVQRVMNDEEGKPIVEDLLFNNFIVQ" FT /colour=152 251 152 FT FLAGELLA complement(5950789..5951196) FT /gene="PSPTO5230" FT /colour=152 251 152 FT CDS complement(6030902..6032455) FT /gene="PSPTO5304" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58730.1" FT /db_xref="GI:28855671" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSRKQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(6030902..6032455) FT /gene="PSPTO5304" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58730.1" FT /db_xref="GI:28855671" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSRKQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(6032473..6032832) FT /gene="PSPTO5305" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58731.1" FT /db_xref="GI:28855672" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(6032473..6032832) FT /gene="PSPTO5305" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58731.1" FT /db_xref="GI:28855672" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT VR_#114 6037500..6051667 FT /colour=255 255 0 FT VR_#115 6072500..6087500 FT /colour=255 255 0 FT tRNA 6074544..6074619 FT /gene="tRNA-Phe-1" FT /product="tRNA-Phe" FT /note="codon recognized: UUC" FT CDS 6074827..6076035 FT /gene="PSPTO5344" FT /note="similar to GP:14252927; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58770.1" FT /db_xref="GI:28855711" FT /translation="MPLSDTTIRTAKPKDKLYRLTDANGLCLEIAPSGSKLWRYRYRF FT NGKAKMLALGAYPAVTLLKARQLRDSARQLLVEGNDPGEHKKTAQQAQKVEGLTFETL FT AREWFAYNSPRWAESTTYKAKLYMENDLIPGIGARPVKALTRPDLVDLVRKVEARGTL FT NAAGKIRQWLHQIFRYGLAKGVVESNPATDLDVVAAPQKAPRHHPHVPFSELPELLEI FT CDGSKINTLTRCAIHLLVLTAVRPGELRNAPWSEFDLDAATWAIPKERMKARRPHVVP FT LPTQAVDILRQLQPITGRYPLVFAGQHNPSRPMSENTINKALRLLGYENRQTGHGFRH FT LLSTELNGRGYNKDWIERQLAHGDADGIRDTYNHASYLEQRRGMMQAWADSIDALSAG FT SNVVSIKRQA" FT /colour=178 58 238 FT MBL 6074827..6076035 FT /gene="PSPTO5344" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:14252927; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="site-specific recombinase, phage integrase FT family" FT /protein_id="AAO58770.1" FT /db_xref="GI:28855711" FT /translation="MPLSDTTIRTAKPKDKLYRLTDANGLCLEIAPSGSKLWRYRYRF FT NGKAKMLALGAYPAVTLLKARQLRDSARQLLVEGNDPGEHKKTAQQAQKVEGLTFETL FT AREWFAYNSPRWAESTTYKAKLYMENDLIPGIGARPVKALTRPDLVDLVRKVEARGTL FT NAAGKIRQWLHQIFRYGLAKGVVESNPATDLDVVAAPQKAPRHHPHVPFSELPELLEI FT CDGSKINTLTRCAIHLLVLTAVRPGELRNAPWSEFDLDAATWAIPKERMKARRPHVVP FT LPTQAVDILRQLQPITGRYPLVFAGQHNPSRPMSENTINKALRLLGYENRQTGHGFRH FT LLSTELNGRGYNKDWIERQLAHGDADGIRDTYNHASYLEQRRGMMQAWADSIDALSAG FT SNVVSIKRQA" FT promoter 6085756..6085788 FT /note="hrp box; putative HrpL-dependent promoter; location FT identified by hidden Markov model and/or weight matrix FT scans; downstream gene(s) exhibit HrpL-dependent FT diffential expression" FT /experiment="microarray and/or RT-PCR" FT CDS 6085815..6086198 FT /gene="shcA" FT /locus_tag="PSPTO_5353" FT /note="similar to GP:8037768, and GP:8037768; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III chaperone protein ShcA" FT /protein_id="AAO58778.1" FT /db_xref="GI:28855719" FT /translation="MSNLFYKTLLDDFSRSLEMQPLVFDDHGTCNMIIDNTFALTLSC FT DYARERLLLIGLLEPHKDIPQQCLLAGALNPLLNAGPGLGLDEKSGLYHAYQSIPREK FT LSVPTLKREMAGLLEWMRGWREASQ" FT /color=200 150 100 FT gene 6085815..6086198 FT /gene="shcA" FT /locus_tag="PSPTO_5353" FT /old_locus_tag="PSPTO5353" FT /color=200 150 100 FT CDS 6086243..6087385 FT /gene="hopA1" FT /locus_tag="PSPTO5354" FT /note="previously known as HrmA (PMID 8274770; Heu and FT Hutcheson, 1993) and HopPsyA (PMID 11854524; Fouts et al, FT 2002); similar to SP:Q08370, GB:L05500, SP:Q08828, and FT PID:349269; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="type III effector HopA1" FT /protein_id="AAO58779.1" FT /db_xref="GI:28855720" FT /translation="MNPIQSRFSSVQELRRSNVDIPALKANGQLEVDGKRYEIRAADD FT GTISVLRPEQQSKAKSFFKGASQLIGGSSQRAQIAQALNEKVASARTVLHQSAMTGGR FT LDTLERGESSSATTAIKPTAKQAAQSTFNSFHEWAKQAEAMRNPSRMDIYKIYKQDAP FT HSHPMSDEQQEEFLHTLKALNGKNGIEVRTQDHDSVRNKKDRNLDKYIAESPDAKRFF FT YRIIPKHERREDKNQGRLTIGVQPQYATQLTRAMATLIGKESAITHGKVIGPACHGQM FT TDSAVLYINGDVAKAEKLGEKLKQMSGIPLDAFVEHTPLSMQSLSKGLSYAESILGDT FT RGHGMSRAEVISDALRMDGMPFLARLKLSLSANGYDPDNPALRNTK" FT /colour=255 0 0 FT gene 6086243..6087385 FT /gene="hopA1" FT /locus_tag="PSPTO5354" FT /colour=255 0 0 FT VR_#116 6092500..6120185 FT /colour=255 255 0 FT tRNA 6097142..6097217 FT /gene="tRNA-Thr-2" FT /product="tRNA-Thr" FT /note="codon recognized: ACA" FT CDS 6101513..6101872 FT /gene="PSPTO5367" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58791.1" FT /db_xref="GI:28855732" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 6101513..6101872 FT /gene="PSPTO5367" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58791.1" FT /db_xref="GI:28855732" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 6101890..6103443 FT /gene="PSPTO5368" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58792.1" FT /db_xref="GI:28855733" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 6101890..6103443 FT /gene="PSPTO5368" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58792.1" FT /db_xref="GI:28855733" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS 6104051..6104860 FT /gene="PSPTO5370" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58793.1" FT /db_xref="GI:28855734" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 6104051..6104860 FT /gene="PSPTO5370" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:17865161; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58793.1" FT /db_xref="GI:28855734" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS 6105124..6105483 FT /gene="PSPTO5371" FT /note="This gene assignment is based on its position in a FT truncated version of a multicopy insertion sequence.; FT similar to GP:5824138; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58794.1" FT /db_xref="GI:28855735" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNRPRNLVKILYWERNGLCLWLKRLESERFKTSPDETDDAIALTVQELNWLLDGF FT DLWRNRPHQVLTPRFVA" FT /colour=178 58 238 FT MBL 6105124..6105483 FT /gene="PSPTO5371" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="This gene assignment is based on its position in a FT truncated version of a multicopy insertion sequence.; FT similar to GP:5824138; identified by sequence similarity; FT putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58794.1" FT /db_xref="GI:28855735" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNRPRNLVKILYWERNGLCLWLKRLESERFKTSPDETDDAIALTVQELNWLLDGF FT DLWRNRPHQVLTPRFVA" FT promoter 6125242..6125274 FT VR_#118 6145000..6200000 FT /colour=255 255 0 FT CDS complement(6145421..6146974) FT /gene="PSPTO5411" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58833.1" FT /db_xref="GI:28855774" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(6145421..6146974) FT /gene="PSPTO5411" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58833.1" FT /db_xref="GI:28855774" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(6146992..6147351) FT /gene="PSPTO5412" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58834.1" FT /db_xref="GI:28855775" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(6146992..6147351) FT /gene="PSPTO5412" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58834.1" FT /db_xref="GI:28855775" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS complement(6153553..6155589) FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5415" FT /old_locus_tag="PSPTO5415" FT /product="Rhs element Vgr protein" FT /note="identified by match to TIGR protein family HMM FT TIGR01646" FT /db_xref="InterPro:IPR006533" FT /db_xref="UniProtKB/TrEMBL:Q87U92" FT /protein_id="AAO58837.1" FT /translation="MFNPSNETHFSLTVKDFSGDLQVLSFTGTEGISQPFSFDLELVSE FT NPDIDLETLLHKQAFLAFDPQGNGIHGQIYRVAQGDAGKRLTRYTLSLVPQLQYLHHRT FT NQRIYQQMSAQQIIALILEEHGIKSNGYSFQLGQPCPARDYCVQYDETDLHFVQRLCEE FT EGVHYHFQHSQEGHVLVFGDDQTVFPKLSGPTAYVQGSGLVADVPVIKGFQLRLETRTG FT RVTRRDYDFEKPKLQLEAAYKPANESNEPDLEDYDYPGRFVDRARGKFLSQRALERHRA FT DYQQAEGWGDQTALKSGHFLPLSEHPRAEWNDLWLLTEIVHEGKQPQVLEESVTSDTTN FT NKDDFHHGYRNRFLATPWAVLYRPALNHPKPRVLGSQTAVVTGPKGEEIHCDQYGRVKV FT QFFWDREGLADDKTSCWLRVSSGWAGDRYGGISIPRVGMEVLVSFLEGDPDQPLVTGCL FT YHKENQVPYPLPTNKTRTVFKTFSSPGGGGYNELRIEDKKGAEQIFIHAQRDWDENIEN FT DQKIRVGNERHDTVEKNTYTELKAEEHRTTHADRKTEVRMDDHLTVAQNQHVKLGTAQL FT TSAGTEIHLKAGEKIVIEAGVELTVKAGGSFIKLDAGGITMIGPIANVNAGGSAGTGTG FT IGIKPPRLPGVVDQDKAGSLMDPALVNAPPEKVEPKAVFVFSE" FT /colour=178 58 238 FT gene complement(6153553..6155589) FT /locus_tag="PSPTO_5415" FT /old_locus_tag="PSPTO5415" FT /colour=178 58 238 FT CDS complement(6173232..6174209) FT /gene="PSPTO5428" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58850.1" FT /db_xref="GI:28855791" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(6173232..6174209) FT /gene="PSPTO5428" FT /colour=178 58 238 FT CDS 6181106..6181624 FT /codon_start=1 FT /transl_table=11 FT /gene="hcp-2" FT /locus_tag="PSPTO_5435" FT /old_locus_tag="PSPTO5435" FT /product="secreted protein Hcp" FT /db_xref="InterPro:IPR008514" FT /db_xref="UniProtKB/TrEMBL:Q87U73" FT /protein_id="AAO58857.1" FT /translation="MATPAYMSITGTKQGLITAGAFTADSVGNTYQEGHEDQVMVQGFS FT HELIIPRDPQSGQPTGQRVHKPVKITKVFDKSSPLLLAALTSGERLTEITIQWYRTSAA FT GTQEHYYTTKLEDAIIVDIKDYMHNCQDPANAHFTHLEDVEFTYRKITWTHEVSGTSGS FT DDWRSPVAG" FT gene 6181106..6181624 FT /gene="hcp-2" FT /locus_tag="PSPTO_5435" FT /old_locus_tag="PSPTO5435" FT CDS 6181756..6183798 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5436" FT /old_locus_tag="PSPTO5436" FT /product="Rhs element Vgr protein" FT /note="identified by match to TIGR protein family HMM FT TIGR01646" FT /db_xref="InterPro:IPR006533" FT /db_xref="UniProtKB/TrEMBL:Q87U72" FT /protein_id="AAO58858.1" FT /translation="MFAPANQTHFSLTIEGLSNDLQVLALQGREAISQPFAFEVDLVSE FT QPSLDLETLLHKPAFLQLSPDGSGIHGQIYRASQGDSGKRLTRYAVTLRPQLAYLAHRT FT NQRIFQNLTVPKIIGIVLEEHGIQGNAYEFKVGSIYPERIYCVQYDESDLHFVQRLCEE FT EGIHYHFQHSTNGHTLVFGDDQTVFPKLAPVAYQQDSGMVATDPVVKRFDLRMETRTSR FT TTRRDYDFEKPRLTLESENRGDAIPDLEDYDYPGRFVDRERGKQLAKRALERHRSDYQL FT AVGKSDQPLLVSGHFLALTQHPKAKWNDLWLLTEILHEGKQPQVLEESVTSDTTDLKDD FT FHQGYRNRFQATPWDVPNRPPLTHPKPRILGSQSAVVTGPKGEEIHCDQYGRVKVQFPW FT DREGQSDDKTSCWLRVSSAWAGAMYGGIAIPRIGMEVLVTFLEGDPDQPLISGCLYHKE FT NVVPYDLPANKTRSTFKSMSSPGGGGFNELRIEDKKGQEQIFLHAQRDWDENVENDQKI FT RVGNERHDTVEQNSHSEFKAEEHHTVYADRKVEARADDHLTVGANQHVKVGTGQFIEAG FT QEIHLSSGVKVVLEAGSELTLKAGGSFIKIDASGVTLSGPFIHVNDGGSPGNGTPAAPL FT MPGPLLQADADKAGAALTPAQINTLKRNAPFCEECEKCKDGACAI" FT /colour=178 58 238 FT gene 6181756..6183798 FT /locus_tag="PSPTO_5436" FT /old_locus_tag="PSPTO5436" FT /colour=178 58 238 FT CDS 6184525..6189243 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5438" FT /old_locus_tag="PSPTO5438" FT /product="Rhs family protein" FT /note="The annotation is based in part on positional FT information.; similar to GP:7321289; identified by FT sequence similarity; putative" FT /db_xref="InterPro:IPR006530" FT /db_xref="InterPro:IPR013783" FT /db_xref="UniProtKB/TrEMBL:Q87U70" FT /protein_id="AAO58860.1" FT /translation="MDRVADIEAQLDSFKDSLTLYREQTKTWYAELADKGSRATDMPSL FT LGMERVIKAGGSSKAVSMNDDDFSYVAKCPLVGPLLIESKFESLYDIPVGDIQVDVIAV FT EGGAKTTVMLDKQGKGSFQGQPGKAYKIHVHDKVTPAQIDALFKSYDGLSADLEGFLRK FT EWAGFKPQWSNQSASATAMAIGAGILEGGWEAIKGVWDGITKALDILQNPKKFAEELGA FT GADELVKLAKEAPDVMKKAMLLASDEAALFLMVRCASIWVAGLPPTQAAGQTAKMTSAA FT TIGILIDIVISVVLTLAAEGAGLFYLAARLAKYGKIILNAVTGFVKAVFNIIKGFMGYV FT SKYVAVAARGAVSATNQGVAQLRFDGKRNTTVRTSKRLDDAASQSRTHDGKSAAAAQDT FT CVNGCPVSMVTGEELLTLTDGQLDGLLPFEWTRLYRTSAVETDSRLGYGWSHALSHRLQ FT LDDEGVLWIDNENRQTRFPMPTEHRPAITNSLAKAAIYLGNTPGELILTQAGKQPRFYH FT FRAGRLITISDAYDNQLQITYDLVDRVQRIDNNAGRSLLLRYEDRHIVAVDYQQQRPDY FT TDQGERQDPWATVQTLVTYQYNVKGQLVSATTAAGESEHYRYNEQNVIQERQLAGGASF FT FWEWENEGKSSRSIHHWANFSQMDSRYIWDDAGQVTVLNADGSEQVYVHDENARLISET FT TPDGAETQKAYDEKGRLIAEKDPLGAITEYRYDEDGLLIALIPPEDEPVAYEYHRGFVS FT DVRRGKATWKYQRNEQGDITVQTDPDGNETHYSYDLRGRLLEIRHPDGSRHQLGWNGLG FT QLLEERLPDGGQRKYRYDALGRQITRQEETGAITHYQWDAANRLAQATLPGGATRAFSY FT NAYGKVTAERDELGRITRYEYADNLHLVSRRINPDGSQLRYRYDNARLLLTEIENERGE FT HYHLDYYSNGLIQRETGFDGRSTAYEYDLNGQLLKKTEFGDDGSELSTEYQRDAAGRLL FT VKTLADGSAIHYRYDALGRLVSVDDGHWPLAYEYDLQDRLITEHQGWGTLRYEYDTVGQ FT LKHCRLPDGSKLDYHHQRGGQLGSIDLNGSRLTTHQFSAGREQQRQQGLLLSQYQYDEQ FT GRLQAHSVSQQDRHLFHRHYAYDANGNLAGVNDSRKGNRSYHYDPLDRLINVRGTTPES FT FAHDPAGNLLGQGDQPAANLANVKGNRLLMQGDRHYDYDAYGNQIRERRGTGQKLVTEY FT RYDCQHRLIGVSLPGGSVASYKYDAFGRRIEKTIDGHITEFLWQGERLIAESADNRYRS FT YIYEPGTFRPLAMLDGEGPLKAAPFYYQLDHLGTPQELTDYSGEIMWSAKYRAYGNLAT FT LDIAEIENPLRFQGQYFDAETGLHYNRHRYYNPGTGRFLTPDPIKLAGGLNNYQYVPNP FT TGWVDPLGLSGECPDSEKNKIPVEEASSPSNSYDNSEELRPPESNGRRYAAGKHYVNPQ FT DINFSQRGVHGNEYEAKMSQGDWDWSRPGSALNVMEVDGQLVSYDNRRLRAARSVGLNS FT IPIQIVLAEDIMPGSKKTWEKAFKLRREDRRNLLDGEPVPPKGLNTLPKINE" FT /colour=178 58 238 FT gene 6184525..6189243 FT /locus_tag="PSPTO_5438" FT /old_locus_tag="PSPTO5438" FT /colour=178 58 238 FT CDS complement(6190597..6191574) FT /gene="PSPTO5440" FT /note="similar to GP:4514540; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58861.1" FT /db_xref="GI:28855802" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL complement(6190597..6191574) FT /gene="PSPTO5440" FT /colour=178 58 238 FT CDS complement(6194168..6195721) FT /gene="PSPTO5443" FT /note="Lacks an association with an ORF1 as found in other FT versions of this multicopy element elsewhere in the FT chromosome.; similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58863.1" FT /db_xref="GI:28855804" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(6194168..6195721) FT /gene="PSPTO5443" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="Lacks an association with an ORF1 as found in other FT versions of this multicopy element elsewhere in the FT chromosome.; similar to GP:8037785; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58863.1" FT /db_xref="GI:28855804" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS 6195901..6196260 FT /gene="PSPTO5444" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58864.1" FT /db_xref="GI:28855805" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 6195901..6196260 FT /gene="PSPTO5444" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58864.1" FT /db_xref="GI:28855805" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 6196278..6197831 FT /gene="PSPTO5445" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58865.1" FT /db_xref="GI:28855806" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 6196278..6197831 FT /gene="PSPTO5445" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58865.1" FT /db_xref="GI:28855806" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT gene 6204261..6204899 FT /locus_tag="PSPTO_5452" FT /old_locus_tag="PSPTO5452" FT CDS 6204920..6205927 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5453" FT /old_locus_tag="PSPTO5453" FT /product="oxidoreductase, aldo/keto reductase family" FT /note="similar to GP:14524293; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87U61" FT /db_xref="HSSP:Q9KE47" FT /db_xref="InterPro:IPR001395" FT /db_xref="UniProtKB/TrEMBL:Q87U61" FT /protein_id="AAO58873.1" FT /translation="MKYRTLGQSGLKVSTLTLGSMMFGEQTAAEESLRIIDKARDQGIN FT FIDTADVYNGGRSEEIVGRAIAAQRSDWVLATKVAIGPADGVPNRAGLNRKHIFNAIEN FT SLRRLDTDYVDIYYLHKEDHDTPLEVTVSAIGDLIRQGKIRYWGVSNFRGWRIAEIVNV FT AQRLGVDKPVISQPLYNIVNRQAEIEQITAAAYHGLGVVPYSPLARGVLSGKYAPDIAP FT DSESRAGRQDKRLLETEWRVESLRIAQRIQEYVQDKGVGIVEFAIAWVLNNKAVTSAIV FT GPRTEQQWDGYTKALEVSITAEDEAFIDSLVTPGHASTPGFNDTQHFVSGRPVR" FT CDS 6206247..6206984 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5454" FT /old_locus_tag="PSPTO5454" FT /product="transcriptional regulator, GntR family" FT /note="similar to GP:14026709; identified by sequence FT similarity; putative" FT /db_xref="GOA:Q87U60" FT /db_xref="InterPro:IPR000524" FT /db_xref="InterPro:IPR011711" FT /db_xref="InterPro:IPR011991" FT /db_xref="UniProtKB/TrEMBL:Q87U60" FT /protein_id="AAO58874.1" FT /translation="MRKSDREAFLSSVLGNEQPPAHLARTVIEEKLRNAIIDGSLPSGT FT ALRQQELATLFGVSRMPVREALRQLEAQSLLRVETHKGAVVAPLITEDAVDAYALRILL FT ESEALRLSIPLLDADDLAAAASYIEQLEVETDFGQIGRLNRMFHLSLYAKTHNKRLMRL FT VEEGLNEEERFLRFNLSSMGLGKLSQDDHWQLLRLAEQKAVEPCVEALQYHLNRGVQAV FT TQYLQSQKAGNVKPARTKKNTPA" FT CDS 6207790..6208566 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5455" FT /old_locus_tag="PSPTO5455" FT /product="conserved hypothetical protein" FT /note="identified by Glimmer2; putative" FT /db_xref="UniProtKB/TrEMBL:Q87U59" FT /protein_id="AAO58875.1" FT /translation="MYCEKTQLEHKKLELSRHPIFAEISSLHVLQRFMETHVFAVWDFM FT SLTKRLQQELTCTRLPWLPPTDAPAARLINEIVLGEESDDRLGHGHYSHFELYLDAMRE FT IGASTAQIERFIELQKQGVHYATALQQVNAGQAASAFVTHTLDTALHAPAHSVAAAFLH FT GRESVIPLMFQSILDDWGITVEQAPTFRYYLERHIEVDSEDHGPAAEQLLARLVAGDAQ FT RETEVYQAAIAAVESRVQLWDTLRMSMRAPLMQASA" FT CDS 6208627..6209556 FT /codon_start=1 FT /transl_table=11 FT /locus_tag="PSPTO_5456" FT /old_locus_tag="PSPTO5456" FT /product="hypothetical protein" FT /note="identified by Glimmer2; putative" FT /db_xref="UniProtKB/TrEMBL:Q87U58" FT /protein_id="AAO58876.1" FT /translation="MSFIDAWEGRATIRTRPRRIVENDEKLIYPLSRQPLVLSDTFTRE FT CAHLRDYALVQSLYKFINDVVIFETEIVDKTARSIAKDNFAIRFPFACRYDAMTVVVDE FT DYHALVAMDFMQQTIALTGIEPIQLPTEIELSRAIPAALALAPEHLRSAVELICVAIAE FT NTVTHDVAAFAKDDSVKQSIKGLMADHLLDEGRHSGFWARLVRIYWHTAAEQDRECIAR FT ILPVFIAQYLTNDIQNGFDFTLIERLQVPDPVRQALKAETLALSFPVNRHHPLIGNIMR FT FFKSSSMLDDPYVQRALAHYLPVQGSLQ" FT CDS 6209553..6213002 FT /codon_start=1 FT /transl_table=11 FT /gene="mgoA" FT /locus_tag="PSPTO_5457" FT /old_locus_tag="PSPTO5457" FT /product="ornithine acetyl transferase inhibitor" FT /note="This enzyme consists of an amino acid activation FT and ligation domain followed by a thiolation domaintypical FT of non-ribosomal peptide synthetases; similar to the FT ornithine acetyl transferase inhibitor mangotoxin; see FT PMID:17506328" FT /db_xref="GOA:Q87U57" FT /db_xref="HSSP:P0C061" FT /db_xref="InterPro:IPR000276" FT /db_xref="InterPro:IPR000873" FT /db_xref="InterPro:IPR006163" FT /db_xref="InterPro:IPR009081" FT /db_xref="InterPro:IPR010071" FT /db_xref="InterPro:IPR010080" FT /db_xref="InterPro:IPR013120" FT /db_xref="UniProtKB/TrEMBL:Q87U57" FT /inference="similar to AA sequence (same FT species):INSD:ABG00046.1" FT /protein_id="AAO58877.1" FT /translation="MKRLEIVLIGHSLTLGELSTELQDHGHGARLIGEQHALAGLTMPD FT ACILIEDGSLDLSPMLPQAYGRCVHLSLRVGFDSTLAFGLPRLELLCWHGSVKAQRLIV FT REWLSSEASGNGRELRDRAIARLVDLIALQVSRLSRDDDYFIISVPTTTPAQSDRQCGL FT QAVDQLLFEHRLNQTAQPRLLKLAETSITERLEQALLKFAERPALSVGNQTFSYGELHA FT HSIAIEYLLLPMLAHAKADAPPVIGICLAKSPELYAGILAILGCGAVYLPLDPGQPVQR FT QQYILQNSGAMLLLHDGSHPLAAAEFPALDISAVRVVNVALTKRPVRADQHAPCMALYT FT SGTTGQPKGVSLSQRNLSHFTAWYAEHVSLSEHSRVLQFSTLSFDSSVIDIFPTWLSGA FT ELVVPDEDQRRDPLQLISVLKQGITHAFLPPALLSVLPLDQPLGIEHVMTGGDVCEPHV FT IAQLCGQCHFHNLYGPTEATVLVTACEFQPSSSNRHLGRPIANSQVWILDEHLQPVPEQ FT TQGELYIVGPGVCLGYIDNPELTAERYVWLTLPEGQELRAYRTGDIAQWTADGVVLSGR FT RDNQVKIRGFRVEPEEIEHCLRASQFYRQVAVVIDAQRRILAFVAQPYSAHDEQALRAH FT VQRLLPDYMHPAVYTTLPSMPFAHNGKVDRKALLEIPLSFAEHPTRRLPSTAQEQALLE FT LWAELLELPPGDISTDESFFNLGGHSILLSRLLLGIRERFGRSIPINRFIEAPTVLTLA FT SLIDSDGTAGYTISAQALLDADADTPLTTLPVSQLGDVHKVIVTGANGFLGVHIVEALL FT NWGTTEIACLVRETPEQSAQQRFEYALRENRLDHLDLSRVKVYPADVTRPRLGLDDAVY FT ERLDLEFGVLVHNAANVNHVQDYETLARDNVAPVFECLKLCEGRSKKIFNFVSTLSACS FT AIDAAGNVLEQPAAATPPIYIKNGYNLSKWVAERVLQRARDQGVWVNIYRPGNIAFNSV FT TGVCQPQKNRLMLMLKGSLQLGQVPQFPINFDLMPVDFLARFIGFHASRYQPERAVFNL FT HNPEPLSWNNYVEAFREAGRDFELVSVEQWQAQLGRVDSQNALFGVLGFYLDGFEEDIG FT DISMIEYQNTQSGVRCMGEQYPQKTPALLRKGCDYLKEIDFI" FT gene 6213036..6213512 FT /locus_tag="PSPTO_5458" FT /old_locus_tag="PSPTO5458" FT rRNA complement(6213909..6214028) FT /gene="Ps5SE" FT /product="5S ribosomal RNA" FT rRNA complement(6214176..6217078) FT /gene="Ps23SE" FT /product="23S ribosomal RNA" FT tRNA complement(6217322..6217397) FT /gene="tRNA-Ala-7" FT /product="tRNA-Ala" FT /note="codon recognized: GCA" FT tRNA complement(6217442..6217518) FT /gene="tRNA-Ile-5" FT /product="tRNA-Ile" FT /note="codon recognized: AUC" FT rRNA complement(6217622..6219139) FT /gene="Ps16SE" FT /product="16S ribosomal RNA" FT CDS 6273896..6274411 FT /gene="PSPTO5508" FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO58927.1" FT /db_xref="GI:28855869" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT /colour=178 58 238 FT MBL 6273896..6274411 FT /gene="PSPTO5508" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428452; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfA" FT /protein_id="AAO58927.1" FT /db_xref="GI:28855869" FT /translation="MAKYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVANY FT KSHGHTGHRKPGLRYSEAFKRSVLEHKREHGLSLRQTAAHFGIGDPGQIVIWEQQHYS FT NDLAPYVPKRRKSVAMPKKPYPTAPVIDDDTQKTRDQLMAELEYLRMENAYLKKLEEL FT KEQQRRQKKKP" FT CDS 6274468..6275247 FT /gene="PSPTO5509" FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO58928.1" FT /db_xref="GI:28855870" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT /colour=178 58 238 FT MBL 6274468..6275247 FT /gene="PSPTO5509" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GP:17428451; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy8, transposase OrfB" FT /protein_id="AAO58928.1" FT /db_xref="GI:28855870" FT /translation="MARSTFYYQVQVQSRPDPDAALKQEVERIYHEERGLYGARRITA FT VIRNSGTLVNKKVVERLMAELGLRSVVRPKKYRSYKGTVGKIAPNLLERNFTAQRPNQ FT KWVTDVTEFKVANRKLYLSPVMDLYNGEIVAYELSTRPCFELVTSMLDKALQQLQDEP FT KLVMHSDQGWQYQHAQYRQKLAAKGVKQSMSRKGNCLDNAAMESFFGTLKSEFFYLKR FT FESIEELTAGLEEYIRYYNHDRIKLKLGGLSPVKYRTQAAS" FT VR_#119 6297321..6317755 FT /colour=255 255 0 FT CDS complement(6312909..6314462) FT /gene="PSPTO5543" FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58962.1" FT /db_xref="GI:28855904" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL complement(6312909..6314462) FT /gene="PSPTO5543" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="identified by match to PFAM protein family HMM FT PF03050" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO58962.1" FT /db_xref="GI:28855904" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT CDS complement(6314480..6314839) FT /gene="PSPTO5544" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58963.1" FT /db_xref="GI:28855905" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL complement(6314480..6314839) FT /gene="PSPTO5544" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO58963.1" FT /db_xref="GI:28855905" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 6330285..6331262 FT /gene="PSPTO5556" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58975.1" FT /db_xref="GI:28855917" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 6330285..6331262 FT /gene="PSPTO5556" FT /colour=178 58 238 FT VR_#120 6330285..6387575 FT /colour=255 255 0 FT CDS 6339803..6340780 FT /gene="PSPTO5564" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58983.1" FT /db_xref="GI:28855925" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 6339803..6340780 FT /gene="PSPTO5564" FT /colour=178 58 238 FT CDS complement(6342781..6344472) FT /codon_start=1 FT /locus_tag="PSPTO5566" FT /orf_name="PSPTO_5566" FT /product="Transposition protein, TnsD-related protein " FT /protein_id="AAO58985.1" FT /db_xref="HOGENOM:HBG492648" FT /db_xref="TIGR:PSPTO5566" FT /db_xref="UniParc:UPI0000009714" FT /db_xref="UniProtKB/TrEMBL:Q87TV5" FT /transl_table=11 FT /translation="MSDLLFFPISMPGETLHSRITRYHFLSGNKTAGETFRDLFGSATF FT SVGMLPKQIEVLATRLPGDTESNLDELIFTNTTFPLYRPFLGINQGGDCAGAGRGLHGV FT ARIPRREGTVHGKAKLCPTCVQQDLLELGYAYWHRSHHLPGVSVCWRHGDSLMHACPKC FT SHPFFRKLRLLPGLSEPCVCGWSALAPAKANQGIQLDKKFAEFAHELLQRNLPLISSDA FT LCSSYLRQCRKKGFVHGRLAGTAKLFNSIRDKYGDEALSQMDSAYATGKHEQWIRFTSY FT KGQMDMPLARHMIIALHLFGSVDNFEDALKKESILQSVAGARLASLQEKPKVGSKAQFR FT QKIETVLAVRAEASLEYLWTSAYKATRWLYENDKAWLMAKISTPKREHAEVEDVSDSRD FT SAFAAILLEGGKDLYRISRRQKRVNLSNLQKLLPVRLPPDPSTRKSKFPLASQRVEILL FT ESVWHFRLRRLVCALSDMTRLNLPINIGSLYTVSSVPGPVFQAIVSFFEWDLESFARNG FT VDPDALLKSTGVSRDWQGPPGFNVALGGNAYYHNKNVGGFVVRVEG" FT /colour=178 58 238 FT gene complement(6342781..6344472) FT /locus_tag="PSPTO_5566" FT /old_locus_tag="PSPTO5566" FT /colour=178 58 238 FT misc_feature 6349486..6349623 FT /evidence=not_experimental FT /label=ISPsy7_upstream_200 FT /note="From model DC3000_ISPsy7_upstream_200.hmm" FT /E_value="5.5e-32" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=103.800000 FT CDS 6349624..6350646 FT /gene="PSPTO5571" FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO58989.1" FT /db_xref="GI:28855931" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT /colour=178 58 238 FT MBL 6349624..6350646 FT /gene="PSPTO5571" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="similar to GB:X77384, GB:U14965, GB:X75085, FT SP:P42442, PID:474417, PID:475064, and PID:556616; FT identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy7, transposase" FT /protein_id="AAO58989.1" FT /db_xref="GI:28855931" FT /translation="MKNGLKLLGIDIGKNSFHLIGHDAGGHQVLRKCFNRNRLLQFAA FT QIEPCTIAMESCGGSHWLARKLASLGHRVKLIAPQHVKPYVTGNKNDFIDAEAICEAA FT SRPRTHYVAVKTVEQQVLSVQHRLRESLVCHRTEAINRVHGFLLEFGIALPATKAAIA FT KVPELIDDSRSDLPLQFKRVMEHLLEDIHRLDTEIKACDAQIKQQLAQDDAGTRLMTI FT PGIGPITASAFVADLGDASNFRASRDLSAFLGLVPRQFSTGGRPVLLGISKRGDRHLR FT TLLVQGSRALMIRIERRDDALGQWVRDLLARKHPNKVACALANKLARIVWAVLRRGST FT YNASMI" FT misc_feature 6350647..6350846 FT /evidence=not_experimental FT /label=ISPsy7_downstream_200 FT /note="From model DC3000_ISPsy7_downstream_200.hmm" FT /E_value="2.6e-98" FT /gff_seqname=gi|28867243|ref|NC_004578.1| FT /gff_source=procmatch FT /score=324.200000 FT CDS 6354877..6355899 FT /gene="PSPTO5575" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58991.1" FT /db_xref="GI:28855933" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT /colour=178 58 238 FT MBL 6354877..6355899 FT /gene="PSPTO5575" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:11527916, and GP:17865160; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposase" FT /protein_id="AAO58991.1" FT /db_xref="GI:28855933" FT /translation="MLTQEQSVEIKVLARQGHGIKFIARELGISRNTVRKYLRKARSL FT PSDKVRPARPCKIDPFKDYLHERIEAARPHWIPATVLLREITALGYSGGVSRLKAYIR FT PFKRKAEEPVVRFETLPGKQIQVDFTTIRRGRQPLKAFVATLGFSRASFVRFSEREDS FT EAWLTGLREAFAYFGGVPEQALFDNAGTIITERDAFGEGQHRWHPRLAALADEFGFIP FT KVCRPYRAQTKGKVERFNGYLKGSFITPLAATLKSAGLTLDVVTANAHIGQWLDEVAH FT QRIHGTTGVQPAVRLAQEQQVLLPLPTQSLRPQPAQGLRLGRVLPYESLQHPLSVYEQ FT LLEVRA" FT CDS 6355896..6356705 FT /gene="PSPTO5576" FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58992.1" FT /db_xref="GI:28855934" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT /colour=178 58 238 FT MBL 6355896..6356705 FT /gene="PSPTO5576" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The annotation of this multicopy IS21 family FT element is based in part on an HMM match, the ISFinder FT database, and on positional information.; similar to FT GP:6009454, and GP:17865161; identified by sequence FT similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy4, transposition helper protein" FT /protein_id="AAO58992.1" FT /db_xref="GI:28855934" FT /translation="MNLQHARLTELCKGLKLERVGVDWPHLAQQAASGEDSFADFLEK FT LLAAETDARSERSRQALLKTAALPAVKTLEQYDFAFATGVPRAQLQELAALSFVGRAE FT NIVFLGPSGVGKSHLAIALAYRAVMAGIKTRFVTAADLMLQLTAAHRQERLKEYFSRV FT VMAPGLLVIDEIGYLPFGRDEANLFFNVVAKRYEQGSLILTSNLPFTQWAGTFADDQT FT LTAAMLDRLLHHAHIVQMTGESYRLKDKRKAGTKSSRAEPARKYEPEGGQN" FT CDS 6360062..6361039 FT /gene="PSPTO5582" FT /note="similar to GP:13094159, and GP:4514540; identified FT by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPssy, transposase" FT /protein_id="AAO58997.1" FT /db_xref="GI:28855939" FT /translation="MKQMTFADAEYAGKRKHTRRERFLIEMDQVVPWKGLIALIEPHY FT PKGEGGRPAYPLMAMLRIHLMQNWFGYSDPAMEEALYETTILRQFAGLSLDRIADETT FT ILNFRRLLEKHELAGGILQVINGYLGDRGLMLRQGTVVDATIIHAPSSTKNKDGKRDP FT EMHQTKKGNQYFFGMKAHIGVDAESGLVHSLVGTAANVADVTQVDQLLHGEETYVSGD FT AGYTGVDKRAEHQDRQMIWSIAARPSRYKKHGEKSLIARVYRKIEFTKAQLRAKVEHP FT FRVIKRQFGYTKVRFRGLAKNTAQQATLFALSNLWMVRKRLLAMGEVRL" FT /colour=178 58 238 FT MBL 6360062..6361039 FT /gene="PSPTO5582" FT /colour=178 58 238 FT CDS 6365506..6366504 FT /gene="PSPTO5586" FT /note="similar to SP:P39858, GB:J04970, SP:P14384, and FT PID:179932; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="capsular polysaccharide biosynthesis protein" FT /protein_id="NP_795306.1" FT /db_xref="GI:28872687" FT /translation="MTVLVTGAAGFIGFHVAKHLCEQGIEVVGIDNLNDYYSVELKHS FT RLAILERMPGFVFKRLDITDATGLSTLFEHNTFEQVIHLAAQAGVRYSMEQPDAYIQS FT NLVGFSNVLEACRQHRPSHLIYASSSSVYGANTRLPFRVEDAVDRPLSLYAATKRANE FT LAAYSYCHLYGLRATGLRFFTVYGPWGRPDMALFKFTQAMLREEPVDIYNHGEMARDF FT TYIDDIVESILRLRLRPPEPAGGEPAHQLFNIGRGQPVKLLEFVDCLEKALGLKAQRR FT YLPLQAGDVLQTWADVTALARWIDFQPHVSVDSGVSAFVEWYREHYQSGPPPLSLQ" FT /colour=0 255 0 FT CW_VIR_gene 6365506..6366504 FT /gene="PSPTO5586" FT /colour=0 255 0 FT CDS 6370444..6370803 FT /gene="PSPTO5590" FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO59005.1" FT /db_xref="GI:28855947" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT /colour=178 58 238 FT MBL 6370444..6370803 FT /gene="PSPTO5590" FT /colour=178 58 238 FT /colour=178 58 238 FT /note="The gene assignment is based on its position in a FT multicopy insertion sequence, directly adjacent to an ORF FT matching an HMM for the IS66 family.; similar to FT GP:8037784; identified by sequence similarity; putative" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, Orf1" FT /protein_id="AAO59005.1" FT /db_xref="GI:28855947" FT /translation="MMRPDAKVEKVYLYPKPVDFRKSIDGLAALVELDIKVAVFDPVL FT FVFLNKSRNRVKILYWERNGFCLWLKRLESERFKISPDDVDEAIVLTVQELNWLLDGF FT DLWRNRPHKILTPRFVA" FT CDS 6370821..6372374 FT /gene="PSPTO5591" FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO59006.1" FT /db_xref="GI:28855948" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT /colour=178 58 238 FT MBL 6370821..6372374 FT /gene="PSPTO5591" FT /colour=178 58 238 FT /colour=178 58 238 FT /codon_start=1 FT /transl_table=11 FT /product="ISPsy5, transposase" FT /protein_id="AAO59006.1" FT /db_xref="GI:28855948" FT /translation="MRPLPDNLPDDPVLLKQMLLESYEARSREQEVKDAYATHIVDLK FT EQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEEVVAPAPRRGKRK FT PLSADLPRIEVIHELPEHELTCACGCRKHVVSEETSEQLDIVPMQIRVIKHIRKVYGC FT RGCESAPVTAGKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQ FT TLARWIIQCGEHLQPLLNLMRDRLLESPVIHCDETRVQVLKEPDRDPTSQSWMWVQAS FT GPPDHKVVLFDYTSSRAQDVPLRLLESYRGYVMTDDYAGYNALALQPGVERLACMAHA FT RRKFVEAQKVQPKGKTGRADIALTMINKLYGIERELKDGSDEQRFTGRQEKSLPILAQ FT LKSWLDKTQSHVTPQSVLGKAVGYLANNWSRLKRYVEAGFLPIDNNPAERAIKPFVIG FT RKAWLFSDTPKGATASAQIYSLVETAKVNGQEPYTWLRHVLERLPLAQSVADYEALLP FT WNCSPEMPR" FT gene complement(6374081..6374518) FT /locus_tag="PSPTO_5593" FT /old_locus_tag="PSPTO5593" FT /note="This region contains a match to at least one other FT gene that is not full length,and is not the result of a FT sequencing artifact; transposition protein, TnsC-related FT protein, truncation; similar to SP:P05846; identified by FT sequence similarity; putative" FT /colour=178 58 238 FT gene complement(6374515..6376038) FT /locus_tag="PSPTO_5594" FT /old_locus_tag="PSPTO5594" FT /note="This region contains a match to at least one other FT gene that is not full length,and is not the result of a FT sequencing artifact; transposase, TnsB-related protein, FT truncation; similar to SP:P13989, GB:M27382, PID:1552513, FT PID:292777, PID:37647, PID:493024, PID:563891, and FT PID:975609; identified by sequence similarity; putative" FT /colour=178 58 238 FT VR_#121 6390479..6396730 FT /colour=255 255 0